Wall clock time and date at job start Thu Mar 4 2021 17:31:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28468 * 124.88473 * 2 1 4 4 C 1.31806 * 110.07239 * 179.88347 * 3 2 1 5 5 C 1.47712 * 126.51832 * 180.12896 * 4 3 2 6 6 O 1.21569 * 120.00462 * 180.28173 * 5 4 3 7 7 N 1.34777 * 119.99840 * 0.27934 * 5 4 3 8 8 C 1.46504 * 119.99673 * 179.97438 * 7 5 4 9 9 H 1.08994 * 112.85421 * 23.81169 * 8 7 5 10 10 C 1.53786 * 113.60911 * 155.00373 * 8 7 5 11 11 C 1.53789 * 87.07740 * 139.98154 * 10 8 7 12 12 H 1.09001 * 113.61126 * 220.01627 * 11 10 8 13 13 O 1.42895 * 113.61346 * 89.20229 * 11 10 8 14 14 C 1.53779 * 87.08400 * 334.56540 * 11 10 8 15 15 C 1.41505 * 106.96581 * 0.36293 * 4 3 2 16 16 C 1.35037 * 124.88768 * 180.29460 * 2 1 3 17 17 C 1.50702 * 126.38193 * 359.97438 * 16 2 1 18 18 O 1.42900 * 109.47334 * 329.99804 * 17 16 2 19 19 Si 1.86301 * 109.47112 * 209.99536 * 17 16 2 20 20 H 1.09002 * 109.47391 * 269.69947 * 1 2 3 21 21 H 1.09001 * 109.46813 * 149.70003 * 1 2 3 22 22 H 1.09004 * 109.47041 * 29.70130 * 1 2 3 23 23 H 0.97000 * 120.00194 * 0.02562 * 7 5 4 24 24 H 1.09002 * 113.61490 * 254.52595 * 10 8 7 25 25 H 1.08994 * 113.61513 * 25.35221 * 10 8 7 26 26 H 0.96700 * 113.99894 * 179.97438 * 13 11 10 27 27 H 1.09004 * 113.61148 * 270.88591 * 14 11 10 28 28 H 1.08996 * 113.61703 * 139.98244 * 14 11 10 29 29 H 1.08001 * 127.24825 * 179.79962 * 15 4 3 30 30 H 1.09002 * 109.46907 * 89.99751 * 17 16 2 31 31 H 0.96701 * 113.99926 * 299.99967 * 18 17 16 32 32 H 1.48496 * 109.99621 * 58.68185 * 19 17 16 33 33 H 1.48500 * 109.99879 * 180.02562 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0538 0.0000 4 6 3.4740 0.7169 0.0025 5 6 4.6273 1.6398 0.0060 6 8 5.7597 1.1977 0.0030 7 7 4.4241 2.9722 0.0126 8 6 5.5679 3.8875 0.0167 9 1 6.4724 3.4366 -0.3913 10 6 5.2506 5.2724 -0.5719 11 6 6.1147 5.8623 0.5552 12 1 5.7051 6.7755 0.9870 13 8 7.4972 5.9814 0.2140 14 6 5.7847 4.5967 1.3640 15 6 3.5272 -0.6972 -0.0043 16 6 2.2374 -1.1077 -0.0057 17 6 1.7534 -2.5349 -0.0125 18 8 0.4958 -2.6146 0.6613 19 14 2.9950 -3.6157 0.8599 20 1 -0.3634 -0.0054 1.0276 21 1 -0.3633 -0.8873 -0.5185 22 1 -0.3633 0.8927 -0.5092 23 1 3.5205 3.3250 0.0154 24 1 5.6654 5.4291 -1.5676 25 1 4.1974 5.5446 -0.5044 26 1 8.0458 6.3522 0.9188 27 1 4.8775 4.6849 1.9619 28 1 6.6304 4.2079 1.9310 29 1 4.4109 -1.3181 -0.0075 30 1 1.6363 -2.8739 -1.0418 31 1 0.5251 -2.3277 1.5843 32 1 3.1873 -3.1442 2.2548 33 1 2.5297 -5.0259 0.8595 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12122388_13259642.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:31:52 Heat of formation + Delta-G solvation = -6.780773 kcal Electronic energy + Delta-G solvation = -18704.197091 eV Core-core repulsion = 15541.477989 eV Total energy + Delta-G solvation = -3162.719103 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 254.110 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -43.86543 -41.13278 -39.57207 -38.17262 -36.27772 -34.54961 -33.80490 -32.54460 -28.69140 -26.92162 -26.78228 -25.70994 -23.68931 -22.20679 -21.27323 -20.68421 -19.20580 -18.44009 -17.66347 -17.60875 -17.19193 -17.03343 -16.28708 -16.00029 -15.73865 -15.59347 -15.35825 -14.87160 -14.46911 -14.10316 -13.77790 -13.57902 -13.48920 -13.40763 -13.17528 -12.69643 -12.33434 -12.26345 -12.01406 -11.47550 -11.35545 -11.09715 -10.77554 -10.31409 -10.00966 -9.99091 -4.89547 0.40383 0.80247 1.20607 1.53132 1.66465 1.93059 2.11313 2.25650 3.08202 3.11474 3.28636 3.33498 3.45524 3.68522 3.79897 3.97314 4.13385 4.28874 4.34244 4.41958 4.47061 4.55070 4.63600 4.66550 4.68793 4.81039 4.93855 4.98521 5.08446 5.22838 5.45778 5.65559 6.26843 6.36415 6.79292 6.86471 7.08649 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.264 5.264 3 N -0.264 5.264 4 C -0.041 4.041 5 C 0.602 3.398 6 O -0.569 6.569 7 N -0.697 5.697 8 C 0.117 3.883 9 H 0.092 0.908 10 C -0.134 4.134 11 C 0.085 3.915 12 H 0.100 0.900 13 O -0.574 6.574 14 C -0.178 4.178 15 C -0.188 4.188 16 C -0.012 4.012 17 C -0.043 4.043 18 O -0.537 6.537 19 Si 0.780 3.220 20 H 0.101 0.899 21 H 0.117 0.883 22 H 0.102 0.898 23 H 0.416 0.584 24 H 0.075 0.925 25 H 0.123 0.877 26 H 0.400 0.600 27 H 0.106 0.894 28 H 0.068 0.932 29 H 0.181 0.819 30 H 0.146 0.854 31 H 0.388 0.612 32 H -0.295 1.295 33 H -0.282 1.282 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.850 1.547 1.013 5.191 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.053 5.053 3 N -0.102 5.102 4 C -0.199 4.199 5 C 0.388 3.612 6 O -0.446 6.446 7 N -0.348 5.348 8 C 0.013 3.987 9 H 0.110 0.890 10 C -0.172 4.172 11 C 0.025 3.975 12 H 0.117 0.883 13 O -0.382 6.382 14 C -0.217 4.217 15 C -0.216 4.216 16 C -0.137 4.137 17 C -0.153 4.153 18 O -0.344 6.344 19 Si 0.683 3.317 20 H 0.119 0.881 21 H 0.135 0.865 22 H 0.121 0.879 23 H 0.253 0.747 24 H 0.094 0.906 25 H 0.141 0.859 26 H 0.251 0.749 27 H 0.124 0.876 28 H 0.087 0.913 29 H 0.198 0.802 30 H 0.164 0.836 31 H 0.238 0.762 32 H -0.222 1.222 33 H -0.209 1.209 Dipole moment (debyes) X Y Z Total from point charges -5.158 1.169 0.534 5.316 hybrid contribution -0.423 0.159 1.237 1.317 sum -5.581 1.328 1.772 6.004 Atomic orbital electron populations 1.22628 0.70625 1.06778 1.06100 1.45712 1.09032 1.01874 1.48708 1.73450 1.02631 1.14751 1.19350 1.21794 0.90857 0.94507 1.12741 1.17148 0.86410 0.82338 0.75343 1.90784 1.24014 1.77816 1.51976 1.45802 1.10854 1.04654 1.73457 1.22592 0.89508 0.88483 0.98162 0.89005 1.23502 1.01463 0.92814 0.99410 1.22547 0.82400 0.96800 0.95710 0.88251 1.86436 1.18985 1.87191 1.45623 1.24153 1.03238 0.97382 0.96917 1.21725 0.97527 0.93492 1.08835 1.22179 0.90909 0.92149 1.08501 1.24833 0.93434 0.91943 1.05131 1.86580 1.29244 1.88720 1.29878 0.93209 0.84039 0.74888 0.79571 0.88060 0.86505 0.87931 0.74685 0.90577 0.85884 0.74937 0.87579 0.91325 0.80197 0.83618 0.76183 1.22155 1.20868 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.53 10.12 127.77 1.29 0.76 16 2 N -0.26 -0.15 3.70 -355.92 -1.32 -1.46 16 3 N -0.26 -1.24 11.67 -48.17 -0.56 -1.80 16 4 C -0.04 -0.31 7.13 42.46 0.30 -0.01 16 5 C 0.60 6.20 7.82 86.75 0.68 6.88 16 6 O -0.57 -9.77 16.52 -3.93 -0.06 -9.84 16 7 N -0.70 -2.99 5.35 -443.01 -2.37 -5.36 16 8 C 0.12 0.46 4.18 45.52 0.19 0.65 16 9 H 0.09 0.94 7.46 -2.39 -0.02 0.92 16 10 C -0.13 0.14 7.66 31.12 0.24 0.38 16 11 C 0.09 -0.15 5.27 31.12 0.16 0.02 16 12 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 13 O -0.57 -0.90 13.59 -148.98 -2.03 -2.92 16 14 C -0.18 -0.02 7.71 31.12 0.24 0.22 16 15 C -0.19 -0.78 9.35 22.41 0.21 -0.57 16 16 C -0.01 0.00 6.18 41.40 0.26 0.25 16 17 C -0.04 0.19 2.87 71.24 0.20 0.39 16 18 O -0.54 2.53 10.40 -148.98 -1.55 0.98 16 19 Si 0.78 -2.55 31.23 68.60 2.14 -0.41 16 20 H 0.10 -1.00 8.14 -2.39 -0.02 -1.02 16 21 H 0.12 -0.96 6.77 -2.39 -0.02 -0.98 16 22 H 0.10 -0.84 8.14 -2.38 -0.02 -0.86 16 23 H 0.42 -0.01 8.45 -92.71 -0.78 -0.79 16 24 H 0.08 0.10 8.14 -2.39 -0.02 0.08 16 25 H 0.12 -0.74 8.12 -2.39 -0.02 -0.76 16 26 H 0.40 -2.71 9.12 -74.06 -0.68 -3.39 16 27 H 0.11 -0.29 8.14 -2.38 -0.02 -0.31 16 28 H 0.07 0.17 8.14 -2.39 -0.02 0.15 16 29 H 0.18 0.19 7.02 -2.91 -0.02 0.17 16 30 H 0.15 -1.06 7.96 -2.39 -0.02 -1.08 16 31 H 0.39 -3.54 8.70 -74.06 -0.64 -4.18 16 32 H -0.29 -0.97 7.11 99.48 0.71 -0.27 16 33 H -0.28 -0.66 7.11 99.48 0.71 0.05 16 Total: 0.00 -21.85 287.45 -2.87 -24.72 By element: Atomic # 1 Polarization: -12.00 SS G_CDS: -0.90 Total: -12.90 kcal Atomic # 6 Polarization: 5.21 SS G_CDS: 3.78 Total: 8.99 kcal Atomic # 7 Polarization: -4.37 SS G_CDS: -4.25 Total: -8.62 kcal Atomic # 8 Polarization: -8.14 SS G_CDS: -3.64 Total: -11.78 kcal Atomic # 14 Polarization: -2.55 SS G_CDS: 2.14 Total: -0.41 kcal Total: -21.85 -2.87 -24.72 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12122388_13259642.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.938 kcal (2) G-P(sol) polarization free energy of solvation -21.852 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.914 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.867 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.719 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.781 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds