Wall clock time and date at job start Thu Mar 4 2021 17:27:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34234 * 116.99919 * 2 1 4 4 O 1.20821 * 119.99564 * 0.02562 * 3 2 1 5 5 C 1.50690 * 120.00013 * 179.97438 * 3 2 1 6 6 H 1.09000 * 112.90879 * 48.75425 * 5 3 2 7 7 C 1.53786 * 113.61518 * 180.02562 * 5 3 2 8 8 C 1.53781 * 87.17350 * 140.02616 * 7 5 3 9 9 H 1.08998 * 113.61196 * 219.97759 * 8 7 5 10 10 N 1.46506 * 113.61613 * 89.15811 * 8 7 5 11 11 C 1.34774 * 119.99981 * 154.99882 * 10 8 7 12 12 O 1.21564 * 119.99936 * 0.02562 * 11 10 8 13 13 C 1.47706 * 119.99590 * 180.02562 * 11 10 8 14 14 N 1.31811 * 126.52118 * 0.02750 * 13 11 10 15 15 N 1.28471 * 110.06936 * 179.97438 * 14 13 11 16 16 C 1.46505 * 124.87978 * 179.97438 * 15 14 13 17 17 C 1.35026 * 110.23607 * 359.97438 * 15 14 13 18 18 C 1.50698 * 126.38833 * 180.02562 * 17 15 14 19 19 O 1.42904 * 109.47108 * 30.00363 * 18 17 15 20 20 Si 1.86298 * 109.47264 * 150.00223 * 18 17 15 21 21 C 1.35370 * 107.22753 * 359.76705 * 17 15 14 22 22 C 1.53781 * 87.08070 * 334.52830 * 8 7 5 23 23 H 1.08998 * 109.47143 * 299.99863 * 1 2 3 24 24 H 1.09005 * 109.46883 * 60.00147 * 1 2 3 25 25 H 1.09002 * 109.46788 * 179.97438 * 1 2 3 26 26 H 1.09002 * 113.61357 * 25.43533 * 7 5 3 27 27 H 1.09002 * 113.61608 * 254.61695 * 7 5 3 28 28 H 0.97003 * 119.99276 * 335.00814 * 10 8 7 29 29 H 1.09005 * 109.47147 * 90.02062 * 16 15 14 30 30 H 1.08994 * 109.47139 * 210.02068 * 16 15 14 31 31 H 1.09004 * 109.47227 * 330.02383 * 16 15 14 32 32 H 1.08998 * 109.47558 * 270.00955 * 18 17 15 33 33 H 0.96695 * 114.00124 * 179.97438 * 19 18 17 34 34 H 1.48498 * 110.00410 * 300.00475 * 20 18 17 35 35 H 1.48500 * 109.99802 * 61.32133 * 20 18 17 36 36 H 1.07997 * 127.24843 * 180.23774 * 21 17 15 37 37 H 1.09005 * 113.61471 * 139.98321 * 22 8 7 38 38 H 1.08996 * 113.61178 * 270.79663 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0249 0.6360 -0.7540 7 6 4.1077 2.7143 0.0011 8 6 5.1823 2.2287 0.9882 9 1 5.3976 2.9411 1.7845 10 7 6.3923 1.7218 0.3359 11 6 7.5689 1.7370 0.9930 12 8 7.6260 2.1709 2.1272 13 6 8.7888 1.2265 0.3351 14 7 8.8740 0.7307 -0.8832 15 7 10.0850 0.3826 -1.1338 16 6 10.5435 -0.2073 -2.3940 17 6 10.8744 0.6384 -0.0686 18 6 12.3545 0.3731 0.0315 19 8 12.9462 0.4792 -1.2649 20 14 13.1334 1.6219 1.1737 21 6 10.0895 1.1829 0.8905 22 6 4.1936 1.1250 1.3995 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 3.4171 3.4404 0.4300 27 1 4.5098 3.0300 -0.9616 28 1 6.3465 1.3755 -0.5690 29 1 10.8512 0.5858 -3.0756 30 1 11.3885 -0.8677 -2.1999 31 1 9.7317 -0.7786 -2.8444 32 1 12.5181 -0.6304 0.4244 33 1 13.9000 0.3207 -1.2761 34 1 12.9174 2.9942 0.6491 35 1 12.5491 1.5003 2.5335 36 1 10.3920 1.5124 1.8735 37 1 4.6650 0.1562 1.5653 38 1 3.5275 1.4161 2.2117 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12121848_13259642.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:27:17 Heat of formation + Delta-G solvation = -35.499555 kcal Electronic energy + Delta-G solvation = -23535.803702 eV Core-core repulsion = 19769.393308 eV Total energy + Delta-G solvation = -3766.410394 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.125 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -43.82324 -41.92911 -40.63717 -38.98967 -38.10876 -37.28105 -34.62453 -34.12892 -32.72454 -29.52876 -28.62501 -27.16703 -26.88535 -26.58841 -24.41072 -22.41732 -22.16414 -20.96946 -20.38080 -18.88678 -18.65933 -18.37071 -17.87591 -17.44446 -17.42163 -17.25265 -16.92418 -16.05198 -15.79481 -15.60421 -15.22388 -15.03004 -14.98645 -14.60839 -14.22582 -13.96397 -13.84911 -13.63234 -13.60657 -13.43169 -13.13937 -13.05089 -12.81583 -12.06662 -12.00065 -11.88252 -11.77217 -11.75245 -11.27839 -11.16397 -10.99727 -10.23740 -10.03257 -9.93217 -5.12261 0.51050 0.77253 1.15710 1.19179 1.51193 1.60328 1.74022 1.97121 2.04462 2.39704 2.86514 3.20528 3.25691 3.28827 3.44079 3.63796 3.74403 3.92581 4.00891 4.08231 4.18250 4.19260 4.26017 4.28173 4.42727 4.45811 4.48273 4.58015 4.62153 4.64636 4.69402 4.77310 4.82885 4.96549 5.24219 5.41661 5.48245 5.61681 6.26011 6.40606 6.76610 6.84127 7.20076 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.471 3.529 4 O -0.504 6.504 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.124 4.124 8 C 0.122 3.878 9 H 0.117 0.883 10 N -0.703 5.703 11 C 0.613 3.387 12 O -0.525 6.525 13 C -0.015 4.015 14 N -0.255 5.255 15 N -0.258 5.258 16 C 0.093 3.907 17 C 0.029 3.971 18 C -0.048 4.048 19 O -0.552 6.552 20 Si 0.715 3.285 21 C -0.185 4.185 22 C -0.131 4.131 23 H 0.064 0.936 24 H 0.064 0.936 25 H 0.103 0.897 26 H 0.114 0.886 27 H 0.086 0.914 28 H 0.409 0.591 29 H 0.088 0.912 30 H 0.105 0.895 31 H 0.091 0.909 32 H 0.087 0.913 33 H 0.392 0.608 34 H -0.251 1.251 35 H -0.249 1.249 36 H 0.164 0.836 37 H 0.088 0.912 38 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.899 -4.827 -3.153 8.249 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.313 3.687 4 O -0.391 6.391 5 C -0.133 4.133 6 H 0.143 0.857 7 C -0.162 4.162 8 C 0.016 3.984 9 H 0.134 0.866 10 N -0.354 5.354 11 C 0.397 3.603 12 O -0.398 6.398 13 C -0.174 4.174 14 N -0.093 5.093 15 N -0.046 5.046 16 C -0.046 4.046 17 C -0.096 4.096 18 C -0.158 4.158 19 O -0.359 6.359 20 Si 0.613 3.387 21 C -0.213 4.213 22 C -0.170 4.170 23 H 0.083 0.917 24 H 0.082 0.918 25 H 0.121 0.879 26 H 0.132 0.868 27 H 0.105 0.895 28 H 0.244 0.756 29 H 0.107 0.893 30 H 0.123 0.877 31 H 0.110 0.890 32 H 0.105 0.895 33 H 0.241 0.759 34 H -0.175 1.175 35 H -0.174 1.174 36 H 0.182 0.818 37 H 0.106 0.894 38 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 4.352 -3.687 -3.041 6.464 hybrid contribution -0.375 -0.442 -0.190 0.610 sum 3.977 -4.130 -3.231 6.581 Atomic orbital electron populations 1.23320 0.76006 1.03969 1.02709 1.86525 1.23688 1.33381 1.83811 1.23557 0.91643 0.81406 0.72063 1.90683 1.66959 1.36429 1.45047 1.22702 0.87597 1.01087 1.01871 0.85674 1.23363 0.96914 0.94806 1.01116 1.21816 0.83366 0.96484 0.96691 0.86557 1.45490 1.06879 1.64244 1.18820 1.16795 0.81232 0.77441 0.84805 1.90825 1.85396 1.46166 1.17454 1.21666 0.95207 1.08174 0.92369 1.73502 1.02924 1.15813 1.17014 1.45367 1.03683 1.42351 1.13222 1.22277 1.01465 0.99697 0.81202 1.20907 0.93276 1.05774 0.89601 1.24372 0.89017 1.09130 0.93312 1.86397 1.27572 1.94784 1.27192 0.95410 0.88306 0.77900 0.77088 1.21405 0.91680 1.06754 1.01440 1.23448 0.97763 1.01235 0.94543 0.91733 0.91762 0.87891 0.86808 0.89512 0.75576 0.89334 0.87663 0.88992 0.89533 0.75906 1.17517 1.17395 0.81828 0.89368 0.88157 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.07 16 2 O -0.36 -0.72 10.57 -39.27 -0.41 -1.14 16 3 C 0.47 1.12 7.49 36.00 0.27 1.39 16 4 O -0.50 -2.57 15.65 -18.75 -0.29 -2.87 16 5 C -0.11 0.03 4.15 -90.82 -0.38 -0.34 16 6 H 0.13 -0.24 8.14 -51.93 -0.42 -0.67 16 7 C -0.12 0.05 7.14 -25.92 -0.19 -0.14 16 8 C 0.12 0.06 4.32 -67.11 -0.29 -0.23 16 9 H 0.12 0.19 7.46 -51.93 -0.39 -0.20 16 10 N -0.70 -0.87 5.26 -54.00 -0.28 -1.15 16 11 C 0.61 2.70 7.82 -12.39 -0.10 2.60 16 12 O -0.53 -3.88 16.52 5.31 0.09 -3.80 16 13 C -0.02 -0.07 7.13 -82.77 -0.59 -0.66 16 14 N -0.26 -0.81 11.67 33.42 0.39 -0.42 16 15 N -0.26 -0.48 3.70 -63.85 -0.24 -0.72 16 16 C 0.09 -0.17 10.12 59.85 0.61 0.44 16 17 C 0.03 0.06 6.22 -82.21 -0.51 -0.46 16 18 C -0.05 0.10 2.87 36.00 0.10 0.20 16 19 O -0.55 1.81 10.38 -35.23 -0.37 1.45 16 20 Si 0.71 -1.52 31.30 -169.99 -5.32 -6.84 16 21 C -0.18 -0.70 9.35 -39.36 -0.37 -1.06 16 22 C -0.13 0.03 7.44 -25.78 -0.19 -0.16 16 23 H 0.06 0.00 8.13 -51.93 -0.42 -0.42 16 24 H 0.06 0.00 8.13 -51.93 -0.42 -0.42 16 25 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 26 H 0.11 0.05 7.43 -51.93 -0.39 -0.34 16 27 H 0.09 -0.10 8.14 -51.93 -0.42 -0.53 16 28 H 0.41 -0.16 8.43 -40.82 -0.34 -0.51 16 29 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.10 -0.34 6.77 -51.93 -0.35 -0.69 16 31 H 0.09 -0.27 8.14 -51.93 -0.42 -0.70 16 32 H 0.09 -0.34 7.96 -51.93 -0.41 -0.75 16 33 H 0.39 -3.21 8.74 45.56 0.40 -2.81 16 34 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 35 H -0.25 -0.17 6.94 56.52 0.39 0.22 16 36 H 0.16 0.56 6.90 -52.49 -0.36 0.20 16 37 H 0.09 -0.01 8.14 -51.93 -0.42 -0.43 16 38 H 0.10 -0.03 8.10 -51.93 -0.42 -0.45 16 LS Contribution 330.63 15.07 4.98 4.98 Total: 0.00 -10.85 330.63 -6.87 -17.73 By element: Atomic # 1 Polarization: -5.02 SS G_CDS: -4.86 Total: -9.88 kcal Atomic # 6 Polarization: 3.21 SS G_CDS: -0.56 Total: 2.64 kcal Atomic # 7 Polarization: -2.16 SS G_CDS: -0.13 Total: -2.29 kcal Atomic # 8 Polarization: -5.36 SS G_CDS: -0.99 Total: -6.35 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.32 Total: -6.84 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -10.85 -6.87 -17.73 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12121848_13259642.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.772 kcal (2) G-P(sol) polarization free energy of solvation -10.853 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.625 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.874 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.728 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.500 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds