Wall clock time and date at job start Thu Mar 4 2021 17:27:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34231 * 116.99870 * 2 1 4 4 O 1.20827 * 120.00075 * 359.97438 * 3 2 1 5 5 C 1.50703 * 120.00088 * 180.02562 * 3 2 1 6 6 H 1.09003 * 112.84709 * 311.19952 * 5 3 2 7 7 C 1.54053 * 113.69558 * 82.46352 * 5 3 2 8 8 C 1.53777 * 86.98580 * 139.98831 * 7 5 3 9 9 H 1.08992 * 113.62094 * 219.98074 * 8 7 5 10 10 N 1.46504 * 113.61206 * 89.16119 * 8 7 5 11 11 C 1.34775 * 120.00074 * 105.86351 * 10 8 7 12 12 O 1.21594 * 119.99818 * 0.02562 * 11 10 8 13 13 C 1.47572 * 120.00355 * 180.02562 * 11 10 8 14 14 C 1.36494 * 120.01144 * 179.97438 * 13 11 10 15 15 N 1.35944 * 120.50479 * 179.97438 * 14 13 11 16 16 C 1.37009 * 132.41027 * 180.02562 * 15 14 13 17 17 C 1.50699 * 126.43025 * 359.96487 * 16 15 14 18 18 O 1.42901 * 109.46830 * 330.00056 * 17 16 15 19 19 Si 1.86298 * 109.46950 * 210.00494 * 17 16 15 20 20 C 1.35003 * 107.13939 * 180.23027 * 16 15 14 21 21 N 1.33591 * 108.65702 * 359.63013 * 20 16 15 22 22 C 1.32413 * 109.22248 * 0.37952 * 21 20 16 23 23 C 1.41250 * 132.11714 * 179.77517 * 22 21 20 24 24 Br 1.89098 * 120.25397 * 359.97080 * 23 22 21 25 25 C 1.35703 * 119.48682 * 179.97438 * 23 22 21 26 26 C 1.53777 * 113.61623 * 179.97438 * 5 3 2 27 27 H 1.08994 * 109.47448 * 59.99992 * 1 2 3 28 28 H 1.09003 * 109.47143 * 180.02562 * 1 2 3 29 29 H 1.09004 * 109.47184 * 299.99747 * 1 2 3 30 30 H 1.09008 * 113.60680 * 25.48757 * 7 5 3 31 31 H 1.08994 * 113.69678 * 254.51299 * 7 5 3 32 32 H 0.97002 * 120.00250 * 285.86922 * 10 8 7 33 33 H 1.07999 * 119.74856 * 359.96244 * 14 13 11 34 34 H 1.08991 * 109.47351 * 90.00204 * 17 16 15 35 35 H 0.96708 * 114.00246 * 299.99864 * 18 17 16 36 36 H 1.48506 * 109.99834 * 180.02562 * 19 17 16 37 37 H 1.48502 * 110.00011 * 301.31529 * 19 17 16 38 38 H 1.08004 * 125.67508 * 179.73803 * 20 16 15 39 39 H 1.08001 * 120.23074 * 179.97438 * 25 23 22 40 40 H 1.08998 * 113.61260 * 105.38832 * 26 5 3 41 41 H 1.09000 * 113.61521 * 334.48689 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0239 0.6362 0.7549 7 6 4.1937 1.1229 -1.3993 8 6 5.1819 2.2266 -0.9870 9 1 5.3988 2.9384 -1.7834 10 7 6.3907 1.7179 -0.3339 11 6 7.5614 1.7023 -1.0013 12 8 7.6146 2.1109 -2.1453 13 6 8.7789 1.1894 -0.3438 14 6 9.9646 1.1731 -1.0197 15 7 11.0924 0.7033 -0.4235 16 6 12.3846 0.5763 -0.8609 17 6 12.9107 0.9575 -2.2207 18 8 11.8722 0.8110 -3.1913 19 14 14.3390 -0.1521 -2.6673 20 6 13.0969 0.0400 0.1528 21 7 12.2808 -0.1545 1.1925 22 6 11.0586 0.2372 0.8666 23 6 9.8428 0.2439 1.5855 24 35 9.7839 -0.3964 3.3638 25 6 8.7174 0.7135 0.9901 26 6 4.1077 2.7143 -0.0011 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8900 30 1 3.5270 1.4147 -2.2109 31 1 4.6651 0.1542 -1.5650 32 1 6.3484 1.3922 0.5788 33 1 10.0072 1.5360 -2.0360 34 1 13.2475 1.9939 -2.2025 35 1 11.5237 -0.0883 -3.2620 36 1 14.8672 0.2141 -4.0061 37 1 15.4127 -0.0329 -1.6483 38 1 14.1515 -0.1915 0.1281 39 1 7.7812 0.7238 1.5285 40 1 4.5098 3.0298 0.9615 41 1 3.4176 3.4402 -0.4312 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12121848_12335884.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:27:12 Heat of formation + Delta-G solvation = -14.714080 kcal Electronic energy + Delta-G solvation = -29836.337676 eV Core-core repulsion = 25346.332184 eV Total energy + Delta-G solvation = -4490.005492 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.036 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -44.26749 -42.06847 -41.15024 -39.44745 -38.39073 -37.96344 -37.43270 -35.41130 -34.50280 -32.47795 -31.78769 -30.24993 -29.41111 -27.22642 -26.85923 -26.82069 -25.45805 -24.08698 -22.74542 -22.48824 -22.04286 -20.48135 -19.62256 -18.94077 -18.51267 -18.19858 -17.86824 -17.68990 -17.49147 -17.39278 -16.89940 -16.25430 -16.21127 -16.00136 -15.77765 -15.62507 -15.20004 -15.08843 -14.81208 -14.67124 -14.27488 -14.05360 -13.74053 -13.46975 -13.39629 -13.33055 -13.13371 -13.00903 -12.84539 -12.67436 -12.14659 -11.86708 -11.82312 -11.74598 -11.54352 -11.37653 -11.36439 -11.32993 -11.25684 -10.88690 -10.30632 -10.02193 -9.08456 -4.95042 -0.89197 -0.36587 0.21411 0.97028 1.08145 1.12377 1.41051 1.66243 1.74918 1.78834 1.87973 2.00468 2.23158 2.81434 3.07290 3.17832 3.24551 3.32852 3.36631 3.47750 3.48572 3.67296 3.78504 3.84938 4.08689 4.12017 4.25160 4.27172 4.29501 4.35143 4.42298 4.50395 4.51877 4.66473 4.70051 4.73033 4.80386 4.92009 4.96275 5.00579 5.26680 5.36960 5.41982 5.57580 6.29183 6.43237 6.51836 6.67377 6.96732 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.467 3.533 4 O -0.539 6.539 5 C -0.108 4.108 6 H 0.155 0.845 7 C -0.127 4.127 8 C 0.125 3.875 9 H 0.103 0.897 10 N -0.689 5.689 11 C 0.585 3.415 12 O -0.560 6.560 13 C -0.167 4.167 14 C 0.162 3.838 15 N -0.356 5.356 16 C -0.080 4.080 17 C -0.043 4.043 18 O -0.553 6.553 19 Si 0.804 3.196 20 C 0.035 3.965 21 N -0.495 5.495 22 C 0.228 3.772 23 C -0.081 4.081 24 Br 0.004 6.996 25 C -0.021 4.021 26 C -0.119 4.119 27 H 0.059 0.941 28 H 0.127 0.873 29 H 0.061 0.939 30 H 0.094 0.906 31 H 0.096 0.904 32 H 0.418 0.582 33 H 0.194 0.806 34 H 0.120 0.880 35 H 0.396 0.604 36 H -0.288 1.288 37 H -0.268 1.268 38 H 0.207 0.793 39 H 0.188 0.812 40 H 0.105 0.895 41 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.667 -4.243 0.196 4.563 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.312 3.688 4 O -0.429 6.429 5 C -0.127 4.127 6 H 0.173 0.827 7 C -0.166 4.166 8 C 0.020 3.980 9 H 0.121 0.879 10 N -0.341 5.341 11 C 0.371 3.629 12 O -0.439 6.439 13 C -0.175 4.175 14 C 0.035 3.965 15 N -0.029 5.029 16 C -0.192 4.192 17 C -0.152 4.152 18 O -0.360 6.360 19 Si 0.705 3.295 20 C -0.115 4.115 21 N -0.213 5.213 22 C -0.018 4.018 23 C -0.164 4.164 24 Br 0.090 6.910 25 C -0.047 4.047 26 C -0.156 4.156 27 H 0.078 0.922 28 H 0.145 0.855 29 H 0.080 0.920 30 H 0.112 0.888 31 H 0.114 0.886 32 H 0.257 0.743 33 H 0.211 0.789 34 H 0.137 0.863 35 H 0.246 0.754 36 H -0.214 1.214 37 H -0.193 1.193 38 H 0.223 0.777 39 H 0.205 0.795 40 H 0.123 0.877 41 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -0.630 -3.652 0.504 3.740 hybrid contribution -0.806 1.094 -0.376 1.410 sum -1.437 -2.558 0.128 2.937 Atomic orbital electron populations 1.23505 0.75245 1.05520 1.02368 1.86521 1.24595 1.33320 1.83492 1.24189 0.92815 0.80926 0.70915 1.90679 1.67998 1.37484 1.46746 1.22896 0.85604 1.01622 1.02556 0.82736 1.23419 0.97378 1.01276 0.94529 1.21738 0.83189 0.96461 0.96639 0.87936 1.45342 1.06680 1.64047 1.18051 1.17491 0.82836 0.77483 0.85047 1.90869 1.85970 1.48430 1.18647 1.19195 0.93642 1.09205 0.95442 1.22275 0.83101 0.91206 0.99896 1.42704 1.07973 1.40060 1.12194 1.22334 0.82379 1.13209 1.01236 1.25142 1.00077 1.08749 0.81231 1.86487 1.54688 1.36751 1.58091 0.93090 0.72976 0.86234 0.77174 1.22837 1.01103 0.99613 0.87902 1.70829 0.98704 1.22995 1.28817 1.20722 0.95093 1.02363 0.83579 1.20570 0.91853 1.08981 0.94982 1.96851 1.98659 1.86425 1.09095 1.21383 0.98522 0.92323 0.92493 1.23296 0.96161 0.94607 1.01585 0.92203 0.85477 0.92047 0.88778 0.88575 0.74294 0.78901 0.86298 0.75387 1.21449 1.19334 0.77670 0.79454 0.87687 0.88171 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 10.56 113.37 1.20 1.13 16 2 O -0.36 -0.25 10.57 -51.42 -0.54 -0.79 16 3 C 0.47 0.53 7.49 71.24 0.53 1.06 16 4 O -0.54 -4.26 15.65 21.96 0.34 -3.91 16 5 C -0.11 0.72 4.15 -10.92 -0.05 0.67 16 6 H 0.16 -1.93 8.14 -2.39 -0.02 -1.95 16 7 C -0.13 0.79 7.45 31.21 0.23 1.03 16 8 C 0.13 -0.74 4.29 45.50 0.20 -0.55 16 9 H 0.10 -0.21 7.50 -2.39 -0.02 -0.23 16 10 N -0.69 5.40 5.22 -443.23 -2.31 3.08 16 11 C 0.58 -0.99 7.76 86.71 0.67 -0.32 16 12 O -0.56 -3.49 15.89 -4.01 -0.06 -3.56 16 13 C -0.17 0.47 5.84 -20.35 -0.12 0.35 16 14 C 0.16 -0.05 9.91 83.65 0.83 0.78 16 15 N -0.36 -0.61 2.93 -337.71 -0.99 -1.60 16 16 C -0.08 0.00 6.25 41.01 0.26 0.25 16 17 C -0.04 0.15 3.06 71.24 0.22 0.37 16 18 O -0.55 1.76 10.90 -148.98 -1.62 0.14 16 19 Si 0.80 -4.76 31.33 68.60 2.15 -2.61 16 20 C 0.03 0.07 10.44 83.68 0.87 0.94 16 21 N -0.49 -3.49 11.30 -194.10 -2.19 -5.69 16 22 C 0.23 1.05 7.59 134.19 1.02 2.07 16 23 C -0.08 -0.05 6.24 22.42 0.14 0.09 16 24 Br 0.00 0.00 33.72 -20.37 -0.69 -0.68 16 25 C -0.02 0.11 9.26 22.55 0.21 0.32 16 26 C -0.12 0.80 7.14 31.11 0.22 1.02 16 27 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 28 H 0.13 -0.97 8.14 -2.39 -0.02 -0.99 16 29 H 0.06 -0.11 8.13 -2.38 -0.02 -0.13 16 30 H 0.09 -0.43 8.10 -2.38 -0.02 -0.44 16 31 H 0.10 -0.69 8.14 -2.39 -0.02 -0.71 16 32 H 0.42 -5.89 6.74 -92.71 -0.62 -6.51 16 33 H 0.19 -0.01 6.19 -2.91 -0.02 -0.03 16 34 H 0.12 -0.34 7.96 -2.39 -0.02 -0.36 16 35 H 0.40 -3.99 8.70 -74.05 -0.64 -4.64 16 36 H -0.29 -0.30 7.11 99.48 0.71 0.41 16 37 H -0.27 0.71 6.80 99.48 0.68 1.39 16 38 H 0.21 -0.61 6.69 -2.91 -0.02 -0.63 16 39 H 0.19 -2.46 6.44 -2.91 -0.02 -2.48 16 40 H 0.10 -1.05 8.14 -2.39 -0.02 -1.07 16 41 H 0.10 -0.30 7.44 -2.39 -0.02 -0.31 16 Total: 0.00 -25.57 373.43 0.38 -25.19 By element: Atomic # 1 Polarization: -18.65 SS G_CDS: -0.13 Total: -18.78 kcal Atomic # 6 Polarization: 2.79 SS G_CDS: 6.43 Total: 9.22 kcal Atomic # 7 Polarization: 1.29 SS G_CDS: -5.50 Total: -4.21 kcal Atomic # 8 Polarization: -6.24 SS G_CDS: -1.89 Total: -8.12 kcal Atomic # 14 Polarization: -4.76 SS G_CDS: 2.15 Total: -2.61 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -0.69 Total: -0.68 kcal Total: -25.57 0.38 -25.19 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12121848_12335884.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.474 kcal (2) G-P(sol) polarization free energy of solvation -25.567 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.379 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.188 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.714 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds