Wall clock time and date at job start Thu Mar 4 2021 13:25:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.39286 * 121.03230 * 2 1 4 4 C 1.46490 * 134.20494 * 359.94974 * 3 2 1 5 5 C 1.50706 * 126.59687 * 0.02695 * 4 3 2 6 6 O 1.42901 * 109.46834 * 284.99818 * 5 4 3 7 7 Si 1.86302 * 109.47068 * 165.00009 * 5 4 3 8 8 C 1.34179 * 106.80847 * 180.02562 * 4 3 2 9 9 N 1.36950 * 109.94570 * 359.97438 * 8 4 3 10 10 C 1.37154 * 110.11723 * 0.02562 * 9 8 4 11 11 N 1.32813 * 132.96549 * 179.97438 * 10 9 8 12 12 C 1.31318 * 121.89371 * 179.71325 * 11 10 9 13 13 C 1.39749 * 121.03326 * 179.97438 * 2 1 3 14 14 C 1.47673 * 120.44888 * 0.02665 * 13 2 1 15 15 O 1.21571 * 119.99866 * 354.23914 * 14 13 2 16 16 N 1.34773 * 119.99864 * 174.24040 * 14 13 2 17 17 C 1.46496 * 119.99940 * 179.97438 * 16 14 13 18 18 C 1.53004 * 109.47256 * 180.02562 * 17 16 14 19 19 H 1.08997 * 112.84748 * 314.66905 * 18 17 16 20 20 C 1.53785 * 113.61464 * 85.86712 * 18 17 16 21 21 C 1.53953 * 87.02031 * 139.95134 * 20 18 17 22 22 H 1.09001 * 113.60981 * 89.20060 * 21 20 18 23 23 C 1.50690 * 113.66897 * 220.06756 * 21 20 18 24 24 C 1.38236 * 119.99932 * 37.28441 * 23 21 20 25 25 C 1.38244 * 120.00022 * 179.76570 * 24 23 21 26 26 C 1.38229 * 119.99858 * 0.48949 * 25 24 23 27 27 C 1.38233 * 120.00027 * 359.79138 * 26 25 24 28 28 C 1.38236 * 120.00375 * 359.95206 * 27 26 25 29 29 C 1.53779 * 113.61714 * 183.47485 * 18 17 16 30 30 H 1.09000 * 109.47340 * 263.72972 * 1 2 3 31 31 H 1.08999 * 109.47196 * 23.72594 * 1 2 3 32 32 H 1.08998 * 109.47309 * 143.72377 * 1 2 3 33 33 H 1.09000 * 109.47226 * 44.99762 * 5 4 3 34 34 H 0.96705 * 114.00119 * 299.99553 * 6 5 4 35 35 H 1.48505 * 109.99857 * 179.97438 * 7 5 4 36 36 H 1.48506 * 109.99868 * 301.31458 * 7 5 4 37 37 H 1.07993 * 125.03259 * 180.02562 * 8 4 3 38 38 H 0.97001 * 124.94432 * 179.97438 * 9 8 4 39 39 H 1.07990 * 119.31354 * 180.30671 * 12 11 10 40 40 H 0.97000 * 120.00246 * 0.02562 * 16 14 13 41 41 H 1.09000 * 109.47103 * 60.00862 * 17 16 14 42 42 H 1.08997 * 109.47957 * 300.00462 * 17 16 14 43 43 H 1.08997 * 113.61440 * 254.53301 * 20 18 17 44 44 H 1.08999 * 113.60942 * 25.42939 * 20 18 17 45 45 H 1.07999 * 120.00116 * 0.02562 * 24 23 21 46 46 H 1.07999 * 119.99854 * 180.25770 * 25 24 23 47 47 H 1.07996 * 119.99957 * 179.76593 * 26 25 24 48 48 H 1.08004 * 120.00045 * 179.97438 * 27 26 25 49 49 H 1.07996 * 120.00474 * 180.02562 * 28 27 26 50 50 H 1.09001 * 113.61054 * 334.57002 * 29 18 17 51 51 H 1.08999 * 113.61415 * 105.38203 * 29 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8517 2.6101 -0.0009 5 6 0.4528 3.1706 -0.0017 6 8 -0.1186 3.0233 -1.3031 7 14 0.5072 4.9767 0.4519 8 6 2.9949 3.3126 -0.0010 9 7 4.0670 2.4604 0.0004 10 6 3.6348 1.1587 0.0009 11 7 4.2720 -0.0066 0.0017 12 6 3.6266 -1.1503 0.0075 13 6 2.2274 -1.1975 0.0005 14 6 1.5224 -2.4950 0.0005 15 8 0.3117 -2.5290 0.1057 16 7 2.2211 -3.6416 -0.1161 17 6 1.5218 -4.9288 -0.1155 18 6 2.5395 -6.0623 -0.2591 19 1 3.2819 -5.8688 -1.0334 20 6 3.1479 -6.5170 1.0780 21 6 3.0416 -7.9572 0.5446 22 1 3.9219 -8.2837 -0.0091 23 6 2.5997 -8.9559 1.5829 24 6 1.6542 -8.5996 2.5262 25 6 1.2452 -9.5173 3.4758 26 6 1.7893 -10.7879 3.4883 27 6 2.7391 -11.1424 2.5486 28 6 3.1442 -10.2265 1.5958 29 6 1.8989 -7.4570 -0.3547 30 1 -0.3634 -0.1122 1.0215 31 1 -0.3633 0.9408 -0.4135 32 1 -0.3634 -0.8285 -0.6080 33 1 -0.1550 2.6316 0.7251 34 1 0.3714 3.4784 -2.0017 35 1 -0.8663 5.5414 0.4541 36 1 1.1286 5.1458 1.7901 37 1 3.0601 4.3905 -0.0011 38 1 4.9967 2.7370 0.0003 39 1 4.1868 -2.0735 0.0129 40 1 3.1871 -3.6145 -0.1996 41 1 0.8207 -4.9618 -0.9496 42 1 0.9774 -5.0464 0.8214 43 1 4.1737 -6.1804 1.2279 44 1 2.5073 -6.3215 1.9380 45 1 1.2318 -7.6056 2.5188 46 1 0.5034 -9.2402 4.2102 47 1 1.4726 -11.5036 4.2325 48 1 3.1645 -12.1351 2.5586 49 1 3.8859 -10.5035 0.8613 50 1 0.9162 -7.5190 0.1129 51 1 1.9165 -7.8776 -1.3601 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12130084_12890568.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:25:22 Heat of formation + Delta-G solvation = 57.892361 kcal Electronic energy + Delta-G solvation = -33127.166914 eV Core-core repulsion = 28766.200982 eV Total energy + Delta-G solvation = -4360.965932 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.173 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -42.85069 -41.31997 -40.71430 -39.05115 -38.64416 -37.72023 -35.90146 -34.90745 -32.45591 -31.91538 -31.77318 -31.18827 -29.13373 -28.38076 -26.61294 -26.41362 -25.05106 -24.39356 -23.76047 -23.51368 -21.94511 -21.72986 -20.64719 -20.10144 -19.27634 -18.83864 -17.94687 -17.57182 -17.47819 -17.04713 -16.77124 -16.66246 -16.25023 -16.20784 -16.01477 -15.67546 -15.50441 -15.34094 -15.15594 -14.71623 -14.56318 -14.51510 -14.23685 -14.11328 -14.02022 -13.86606 -13.78313 -13.62937 -13.36204 -13.22956 -13.18314 -13.02215 -12.63471 -12.32197 -12.29949 -12.04128 -12.01891 -11.47018 -11.35587 -11.25760 -11.17263 -11.05746 -10.55401 -10.20975 -10.16409 -9.82453 -9.61999 -9.54043 -9.11378 -4.98548 -0.35975 -0.08527 0.43909 0.49448 1.35599 1.43783 1.65942 1.75694 1.79620 2.05821 2.07922 2.75001 2.84445 3.30720 3.47570 3.56122 3.59281 3.61299 3.64318 3.65295 3.74466 3.82126 4.00104 4.06216 4.11808 4.15325 4.18159 4.27511 4.28092 4.29541 4.36102 4.45909 4.49933 4.58603 4.62707 4.63725 4.64797 4.74644 4.76679 4.84957 4.90717 4.95759 4.98697 5.09189 5.12579 5.15626 5.17751 5.23017 5.25741 5.35315 5.43924 5.52199 5.59368 5.63919 5.73562 5.78725 6.12862 6.23565 6.46975 6.82455 6.88866 7.15891 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C 0.058 3.942 3 C -0.167 4.167 4 C -0.208 4.208 5 C -0.050 4.050 6 O -0.558 6.558 7 Si 0.805 3.195 8 C 0.097 3.903 9 N -0.560 5.560 10 C 0.287 3.713 11 N -0.515 5.515 12 C 0.179 3.821 13 C -0.241 4.241 14 C 0.567 3.433 15 O -0.570 6.570 16 N -0.710 5.710 17 C 0.133 3.867 18 C -0.110 4.110 19 H 0.117 0.883 20 C -0.126 4.126 21 C -0.072 4.072 22 H 0.110 0.890 23 C -0.078 4.078 24 C -0.129 4.129 25 C -0.132 4.132 26 C -0.139 4.139 27 C -0.130 4.130 28 C -0.130 4.130 29 C -0.119 4.119 30 H 0.070 0.930 31 H 0.084 0.916 32 H 0.081 0.919 33 H 0.093 0.907 34 H 0.395 0.605 35 H -0.305 1.305 36 H -0.281 1.281 37 H 0.232 0.768 38 H 0.439 0.561 39 H 0.194 0.806 40 H 0.413 0.587 41 H 0.060 0.940 42 H 0.059 0.941 43 H 0.082 0.918 44 H 0.079 0.921 45 H 0.127 0.873 46 H 0.130 0.870 47 H 0.132 0.868 48 H 0.134 0.866 49 H 0.135 0.865 50 H 0.078 0.922 51 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.890 3.423 -2.347 8.044 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.050 3.950 3 C -0.174 4.174 4 C -0.215 4.215 5 C -0.159 4.159 6 O -0.366 6.366 7 Si 0.710 3.290 8 C -0.029 4.029 9 N -0.166 5.166 10 C 0.053 3.947 11 N -0.228 5.228 12 C 0.011 3.989 13 C -0.248 4.248 14 C 0.355 3.645 15 O -0.451 6.451 16 N -0.362 5.362 17 C 0.009 3.991 18 C -0.129 4.129 19 H 0.135 0.865 20 C -0.164 4.164 21 C -0.091 4.091 22 H 0.128 0.872 23 C -0.078 4.078 24 C -0.147 4.147 25 C -0.150 4.150 26 C -0.157 4.157 27 C -0.148 4.148 28 C -0.147 4.147 29 C -0.157 4.157 30 H 0.088 0.912 31 H 0.102 0.898 32 H 0.099 0.901 33 H 0.111 0.889 34 H 0.245 0.755 35 H -0.233 1.233 36 H -0.208 1.208 37 H 0.248 0.752 38 H 0.281 0.719 39 H 0.211 0.789 40 H 0.251 0.749 41 H 0.079 0.921 42 H 0.077 0.923 43 H 0.101 0.899 44 H 0.098 0.902 45 H 0.145 0.855 46 H 0.148 0.852 47 H 0.150 0.850 48 H 0.152 0.848 49 H 0.152 0.848 50 H 0.097 0.903 51 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 6.406 3.792 -1.398 7.574 hybrid contribution -0.490 -0.994 0.457 1.199 sum 5.916 2.798 -0.941 6.612 Atomic orbital electron populations 1.21079 0.89696 1.04171 1.02782 1.20062 0.96934 0.90363 0.87675 1.19786 0.93368 0.94467 1.09766 1.20808 0.96387 0.90281 1.14007 1.24741 0.89911 1.12542 0.88687 1.86475 1.54574 1.78590 1.16961 0.94064 0.80604 0.72476 0.81883 1.22407 0.83612 0.97377 0.99531 1.41623 1.10726 1.01616 1.62673 1.18785 0.89453 0.86964 0.99471 1.66514 1.40805 0.96474 1.18994 1.22954 0.89578 0.95360 0.91022 1.20526 0.95542 0.93343 1.15425 1.18033 0.86439 0.84125 0.75889 1.90742 1.15214 1.87625 1.51475 1.45753 1.11405 1.05038 1.74039 1.21375 0.94977 0.81118 1.01581 1.22734 0.98001 0.92809 0.99348 0.86464 1.23207 1.02210 0.94286 0.96660 1.21563 0.99436 0.92939 0.95118 0.87218 1.19949 0.96413 0.94943 0.96466 1.21201 0.98000 0.99956 0.95500 1.21417 1.00314 0.94078 0.99230 1.21425 0.97645 0.97015 0.99627 1.21448 0.97664 1.00329 0.95360 1.21348 1.00621 0.93419 0.99351 1.22982 0.97785 0.94488 1.00450 0.91175 0.89757 0.90077 0.88917 0.75523 1.23345 1.20783 0.75163 0.71920 0.78901 0.74876 0.92118 0.92286 0.89914 0.90230 0.85535 0.85208 0.85047 0.84785 0.84761 0.90343 0.90176 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.24 8.46 71.23 0.60 -0.64 16 2 C 0.06 0.53 5.98 -19.25 -0.12 0.42 16 3 C -0.17 -1.05 6.16 -20.19 -0.12 -1.18 16 4 C -0.21 -0.03 5.57 -18.64 -0.10 -0.13 16 5 C -0.05 0.02 1.88 71.24 0.13 0.15 16 6 O -0.56 -0.31 11.67 -148.98 -1.74 -2.05 16 7 Si 0.81 -4.16 30.77 68.60 2.11 -2.05 16 8 C 0.10 -0.64 10.44 82.97 0.87 0.23 16 9 N -0.56 2.06 6.04 -192.26 -1.16 0.90 16 10 C 0.29 1.26 8.42 134.03 1.13 2.38 16 11 N -0.51 -2.60 10.37 -191.76 -1.99 -4.59 16 12 C 0.18 0.43 10.67 85.20 0.91 1.34 16 13 C -0.24 -1.59 5.89 -19.99 -0.12 -1.71 16 14 C 0.57 4.19 7.72 86.74 0.67 4.85 16 15 O -0.57 -8.42 13.49 -3.94 -0.05 -8.47 16 16 N -0.71 0.21 5.51 -466.15 -2.57 -2.35 16 17 C 0.13 -0.06 5.50 86.38 0.48 0.42 16 18 C -0.11 0.59 3.75 -10.27 -0.04 0.55 16 19 H 0.12 -0.98 8.14 -2.39 -0.02 -1.00 16 20 C -0.13 0.55 7.02 31.18 0.22 0.77 16 21 C -0.07 0.22 3.98 -10.96 -0.04 0.18 16 22 H 0.11 -0.56 8.09 -2.39 -0.02 -0.58 16 23 C -0.08 -0.11 5.29 -19.87 -0.11 -0.21 16 24 C -0.13 -0.33 8.63 22.27 0.19 -0.13 16 25 C -0.13 -0.41 10.05 22.27 0.22 -0.18 16 26 C -0.14 -0.39 10.05 22.27 0.22 -0.16 16 27 C -0.13 -0.29 10.05 22.27 0.22 -0.06 16 28 C -0.13 -0.22 9.71 22.27 0.22 0.00 16 29 C -0.12 0.41 7.11 31.12 0.22 0.63 16 30 H 0.07 0.76 8.14 -2.39 -0.02 0.74 16 31 H 0.08 0.79 4.79 -2.39 -0.01 0.77 16 32 H 0.08 1.10 5.95 -2.39 -0.01 1.09 16 33 H 0.09 0.32 7.13 -2.39 -0.02 0.30 16 34 H 0.39 -3.30 8.70 -74.05 -0.64 -3.94 16 35 H -0.31 -1.12 7.11 99.48 0.71 -0.41 16 36 H -0.28 0.21 7.11 99.48 0.71 0.92 16 37 H 0.23 -3.86 6.35 -2.91 -0.02 -3.88 16 38 H 0.44 -4.14 8.96 -92.71 -0.83 -4.97 16 39 H 0.19 -1.15 6.43 -2.92 -0.02 -1.17 16 40 H 0.41 -2.72 6.55 -92.71 -0.61 -3.33 16 41 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 42 H 0.06 0.14 7.87 -2.39 -0.02 0.12 16 43 H 0.08 -0.50 8.14 -2.39 -0.02 -0.52 16 44 H 0.08 -0.18 6.08 -2.39 -0.01 -0.19 16 45 H 0.13 0.07 6.65 -2.91 -0.02 0.05 16 46 H 0.13 0.03 8.06 -2.91 -0.02 0.01 16 47 H 0.13 -0.06 8.06 -2.91 -0.02 -0.08 16 48 H 0.13 -0.18 8.06 -2.91 -0.02 -0.20 16 49 H 0.13 -0.26 8.05 -2.91 -0.02 -0.29 16 50 H 0.08 -0.10 7.69 -2.39 -0.02 -0.12 16 51 H 0.08 -0.34 8.14 -2.39 -0.02 -0.36 16 Total: 0.00 -27.26 408.54 -0.77 -28.03 By element: Atomic # 1 Polarization: -15.89 SS G_CDS: -1.03 Total: -16.92 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: 5.66 Total: 7.51 kcal Atomic # 7 Polarization: -0.33 SS G_CDS: -5.72 Total: -6.05 kcal Atomic # 8 Polarization: -8.73 SS G_CDS: -1.79 Total: -10.52 kcal Atomic # 14 Polarization: -4.16 SS G_CDS: 2.11 Total: -2.05 kcal Total: -27.26 -0.77 -28.03 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12130084_12890568.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 85.922 kcal (2) G-P(sol) polarization free energy of solvation -27.259 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.663 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.770 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.029 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.892 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds