Wall clock time and date at job start Thu Mar 4 2021 13:24:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86300 * 109.47446 * 2 1 4 4 C 1.50703 * 109.47170 * 120.00158 * 2 1 3 5 5 C 1.38400 * 119.82771 * 64.99729 * 4 2 1 6 6 C 1.37885 * 120.16969 * 180.02562 * 5 4 2 7 7 C 1.39834 * 119.82693 * 359.97438 * 6 5 4 8 8 C 1.47219 * 120.16882 * 179.97438 * 7 6 5 9 9 C 1.34811 * 119.99690 * 180.02562 * 8 7 6 10 10 C 1.46426 * 119.99827 * 180.02562 * 9 8 7 11 11 O 1.21703 * 119.99874 * 359.97438 * 10 9 8 12 12 N 1.34777 * 120.00047 * 179.72509 * 10 9 8 13 13 C 1.46504 * 119.99854 * 180.27524 * 12 10 9 14 14 C 1.52996 * 109.46681 * 179.97438 * 13 12 10 15 15 H 1.08996 * 112.84846 * 316.18937 * 14 13 12 16 16 C 1.53781 * 113.61817 * 87.50246 * 14 13 12 17 17 C 1.53779 * 87.08085 * 139.97548 * 16 14 13 18 18 H 1.08999 * 113.61153 * 89.11708 * 17 16 14 19 19 C 1.50700 * 113.68871 * 220.00475 * 17 16 14 20 20 C 1.38233 * 120.00014 * 37.27154 * 19 17 16 21 21 C 1.38233 * 119.99908 * 179.78803 * 20 19 17 22 22 C 1.38239 * 120.00164 * 0.43097 * 21 20 19 23 23 C 1.38236 * 119.99734 * 359.82273 * 22 21 20 24 24 C 1.38235 * 120.00282 * 359.96976 * 23 22 21 25 25 C 1.53778 * 87.08541 * 334.56866 * 17 16 14 26 26 C 1.39835 * 119.66404 * 0.27063 * 7 6 5 27 27 C 1.37895 * 119.81804 * 359.46980 * 26 7 6 28 28 H 0.96706 * 114.00011 * 300.00592 * 1 2 3 29 29 H 1.08997 * 109.47027 * 240.00120 * 2 1 3 30 30 H 1.48501 * 110.00103 * 178.68244 * 3 2 1 31 31 H 1.48506 * 110.00071 * 300.00340 * 3 2 1 32 32 H 1.08000 * 119.91060 * 0.02562 * 5 4 2 33 33 H 1.08006 * 120.09026 * 179.97438 * 6 5 4 34 34 H 1.07991 * 119.99792 * 359.97438 * 8 7 6 35 35 H 1.08002 * 119.99995 * 359.97438 * 9 8 7 36 36 H 0.97000 * 119.99736 * 0.26799 * 12 10 9 37 37 H 1.08998 * 109.46968 * 299.99782 * 13 12 10 38 38 H 1.08997 * 109.47198 * 59.99605 * 13 12 10 39 39 H 1.08992 * 113.61117 * 254.52551 * 16 14 13 40 40 H 1.08995 * 113.61123 * 25.42964 * 16 14 13 41 41 H 1.08004 * 119.99977 * 359.97438 * 20 19 17 42 42 H 1.08003 * 120.00047 * 180.27381 * 21 20 19 43 43 H 1.07995 * 120.00252 * 179.83287 * 22 21 20 44 44 H 1.08005 * 119.99884 * 179.97438 * 23 22 21 45 45 H 1.07995 * 120.00213 * 180.02562 * 24 23 22 46 46 H 1.08998 * 113.61548 * 270.88628 * 25 17 16 47 47 H 1.08993 * 113.61513 * 139.97786 * 25 17 16 48 48 H 1.07995 * 120.08805 * 179.70594 * 26 7 6 49 49 H 1.08009 * 119.91030 * 180.27684 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.6823 -2.0619 1.3949 6 6 2.1382 -2.7188 2.5182 7 6 2.8542 -2.0161 3.4923 8 6 3.3440 -2.7099 4.6949 9 6 4.0334 -2.0289 5.6321 10 6 4.5211 -2.7191 6.8279 11 8 4.3035 -3.9073 6.9759 12 7 5.2152 -2.0395 7.7622 13 6 5.7082 -2.7314 8.9557 14 6 6.4579 -1.7393 9.8470 15 1 7.1246 -1.0854 9.2849 16 6 5.5490 -0.9916 10.8369 17 6 6.6728 -1.1585 11.8732 18 1 7.3978 -0.3446 11.8658 19 6 6.1760 -1.4871 13.2575 20 6 5.0875 -2.3235 13.4207 21 6 4.6346 -2.6284 14.6906 22 6 5.2645 -2.0899 15.7971 23 6 6.3497 -1.2494 15.6336 24 6 6.8054 -0.9478 14.3639 25 6 7.1223 -2.3912 11.0712 26 6 3.0973 -0.6497 3.3214 27 6 2.6394 -0.0081 2.1900 28 1 -0.3933 0.4418 0.7650 29 1 1.7922 -0.5138 -0.8900 30 1 3.5346 1.7702 0.0321 31 1 1.5615 2.4679 -1.2085 32 1 1.1295 -2.6033 0.6414 33 1 1.9428 -3.7734 2.6455 34 1 3.1502 -3.7641 4.8266 35 1 4.2268 -0.9746 5.5005 36 1 5.3883 -1.0924 7.6443 37 1 4.8662 -3.1508 9.5064 38 1 6.3833 -3.5337 8.6578 39 1 5.3613 0.0455 10.5594 40 1 4.6383 -1.5348 11.0892 41 1 4.5929 -2.7410 12.5562 42 1 3.7869 -3.2854 14.8184 43 1 4.9089 -2.3260 16.7891 44 1 6.8417 -0.8283 16.4980 45 1 7.6535 -0.2915 14.2362 46 1 6.6417 -3.3169 11.3875 47 1 8.2047 -2.4837 10.9829 48 1 3.6454 -0.0993 4.0717 49 1 2.8302 1.0463 2.0543 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12130084_12360594.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:24:54 Heat of formation + Delta-G solvation = 25.690920 kcal Electronic energy + Delta-G solvation = -27845.528279 eV Core-core repulsion = 23897.781569 eV Total energy + Delta-G solvation = -3947.746710 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.167 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -41.29452 -40.76640 -40.34745 -38.92422 -37.77076 -35.63599 -35.05640 -32.36365 -32.14891 -31.76592 -31.29167 -28.99886 -26.96137 -26.59734 -24.91936 -24.06041 -23.58859 -23.45552 -21.96184 -21.86912 -20.55754 -19.96057 -18.79782 -18.15405 -17.84575 -17.29174 -16.83743 -16.58426 -16.48646 -16.26791 -16.15275 -15.97133 -15.62683 -15.39102 -15.12898 -14.85689 -14.64437 -14.52622 -14.40582 -14.20854 -14.14693 -13.94987 -13.77418 -13.37284 -13.28486 -13.04446 -13.02424 -12.65866 -12.32656 -12.25006 -12.05681 -12.01976 -11.72074 -11.47465 -11.39834 -11.34522 -11.24716 -10.94003 -10.43346 -10.13402 -9.98194 -9.81958 -9.53656 -9.23792 -4.99816 -0.54648 0.39642 0.44349 0.50007 0.89363 1.31190 1.64620 1.97960 2.20494 2.24764 2.82011 2.84947 3.47791 3.54815 3.59998 3.61012 3.67651 3.74487 3.83649 3.95413 4.00065 4.06269 4.12258 4.17263 4.20775 4.22083 4.28085 4.32885 4.36097 4.43413 4.49232 4.53201 4.63112 4.64176 4.74408 4.84008 4.84592 4.90154 4.95361 4.98056 5.09154 5.10691 5.13037 5.15892 5.17288 5.23404 5.38204 5.42008 5.48337 5.52519 5.59829 5.60442 5.64531 5.78908 5.90317 6.13375 6.56019 6.75859 7.22896 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.080 4.080 3 Si 0.781 3.219 4 C -0.113 4.113 5 C -0.108 4.108 6 C -0.104 4.104 7 C -0.081 4.081 8 C -0.024 4.024 9 C -0.206 4.206 10 C 0.538 3.462 11 O -0.597 6.597 12 N -0.708 5.708 13 C 0.130 3.870 14 C -0.109 4.109 15 H 0.118 0.882 16 C -0.125 4.125 17 C -0.073 4.073 18 H 0.110 0.890 19 C -0.078 4.078 20 C -0.129 4.129 21 C -0.132 4.132 22 C -0.139 4.139 23 C -0.130 4.130 24 C -0.130 4.130 25 C -0.121 4.121 26 C -0.094 4.094 27 C -0.120 4.120 28 H 0.396 0.604 29 H 0.104 0.896 30 H -0.283 1.283 31 H -0.303 1.303 32 H 0.127 0.873 33 H 0.134 0.866 34 H 0.120 0.880 35 H 0.167 0.833 36 H 0.419 0.581 37 H 0.056 0.944 38 H 0.056 0.944 39 H 0.083 0.917 40 H 0.079 0.921 41 H 0.127 0.873 42 H 0.130 0.870 43 H 0.132 0.868 44 H 0.134 0.866 45 H 0.135 0.865 46 H 0.077 0.923 47 H 0.079 0.921 48 H 0.160 0.840 49 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.571 6.823 2.392 7.399 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.189 4.189 3 Si 0.687 3.313 4 C -0.114 4.114 5 C -0.127 4.127 6 C -0.122 4.122 7 C -0.081 4.081 8 C -0.043 4.043 9 C -0.226 4.226 10 C 0.328 3.672 11 O -0.480 6.480 12 N -0.360 5.360 13 C 0.006 3.994 14 C -0.127 4.127 15 H 0.136 0.864 16 C -0.162 4.162 17 C -0.091 4.091 18 H 0.128 0.872 19 C -0.078 4.078 20 C -0.147 4.147 21 C -0.150 4.150 22 C -0.157 4.157 23 C -0.148 4.148 24 C -0.148 4.148 25 C -0.159 4.159 26 C -0.111 4.111 27 C -0.137 4.137 28 H 0.246 0.754 29 H 0.122 0.878 30 H -0.210 1.210 31 H -0.231 1.231 32 H 0.145 0.855 33 H 0.152 0.848 34 H 0.138 0.862 35 H 0.184 0.816 36 H 0.256 0.744 37 H 0.074 0.926 38 H 0.074 0.926 39 H 0.101 0.899 40 H 0.097 0.903 41 H 0.145 0.855 42 H 0.148 0.852 43 H 0.150 0.850 44 H 0.152 0.848 45 H 0.152 0.848 46 H 0.096 0.904 47 H 0.097 0.903 48 H 0.177 0.823 49 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 2.006 6.279 1.577 6.777 hybrid contribution -0.001 -0.821 -0.191 0.843 sum 2.005 5.458 1.386 5.977 Atomic orbital electron populations 1.86481 1.17247 1.82216 1.50519 1.25278 0.85325 1.11188 0.97145 0.93731 0.77827 0.74883 0.84848 1.20618 0.98908 0.94879 0.96969 1.21070 0.99404 0.94302 0.97881 1.21601 0.96594 1.00641 0.93388 1.19124 1.00048 0.94382 0.94545 1.22355 0.91560 0.99507 0.90927 1.23024 1.03367 1.02195 0.94003 1.18806 0.77841 0.86309 0.84236 1.90820 1.59801 1.17678 1.79710 1.45771 1.55156 1.14104 1.20925 1.21343 0.97551 0.95212 0.85264 1.22720 0.98168 0.97483 0.94373 0.86429 1.23164 0.96679 1.01637 0.94709 1.21537 0.98963 0.99202 0.89370 0.87203 1.19950 0.95502 0.96893 0.95465 1.21196 0.97141 0.98805 0.97517 1.21419 1.00480 1.00189 0.92913 1.21433 0.96704 0.98070 0.99508 1.21451 0.97033 0.98327 0.97994 1.21348 1.00544 1.00548 0.92314 1.23002 1.01338 0.97133 0.94452 1.21675 0.98423 0.93094 0.97953 1.21186 0.98291 1.00422 0.93773 0.75435 0.87827 1.20954 1.23146 0.85510 0.84765 0.86234 0.81618 0.74363 0.92589 0.92564 0.89852 0.90260 0.85542 0.85164 0.85032 0.84789 0.84761 0.90444 0.90260 0.82266 0.82996 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.14 12.83 -148.98 -1.91 -1.77 16 2 C -0.08 0.11 2.80 71.24 0.20 0.31 16 3 Si 0.78 -2.95 29.78 68.60 2.04 -0.90 16 4 C -0.11 0.14 5.36 -19.79 -0.11 0.03 16 5 C -0.11 -0.09 9.66 22.22 0.21 0.13 16 6 C -0.10 -0.07 9.80 22.57 0.22 0.15 16 7 C -0.08 0.03 5.87 -20.14 -0.12 -0.08 16 8 C -0.02 -0.02 9.46 23.84 0.23 0.20 16 9 C -0.21 0.35 9.41 23.62 0.22 0.57 16 10 C 0.54 2.18 7.74 86.37 0.67 2.85 16 11 O -0.60 -8.46 16.23 -4.36 -0.07 -8.53 16 12 N -0.71 1.79 5.55 -467.34 -2.59 -0.80 16 13 C 0.13 -0.15 5.51 86.38 0.48 0.33 16 14 C -0.11 0.68 3.75 -10.27 -0.04 0.64 16 15 H 0.12 -1.11 8.14 -2.39 -0.02 -1.13 16 16 C -0.12 0.67 7.01 31.12 0.22 0.88 16 17 C -0.07 0.28 3.98 -11.02 -0.04 0.23 16 18 H 0.11 -0.64 8.09 -2.39 -0.02 -0.66 16 19 C -0.08 -0.06 5.29 -19.86 -0.11 -0.16 16 20 C -0.13 -0.24 8.63 22.27 0.19 -0.04 16 21 C -0.13 -0.31 10.05 22.27 0.22 -0.09 16 22 C -0.14 -0.30 10.05 22.27 0.22 -0.07 16 23 C -0.13 -0.21 10.05 22.27 0.22 0.02 16 24 C -0.13 -0.13 9.71 22.27 0.22 0.08 16 25 C -0.12 0.48 7.11 31.12 0.22 0.70 16 26 C -0.09 0.40 9.41 22.58 0.21 0.62 16 27 C -0.12 0.51 8.65 22.23 0.19 0.71 16 28 H 0.40 -3.36 8.70 -74.05 -0.64 -4.00 16 29 H 0.10 0.03 7.96 -2.39 -0.02 0.01 16 30 H -0.28 -0.15 7.11 99.48 0.71 0.56 16 31 H -0.30 -1.35 7.11 99.48 0.71 -0.64 16 32 H 0.13 0.06 8.06 -2.91 -0.02 0.04 16 33 H 0.13 -0.15 8.06 -2.91 -0.02 -0.17 16 34 H 0.12 0.51 7.52 -2.91 -0.02 0.48 16 35 H 0.17 -1.61 6.07 -2.91 -0.02 -1.63 16 36 H 0.42 -4.01 8.45 -92.71 -0.78 -4.80 16 37 H 0.06 0.11 7.84 -2.39 -0.02 0.10 16 38 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 39 H 0.08 -0.60 8.14 -2.39 -0.02 -0.62 16 40 H 0.08 -0.25 6.06 -2.39 -0.01 -0.26 16 41 H 0.13 -0.02 6.65 -2.91 -0.02 -0.04 16 42 H 0.13 -0.07 8.06 -2.91 -0.02 -0.09 16 43 H 0.13 -0.14 8.06 -2.91 -0.02 -0.16 16 44 H 0.13 -0.26 8.06 -2.91 -0.02 -0.28 16 45 H 0.13 -0.35 8.05 -2.91 -0.02 -0.37 16 46 H 0.08 -0.12 7.69 -2.39 -0.02 -0.14 16 47 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 48 H 0.16 -1.67 6.17 -2.91 -0.02 -1.69 16 49 H 0.15 -1.42 4.88 -2.91 -0.01 -1.44 16 Total: 0.00 -22.04 404.90 0.79 -21.24 By element: Atomic # 1 Polarization: -16.82 SS G_CDS: -0.41 Total: -17.23 kcal Atomic # 6 Polarization: 4.26 SS G_CDS: 3.74 Total: 8.00 kcal Atomic # 7 Polarization: 1.79 SS G_CDS: -2.59 Total: -0.80 kcal Atomic # 8 Polarization: -8.33 SS G_CDS: -1.98 Total: -10.31 kcal Atomic # 14 Polarization: -2.95 SS G_CDS: 2.04 Total: -0.90 kcal Total: -22.04 0.79 -21.24 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12130084_12360594.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.935 kcal (2) G-P(sol) polarization free energy of solvation -22.037 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.898 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.792 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.244 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.691 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds