Wall clock time and date at job start Thu Mar 4 2021 17:16:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 N 1.28469 * 124.88234 * 2 1 4 4 C 1.31805 * 110.07181 * 180.02562 * 3 2 1 5 5 C 1.47714 * 126.51934 * 179.97438 * 4 3 2 6 6 O 1.21561 * 120.00100 * 180.02562 * 5 4 3 7 7 N 1.34775 * 119.99409 * 0.02622 * 5 4 3 8 8 C 1.46503 * 119.99415 * 179.97438 * 7 5 4 9 9 H 1.08999 * 112.85173 * 336.19411 * 8 7 5 10 10 C 1.53789 * 113.61438 * 107.50211 * 8 7 5 11 11 C 1.53779 * 87.07946 * 139.97924 * 10 8 7 12 12 H 1.09004 * 113.69085 * 220.00995 * 11 10 8 13 13 O 1.42898 * 113.61251 * 89.11885 * 11 10 8 14 14 C 1.42906 * 113.99821 * 112.50258 * 13 11 10 15 15 C 1.52997 * 109.47321 * 59.99868 * 14 13 11 16 16 C 1.52992 * 109.46831 * 299.99483 * 14 13 11 17 17 C 1.53006 * 109.46748 * 179.97438 * 14 13 11 18 18 C 1.53777 * 87.08317 * 334.56904 * 11 10 8 19 19 C 1.41510 * 106.96423 * 0.22688 * 4 3 2 20 20 C 1.35031 * 124.88399 * 180.02562 * 2 1 3 21 21 C 1.50703 * 126.38652 * 359.95863 * 20 2 1 22 22 O 1.42899 * 109.46859 * 30.00178 * 21 20 2 23 23 Si 1.86300 * 109.46910 * 150.00497 * 21 20 2 24 24 H 1.08994 * 109.47660 * 90.02445 * 1 2 3 25 25 H 1.09008 * 109.46891 * 210.02577 * 1 2 3 26 26 H 1.09001 * 109.47264 * 330.01801 * 1 2 3 27 27 H 0.97000 * 120.00807 * 359.97438 * 7 5 4 28 28 H 1.09004 * 113.60743 * 25.43304 * 10 8 7 29 29 H 1.08996 * 113.61299 * 254.52768 * 10 8 7 30 30 H 1.09002 * 109.47153 * 299.99798 * 15 14 13 31 31 H 1.09001 * 109.46832 * 179.97438 * 15 14 13 32 32 H 1.09004 * 109.47261 * 59.99970 * 15 14 13 33 33 H 1.09001 * 109.47066 * 180.02562 * 16 14 13 34 34 H 1.08996 * 109.47747 * 300.00121 * 16 14 13 35 35 H 1.09002 * 109.47103 * 60.00533 * 16 14 13 36 36 H 1.08993 * 109.46955 * 299.99993 * 17 14 13 37 37 H 1.09000 * 109.47050 * 59.99822 * 17 14 13 38 38 H 1.09001 * 109.47002 * 179.97438 * 17 14 13 39 39 H 1.08998 * 113.61572 * 139.98274 * 18 11 10 40 40 H 1.09003 * 113.61283 * 270.79605 * 18 11 10 41 41 H 1.07992 * 127.24599 * 179.75233 * 19 4 3 42 42 H 1.08995 * 109.47010 * 269.99972 * 21 20 2 43 43 H 0.96697 * 113.99650 * 60.00523 * 22 21 20 44 44 H 1.48496 * 110.00254 * 58.67779 * 23 21 20 45 45 H 1.48502 * 109.99804 * 180.02562 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4740 0.7169 -0.0006 5 6 4.6273 1.6399 -0.0013 6 8 5.7596 1.1978 -0.0022 7 7 4.4240 2.9722 -0.0009 8 6 5.5678 3.8876 -0.0010 9 1 6.4726 3.4345 0.4040 10 6 5.7835 4.6038 -1.3448 11 6 6.1142 5.8652 -0.5298 12 1 5.7050 6.7815 -0.9555 13 8 7.4973 5.9808 -0.1897 14 6 8.1662 7.0653 -0.8366 15 6 7.4941 8.3837 -0.4481 16 6 8.0882 6.8807 -2.3534 17 6 9.6325 7.0930 -0.4005 18 6 5.2510 5.2695 0.5948 19 6 3.5272 -0.6971 -0.0063 20 6 2.2373 -1.1077 -0.0005 21 6 1.7534 -2.5349 -0.0003 22 8 0.4951 -2.6113 -0.6732 23 14 2.9941 -3.6114 -0.8791 24 1 -0.3634 -0.0004 -1.0276 25 1 -0.3633 -0.8898 0.5143 26 1 -0.3634 0.8901 0.5136 27 1 3.5204 3.3251 -0.0005 28 1 4.8759 4.6949 -1.9415 29 1 6.6290 4.2179 -1.9144 30 1 6.4494 8.3642 -0.7584 31 1 8.0046 9.2109 -0.9412 32 1 7.5497 8.5152 0.6326 33 1 8.5987 7.7076 -2.8468 34 1 8.5670 5.9415 -2.6302 35 1 7.0434 6.8612 -2.6637 36 1 9.6877 7.2247 0.6800 37 1 10.1116 6.1538 -0.6770 38 1 10.1429 7.9200 -0.8943 39 1 5.6665 5.4210 1.5911 40 1 4.1981 5.5439 0.5291 41 1 4.4108 -1.3180 -0.0120 42 1 1.6373 -2.8790 1.0274 43 1 0.5236 -2.3199 -1.5948 44 1 4.3152 -3.5158 -0.2078 45 1 2.5283 -5.0214 -0.8863 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12113340_13259642.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:16:55 Heat of formation + Delta-G solvation = -4.713024 kcal Electronic energy + Delta-G solvation = -25934.466745 eV Core-core repulsion = 22149.686831 eV Total energy + Delta-G solvation = -3784.779914 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.173 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -43.87553 -41.34770 -40.13877 -38.17643 -38.00611 -34.87270 -34.34144 -33.31946 -32.51717 -28.75068 -28.38389 -28.34446 -26.90184 -26.65897 -25.68561 -23.73158 -22.22580 -21.77461 -20.97926 -20.15678 -19.07410 -18.05931 -17.62283 -17.56590 -17.06429 -16.86505 -16.53747 -16.07753 -15.91350 -15.70448 -15.55686 -15.24071 -15.04887 -14.85097 -14.34004 -14.16319 -14.02453 -13.63316 -13.48239 -13.45569 -13.43337 -13.04527 -12.88420 -12.74702 -12.65678 -12.62971 -12.54856 -12.38452 -11.95218 -11.87273 -11.72290 -11.35388 -11.06202 -10.94029 -10.45646 -10.30957 -10.01761 -9.98403 -4.98467 0.39947 0.77766 1.18084 1.53270 1.70109 1.96101 2.10925 2.23891 2.57099 3.16823 3.29737 3.33686 3.47223 3.57680 3.79920 3.91066 3.97471 3.98250 4.03612 4.12459 4.26364 4.29404 4.34806 4.41436 4.47929 4.58558 4.64761 4.66539 4.67767 4.74248 4.75637 4.78871 4.82301 4.90600 4.92719 4.95971 5.02718 5.09508 5.17341 5.20397 5.34222 5.35851 5.45478 5.65836 6.35917 6.38844 6.56305 6.79558 7.08599 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.076 3.924 2 N -0.257 5.257 3 N -0.258 5.258 4 C -0.038 4.038 5 C 0.601 3.399 6 O -0.573 6.573 7 N -0.694 5.694 8 C 0.121 3.879 9 H 0.089 0.911 10 C -0.163 4.163 11 C 0.068 3.932 12 H 0.103 0.897 13 O -0.377 6.377 14 C 0.099 3.901 15 C -0.176 4.176 16 C -0.174 4.174 17 C -0.141 4.141 18 C -0.135 4.135 19 C -0.200 4.200 20 C -0.005 4.005 21 C -0.033 4.033 22 O -0.542 6.542 23 Si 0.787 3.213 24 H 0.111 0.889 25 H 0.115 0.885 26 H 0.100 0.900 27 H 0.417 0.583 28 H 0.109 0.891 29 H 0.062 0.938 30 H 0.067 0.933 31 H 0.078 0.922 32 H 0.059 0.941 33 H 0.077 0.923 34 H 0.053 0.947 35 H 0.064 0.936 36 H 0.058 0.942 37 H 0.054 0.946 38 H 0.086 0.914 39 H 0.077 0.923 40 H 0.123 0.877 41 H 0.158 0.842 42 H 0.128 0.872 43 H 0.398 0.602 44 H -0.294 1.294 45 H -0.280 1.280 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.795 3.221 -3.765 8.410 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.047 5.047 3 N -0.096 5.096 4 C -0.196 4.196 5 C 0.387 3.613 6 O -0.451 6.451 7 N -0.344 5.344 8 C 0.016 3.984 9 H 0.107 0.893 10 C -0.202 4.202 11 C 0.009 3.991 12 H 0.120 0.880 13 O -0.297 6.297 14 C 0.061 3.939 15 C -0.233 4.233 16 C -0.232 4.232 17 C -0.198 4.198 18 C -0.173 4.173 19 C -0.228 4.228 20 C -0.131 4.131 21 C -0.145 4.145 22 O -0.349 6.349 23 Si 0.691 3.309 24 H 0.129 0.871 25 H 0.134 0.866 26 H 0.119 0.881 27 H 0.254 0.746 28 H 0.127 0.873 29 H 0.081 0.919 30 H 0.086 0.914 31 H 0.097 0.903 32 H 0.078 0.922 33 H 0.096 0.904 34 H 0.072 0.928 35 H 0.083 0.917 36 H 0.077 0.923 37 H 0.073 0.927 38 H 0.105 0.895 39 H 0.096 0.904 40 H 0.141 0.859 41 H 0.175 0.825 42 H 0.145 0.855 43 H 0.249 0.751 44 H -0.221 1.221 45 H -0.206 1.206 Dipole moment (debyes) X Y Z Total from point charges -6.406 2.841 -3.003 7.624 hybrid contribution 0.216 -0.282 0.591 0.689 sum -6.190 2.559 -2.412 7.120 Atomic orbital electron populations 1.22689 0.70183 1.06607 1.06696 1.45741 1.09131 1.01597 1.48210 1.73461 1.02338 1.14656 1.19129 1.21717 0.91006 0.94108 1.12721 1.17161 0.86350 0.82438 0.75349 1.90786 1.24267 1.77899 1.52152 1.45770 1.10894 1.04479 1.73295 1.22541 0.89357 0.88412 0.98082 0.89292 1.23994 1.02783 0.96572 0.96885 1.22816 0.82466 0.97662 0.96141 0.87955 1.87977 1.21743 1.51363 1.68583 1.21718 0.93349 0.86550 0.92301 1.22441 1.01551 0.96902 1.02404 1.22447 1.02902 1.02737 0.95075 1.21807 0.93058 1.02808 1.02114 1.23623 1.01545 0.92759 0.99415 1.21620 0.97377 0.93809 1.09971 1.22116 0.90512 0.92346 1.08091 1.24776 0.94659 0.91918 1.03120 1.86478 1.28675 1.89008 1.30787 0.93191 0.73435 0.75666 0.88638 0.87067 0.86641 0.88148 0.74555 0.87257 0.91875 0.91368 0.90334 0.92177 0.90401 0.92832 0.91664 0.92273 0.92732 0.89488 0.90408 0.85919 0.82451 0.85468 0.75093 1.22081 1.20618 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.62 10.12 127.77 1.29 0.67 16 2 N -0.26 0.02 3.70 -355.92 -1.32 -1.30 16 3 N -0.26 -1.15 11.67 -48.17 -0.56 -1.71 16 4 C -0.04 -0.32 7.13 42.46 0.30 -0.02 16 5 C 0.60 6.92 7.82 86.75 0.68 7.59 16 6 O -0.57 -11.07 16.52 -3.91 -0.06 -11.14 16 7 N -0.69 -3.35 5.35 -443.03 -2.37 -5.72 16 8 C 0.12 0.59 4.17 45.52 0.19 0.78 16 9 H 0.09 1.04 7.46 -2.39 -0.02 1.02 16 10 C -0.16 -0.29 7.71 31.12 0.24 -0.05 16 11 C 0.07 0.02 2.88 31.12 0.09 0.11 16 12 H 0.10 -0.35 5.54 -2.39 -0.01 -0.37 16 13 O -0.38 -1.94 9.92 -148.98 -1.48 -3.42 16 14 C 0.10 0.11 1.11 -10.79 -0.01 0.10 16 15 C -0.18 0.35 8.38 71.98 0.60 0.95 16 16 C -0.17 0.10 8.38 71.98 0.60 0.70 16 17 C -0.14 -0.14 8.84 71.98 0.64 0.50 16 18 C -0.14 0.08 7.66 31.12 0.24 0.32 16 19 C -0.20 -1.29 9.35 22.41 0.21 -1.08 16 20 C -0.01 0.00 6.18 41.40 0.26 0.25 16 21 C -0.03 0.13 2.88 71.24 0.20 0.34 16 22 O -0.54 3.93 10.40 -148.98 -1.55 2.38 16 23 Si 0.79 -2.34 31.36 68.60 2.15 -0.19 16 24 H 0.11 -1.38 8.14 -2.39 -0.02 -1.40 16 25 H 0.12 -1.05 6.77 -2.38 -0.02 -1.07 16 26 H 0.10 -0.91 8.14 -2.39 -0.02 -0.93 16 27 H 0.42 0.01 8.45 -92.71 -0.78 -0.77 16 28 H 0.11 -0.21 8.14 -2.39 -0.02 -0.22 16 29 H 0.06 0.35 8.14 -2.39 -0.02 0.33 16 30 H 0.07 -0.24 6.24 -2.39 -0.01 -0.26 16 31 H 0.08 -0.31 8.14 -2.39 -0.02 -0.33 16 32 H 0.06 -0.04 8.14 -2.38 -0.02 -0.05 16 33 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 34 H 0.05 0.11 8.14 -2.39 -0.02 0.09 16 35 H 0.06 -0.11 7.02 -2.39 -0.02 -0.13 16 36 H 0.06 0.11 8.14 -2.39 -0.02 0.10 16 37 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 38 H 0.09 -0.21 8.14 -2.39 -0.02 -0.23 16 39 H 0.08 0.11 8.14 -2.39 -0.02 0.09 16 40 H 0.12 -0.71 8.12 -2.39 -0.02 -0.73 16 41 H 0.16 1.15 6.83 -2.91 -0.02 1.13 16 42 H 0.13 -0.51 7.96 -2.39 -0.02 -0.53 16 43 H 0.40 -5.73 8.70 -74.06 -0.64 -6.38 16 44 H -0.29 -1.32 6.83 99.48 0.68 -0.64 16 45 H -0.28 -0.65 7.11 99.48 0.71 0.06 16 Total: 0.00 -21.20 366.30 -0.07 -21.26 By element: Atomic # 1 Polarization: -10.91 SS G_CDS: -0.41 Total: -11.33 kcal Atomic # 6 Polarization: 5.62 SS G_CDS: 5.53 Total: 11.15 kcal Atomic # 7 Polarization: -4.48 SS G_CDS: -4.25 Total: -8.73 kcal Atomic # 8 Polarization: -9.08 SS G_CDS: -3.09 Total: -12.17 kcal Atomic # 14 Polarization: -2.34 SS G_CDS: 2.15 Total: -0.19 kcal Total: -21.20 -0.07 -21.26 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12113340_13259642.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.550 kcal (2) G-P(sol) polarization free energy of solvation -21.197 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.647 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.066 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.263 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.713 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds