Wall clock time and date at job start Thu Mar 4 2021 13:26:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.36411 * 125.80178 * 2 1 4 4 C 1.47382 * 127.19408 * 359.96723 * 3 2 1 5 5 O 1.21612 * 119.99664 * 359.97438 * 4 3 2 6 6 N 1.34779 * 120.00123 * 179.97438 * 4 3 2 7 7 C 1.46499 * 119.99872 * 180.02562 * 6 4 3 8 8 C 1.53000 * 109.46840 * 180.02562 * 7 6 4 9 9 H 1.09000 * 112.85142 * 314.66202 * 8 7 6 10 10 C 1.53778 * 113.61854 * 85.86223 * 8 7 6 11 11 C 1.53950 * 87.02008 * 139.94859 * 10 8 7 12 12 H 1.08998 * 113.53938 * 89.19387 * 11 10 8 13 13 C 1.50700 * 113.74180 * 220.05467 * 11 10 8 14 14 C 1.38242 * 120.00009 * 37.33036 * 13 11 10 15 15 C 1.38235 * 119.99518 * 179.76689 * 14 13 11 16 16 C 1.38235 * 120.00446 * 0.47806 * 15 14 13 17 17 C 1.38233 * 119.99857 * 359.79652 * 16 15 14 18 18 C 1.38237 * 120.00039 * 217.59557 * 13 11 10 19 19 C 1.53777 * 87.11423 * 334.63767 * 11 10 8 20 20 C 1.47027 * 105.61836 * 180.22594 * 3 2 1 21 21 C 1.34184 * 105.94861 * 359.63140 * 20 3 2 22 22 C 1.50703 * 125.43488 * 180.12315 * 21 20 3 23 23 O 1.42904 * 109.47054 * 65.32056 * 22 21 20 24 24 Si 1.86300 * 109.47020 * 185.31521 * 22 21 20 25 25 O 1.33649 * 125.80115 * 180.02562 * 2 1 3 26 26 H 1.09005 * 109.47448 * 89.99980 * 1 2 3 27 27 H 1.08999 * 109.47061 * 210.00086 * 1 2 3 28 28 H 1.09003 * 109.47307 * 329.99925 * 1 2 3 29 29 H 0.97000 * 119.99708 * 359.97438 * 6 4 3 30 30 H 1.09002 * 109.47391 * 59.99686 * 7 6 4 31 31 H 1.09001 * 109.46813 * 299.99742 * 7 6 4 32 32 H 1.09003 * 113.61363 * 254.53223 * 10 8 7 33 33 H 1.09005 * 113.61131 * 25.42909 * 10 8 7 34 34 H 1.07999 * 119.99641 * 359.97438 * 14 13 11 35 35 H 1.08001 * 119.99367 * 180.25555 * 15 14 13 36 36 H 1.08000 * 119.99931 * 179.76943 * 16 15 14 37 37 H 1.07999 * 120.00116 * 179.97438 * 17 16 15 38 38 H 1.07995 * 120.00239 * 0.02562 * 18 13 11 39 39 H 1.09001 * 113.61353 * 270.81253 * 19 11 10 40 40 H 1.09000 * 113.61641 * 139.91154 * 19 11 10 41 41 H 1.07998 * 127.02869 * 179.74252 * 20 3 2 42 42 H 1.08996 * 109.47187 * 305.31835 * 22 21 20 43 43 H 0.96699 * 114.00081 * 59.99138 * 23 22 21 44 44 H 1.48495 * 110.00103 * 180.02562 * 24 22 21 45 45 H 1.48500 * 110.00263 * 301.32132 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3049 1.1064 0.0000 4 6 1.8739 2.5157 -0.0007 5 8 0.6889 2.7892 -0.0018 6 7 2.7930 3.5015 -0.0001 7 6 2.3645 4.9025 -0.0002 8 6 3.5948 5.8120 0.0000 9 1 4.3549 5.4959 0.7145 10 6 4.1509 6.0965 -1.4052 11 6 4.3822 7.5435 -0.9332 12 1 5.3584 7.7011 -0.4749 13 6 4.0500 8.5816 -1.9739 14 6 2.9668 8.3973 -2.8129 15 6 2.6593 9.3519 -3.7643 16 6 3.4407 10.4860 -3.8833 17 6 4.5272 10.6675 -3.0482 18 6 4.8317 9.7154 -2.0933 19 6 3.2540 7.3092 0.0852 20 6 3.6849 0.5991 -0.0056 21 6 3.5859 -0.7391 -0.0001 22 6 4.7459 -1.7011 -0.0001 23 8 5.4757 -1.5674 1.2213 24 14 4.1069 -3.4443 -0.1539 25 8 2.2888 -1.0840 -0.0005 26 1 -0.3634 0.0000 -1.0277 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3634 0.8900 0.5138 29 1 3.7382 3.2834 0.0012 30 1 1.7664 5.0996 0.8895 31 1 1.7675 5.0997 -0.8905 32 1 5.0712 5.5565 -1.6282 33 1 3.4055 6.0089 -2.1957 34 1 2.3589 7.5092 -2.7227 35 1 1.8106 9.2099 -4.4169 36 1 3.2026 11.2299 -4.6291 37 1 5.1380 11.5533 -3.1415 38 1 5.6806 9.8572 -1.4410 39 1 2.2630 7.5538 -0.2970 40 1 3.4513 7.7469 1.0637 41 1 4.5928 1.1839 -0.0110 42 1 5.4020 -1.4790 -0.8416 43 1 4.9529 -1.7506 2.0139 44 1 5.2412 -4.4028 -0.1546 45 1 3.1859 -3.7488 0.9704 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12130084_13308374.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:26:10 Heat of formation + Delta-G solvation = -6.954892 kcal Electronic energy + Delta-G solvation = -26666.162099 eV Core-core repulsion = 22810.307469 eV Total energy + Delta-G solvation = -3855.854631 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.151 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -43.72971 -41.28964 -40.23514 -38.92695 -38.20145 -35.56797 -34.10123 -33.14387 -32.22192 -31.76093 -29.71557 -28.67100 -26.75864 -25.86552 -24.87998 -23.81289 -23.53011 -22.13824 -21.84625 -20.75323 -20.07946 -18.99916 -18.04308 -17.81187 -17.67294 -17.06059 -16.69127 -16.57795 -16.21893 -16.04842 -15.86924 -15.78808 -15.35139 -14.87263 -14.61392 -14.38509 -14.22862 -14.21020 -14.06602 -13.97527 -13.88406 -13.80092 -13.48906 -13.10871 -12.97779 -12.83899 -12.72101 -12.37794 -12.10176 -12.07160 -11.58601 -11.47128 -11.30790 -11.00035 -10.86041 -10.70535 -10.05661 -9.79867 -9.55547 -9.54066 -5.02215 0.32215 0.45144 0.52153 0.84398 1.09247 1.42373 1.68287 1.88857 2.20930 2.39824 2.85445 3.08047 3.33953 3.44754 3.48469 3.57122 3.76950 3.80058 3.89929 3.99186 4.06784 4.13666 4.14453 4.18771 4.25481 4.26568 4.40307 4.42341 4.55939 4.58470 4.61834 4.65154 4.69167 4.74597 4.75844 4.80862 4.88219 4.95905 5.06498 5.11917 5.12248 5.18149 5.22303 5.35352 5.48006 5.59936 5.65927 5.75652 5.91081 6.12232 6.18156 6.52671 7.27085 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.095 3.905 3 C -0.253 4.253 4 C 0.591 3.409 5 O -0.540 6.540 6 N -0.723 5.723 7 C 0.131 3.869 8 C -0.126 4.126 9 H 0.098 0.902 10 C -0.128 4.128 11 C -0.073 4.073 12 H 0.098 0.902 13 C -0.072 4.072 14 C -0.117 4.117 15 C -0.118 4.118 16 C -0.125 4.125 17 C -0.118 4.118 18 C -0.117 4.117 19 C -0.118 4.118 20 C -0.147 4.147 21 C -0.055 4.055 22 C -0.034 4.034 23 O -0.521 6.521 24 Si 0.701 3.299 25 O -0.168 6.168 26 H 0.093 0.907 27 H 0.081 0.919 28 H 0.110 0.890 29 H 0.401 0.599 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.071 0.929 33 H 0.088 0.912 34 H 0.121 0.879 35 H 0.122 0.878 36 H 0.121 0.879 37 H 0.121 0.879 38 H 0.120 0.880 39 H 0.088 0.912 40 H 0.074 0.926 41 H 0.158 0.842 42 H 0.138 0.862 43 H 0.381 0.619 44 H -0.249 1.249 45 H -0.256 1.256 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.483 -0.237 -1.324 2.003 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.042 3.958 3 C -0.257 4.257 4 C 0.380 3.620 5 O -0.419 6.419 6 N -0.374 5.374 7 C 0.008 3.992 8 C -0.145 4.145 9 H 0.116 0.884 10 C -0.165 4.165 11 C -0.092 4.092 12 H 0.117 0.883 13 C -0.072 4.072 14 C -0.135 4.135 15 C -0.136 4.136 16 C -0.143 4.143 17 C -0.136 4.136 18 C -0.135 4.135 19 C -0.156 4.156 20 C -0.167 4.167 21 C -0.103 4.103 22 C -0.143 4.143 23 O -0.328 6.328 24 Si 0.600 3.400 25 O -0.066 6.066 26 H 0.112 0.888 27 H 0.099 0.901 28 H 0.129 0.871 29 H 0.235 0.765 30 H 0.089 0.911 31 H 0.089 0.911 32 H 0.090 0.910 33 H 0.107 0.893 34 H 0.139 0.861 35 H 0.140 0.860 36 H 0.139 0.861 37 H 0.140 0.860 38 H 0.138 0.862 39 H 0.107 0.893 40 H 0.093 0.907 41 H 0.175 0.825 42 H 0.155 0.845 43 H 0.229 0.771 44 H -0.173 1.173 45 H -0.180 1.180 Dipole moment (debyes) X Y Z Total from point charges 0.982 -0.964 -1.354 1.930 hybrid contribution 0.812 0.676 1.066 1.501 sum 1.793 -0.288 -0.288 1.839 Atomic orbital electron populations 1.20702 0.83336 1.05373 1.04847 1.22918 0.94075 0.82849 0.95982 1.21133 0.93213 0.93844 1.17552 1.17167 0.85399 0.83719 0.75756 1.90780 1.16540 1.84054 1.50571 1.45758 1.09773 1.06051 1.75806 1.21389 0.96200 0.78983 1.02641 1.22804 0.97601 0.95394 0.98666 0.88366 1.23227 1.01723 0.95246 0.96351 1.21511 0.99569 0.93066 0.95010 0.88339 1.19703 0.95487 0.95364 0.96608 1.21019 0.97322 0.99321 0.95843 1.21181 0.99663 0.94280 0.98453 1.21196 0.95634 0.97896 0.99532 1.21185 0.97504 0.99161 0.95779 1.21078 0.99677 0.94048 0.98714 1.22997 0.99019 0.94052 0.99548 1.22584 0.96461 0.93488 1.04153 1.22546 0.82912 0.95565 1.09310 1.24354 0.91293 1.07993 0.90701 1.86660 1.39364 1.91544 1.15237 0.94380 0.81373 0.73567 0.90656 1.83680 1.16383 1.35071 1.71423 0.88819 0.90066 0.87123 0.76459 0.91113 0.91103 0.90990 0.89335 0.86079 0.86031 0.86096 0.86049 0.86152 0.89333 0.90696 0.82475 0.84494 0.77077 1.17286 1.17981 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.00 9.89 36.00 0.36 0.36 16 2 C 0.10 0.16 7.37 -34.97 -0.26 -0.10 16 3 C -0.25 -0.50 6.31 -103.27 -0.65 -1.15 16 4 C 0.59 1.70 7.81 -12.54 -0.10 1.60 16 5 O -0.54 -3.09 14.85 5.27 0.08 -3.01 16 6 N -0.72 -0.06 5.55 -61.40 -0.34 -0.40 16 7 C 0.13 -0.05 5.50 -4.04 -0.02 -0.07 16 8 C -0.13 0.28 3.75 -89.81 -0.34 -0.06 16 9 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 10 C -0.13 0.23 7.02 -25.83 -0.18 0.05 16 11 C -0.07 0.09 3.97 -90.87 -0.36 -0.27 16 12 H 0.10 -0.17 8.09 -51.93 -0.42 -0.59 16 13 C -0.07 -0.04 5.29 -104.62 -0.55 -0.59 16 14 C -0.12 -0.08 8.63 -39.58 -0.34 -0.42 16 15 C -0.12 -0.10 10.05 -39.58 -0.40 -0.50 16 16 C -0.12 -0.11 10.05 -39.58 -0.40 -0.51 16 17 C -0.12 -0.10 10.05 -39.58 -0.40 -0.50 16 18 C -0.12 -0.09 9.71 -39.58 -0.38 -0.47 16 19 C -0.12 0.19 7.11 -25.92 -0.18 0.01 16 20 C -0.15 -0.05 10.48 -37.45 -0.39 -0.44 16 21 C -0.06 -0.02 6.18 -35.74 -0.22 -0.24 16 22 C -0.03 0.04 2.97 36.01 0.11 0.15 16 23 O -0.52 0.04 12.88 -35.23 -0.45 -0.42 16 24 Si 0.70 -0.88 32.09 -169.99 -5.46 -6.33 16 25 O -0.17 -0.21 8.90 7.66 0.07 -0.14 16 26 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 27 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 28 H 0.11 0.14 6.49 -51.93 -0.34 -0.19 16 29 H 0.40 -0.80 7.64 -40.82 -0.31 -1.12 16 30 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 31 H 0.07 0.03 7.87 -51.93 -0.41 -0.38 16 32 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 33 H 0.09 -0.11 6.09 -51.93 -0.32 -0.43 16 34 H 0.12 -0.06 6.66 -52.49 -0.35 -0.41 16 35 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 36 H 0.12 -0.08 8.06 -52.49 -0.42 -0.51 16 37 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 38 H 0.12 -0.09 8.05 -52.49 -0.42 -0.51 16 39 H 0.09 -0.10 7.69 -51.93 -0.40 -0.50 16 40 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 41 H 0.16 -0.27 7.74 -52.49 -0.41 -0.67 16 42 H 0.14 -0.38 7.96 -51.93 -0.41 -0.79 16 43 H 0.38 -1.00 8.70 45.56 0.40 -0.60 16 44 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 45 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 LS Contribution 376.65 15.07 5.68 5.68 Total: 0.00 -7.14 376.65 -11.54 -18.68 By element: Atomic # 1 Polarization: -4.50 SS G_CDS: -6.39 Total: -10.89 kcal Atomic # 6 Polarization: 1.56 SS G_CDS: -4.72 Total: -3.16 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: -0.34 Total: -0.40 kcal Atomic # 8 Polarization: -3.26 SS G_CDS: -0.31 Total: -3.57 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.46 Total: -6.33 kcal Total LS contribution 5.68 Total: 5.68 kcal Total: -7.14 -11.54 -18.68 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12130084_13308374.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.724 kcal (2) G-P(sol) polarization free energy of solvation -7.143 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.581 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.536 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.679 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.955 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds