Wall clock time and date at job start Thu Mar 4 2021 13:26:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.36411 * 125.80178 * 2 1 4 4 C 1.47382 * 127.19408 * 359.96723 * 3 2 1 5 5 O 1.21612 * 119.99664 * 359.97438 * 4 3 2 6 6 N 1.34779 * 120.00123 * 179.97438 * 4 3 2 7 7 C 1.46499 * 119.99872 * 180.02562 * 6 4 3 8 8 C 1.53000 * 109.46840 * 180.02562 * 7 6 4 9 9 H 1.09000 * 112.85142 * 314.66202 * 8 7 6 10 10 C 1.53778 * 113.61854 * 85.86223 * 8 7 6 11 11 C 1.53950 * 87.02008 * 139.94859 * 10 8 7 12 12 H 1.08998 * 113.53938 * 89.19387 * 11 10 8 13 13 C 1.50700 * 113.74180 * 220.05467 * 11 10 8 14 14 C 1.38242 * 120.00009 * 37.33036 * 13 11 10 15 15 C 1.38235 * 119.99518 * 179.76689 * 14 13 11 16 16 C 1.38235 * 120.00446 * 0.47806 * 15 14 13 17 17 C 1.38233 * 119.99857 * 359.79652 * 16 15 14 18 18 C 1.38237 * 120.00039 * 217.59557 * 13 11 10 19 19 C 1.53777 * 87.11423 * 334.63767 * 11 10 8 20 20 C 1.47027 * 105.61836 * 180.22594 * 3 2 1 21 21 C 1.34184 * 105.94861 * 359.63140 * 20 3 2 22 22 C 1.50703 * 125.43488 * 180.12315 * 21 20 3 23 23 O 1.42904 * 109.47054 * 65.32056 * 22 21 20 24 24 Si 1.86300 * 109.47020 * 185.31521 * 22 21 20 25 25 O 1.33649 * 125.80115 * 180.02562 * 2 1 3 26 26 H 1.09005 * 109.47448 * 89.99980 * 1 2 3 27 27 H 1.08999 * 109.47061 * 210.00086 * 1 2 3 28 28 H 1.09003 * 109.47307 * 329.99925 * 1 2 3 29 29 H 0.97000 * 119.99708 * 359.97438 * 6 4 3 30 30 H 1.09002 * 109.47391 * 59.99686 * 7 6 4 31 31 H 1.09001 * 109.46813 * 299.99742 * 7 6 4 32 32 H 1.09003 * 113.61363 * 254.53223 * 10 8 7 33 33 H 1.09005 * 113.61131 * 25.42909 * 10 8 7 34 34 H 1.07999 * 119.99641 * 359.97438 * 14 13 11 35 35 H 1.08001 * 119.99367 * 180.25555 * 15 14 13 36 36 H 1.08000 * 119.99931 * 179.76943 * 16 15 14 37 37 H 1.07999 * 120.00116 * 179.97438 * 17 16 15 38 38 H 1.07995 * 120.00239 * 0.02562 * 18 13 11 39 39 H 1.09001 * 113.61353 * 270.81253 * 19 11 10 40 40 H 1.09000 * 113.61641 * 139.91154 * 19 11 10 41 41 H 1.07998 * 127.02869 * 179.74252 * 20 3 2 42 42 H 1.08996 * 109.47187 * 305.31835 * 22 21 20 43 43 H 0.96699 * 114.00081 * 59.99138 * 23 22 21 44 44 H 1.48495 * 110.00103 * 180.02562 * 24 22 21 45 45 H 1.48500 * 110.00263 * 301.32132 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3049 1.1064 0.0000 4 6 1.8739 2.5157 -0.0007 5 8 0.6889 2.7892 -0.0018 6 7 2.7930 3.5015 -0.0001 7 6 2.3645 4.9025 -0.0002 8 6 3.5948 5.8120 0.0000 9 1 4.3549 5.4959 0.7145 10 6 4.1509 6.0965 -1.4052 11 6 4.3822 7.5435 -0.9332 12 1 5.3584 7.7011 -0.4749 13 6 4.0500 8.5816 -1.9739 14 6 2.9668 8.3973 -2.8129 15 6 2.6593 9.3519 -3.7643 16 6 3.4407 10.4860 -3.8833 17 6 4.5272 10.6675 -3.0482 18 6 4.8317 9.7154 -2.0933 19 6 3.2540 7.3092 0.0852 20 6 3.6849 0.5991 -0.0056 21 6 3.5859 -0.7391 -0.0001 22 6 4.7459 -1.7011 -0.0001 23 8 5.4757 -1.5674 1.2213 24 14 4.1069 -3.4443 -0.1539 25 8 2.2888 -1.0840 -0.0005 26 1 -0.3634 0.0000 -1.0277 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3634 0.8900 0.5138 29 1 3.7382 3.2834 0.0012 30 1 1.7664 5.0996 0.8895 31 1 1.7675 5.0997 -0.8905 32 1 5.0712 5.5565 -1.6282 33 1 3.4055 6.0089 -2.1957 34 1 2.3589 7.5092 -2.7227 35 1 1.8106 9.2099 -4.4169 36 1 3.2026 11.2299 -4.6291 37 1 5.1380 11.5533 -3.1415 38 1 5.6806 9.8572 -1.4410 39 1 2.2630 7.5538 -0.2970 40 1 3.4513 7.7469 1.0637 41 1 4.5928 1.1839 -0.0110 42 1 5.4020 -1.4790 -0.8416 43 1 4.9529 -1.7506 2.0139 44 1 5.2412 -4.4028 -0.1546 45 1 3.1859 -3.7488 0.9704 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12130084_13308374.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:26:09 Heat of formation + Delta-G solvation = -1.669588 kcal Electronic energy + Delta-G solvation = -26665.932911 eV Core-core repulsion = 22810.307469 eV Total energy + Delta-G solvation = -3855.625443 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.151 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -43.77230 -41.24808 -40.37115 -38.90833 -38.14891 -35.68030 -34.16423 -33.14789 -32.21354 -31.76077 -29.71365 -28.66286 -26.63119 -25.86120 -24.86594 -23.85322 -23.52999 -22.15007 -21.87399 -20.78797 -20.01037 -18.99039 -18.04304 -17.82516 -17.71147 -17.05715 -16.74005 -16.57731 -16.25997 -16.01538 -15.83376 -15.79834 -15.38021 -14.89490 -14.64959 -14.40230 -14.23161 -14.22148 -14.12058 -13.97392 -13.88087 -13.80026 -13.38052 -13.05833 -12.94023 -12.83671 -12.67365 -12.33152 -12.17976 -12.02710 -11.49225 -11.42947 -11.27228 -11.03254 -10.94943 -10.72505 -10.15148 -9.82208 -9.58955 -9.54195 -4.94261 0.22413 0.43921 0.49742 0.82649 1.17057 1.42217 1.70473 1.91420 2.16200 2.24559 2.84532 3.17551 3.38515 3.52955 3.59162 3.65061 3.76084 3.79960 3.99240 4.05189 4.11179 4.12189 4.18240 4.26964 4.30982 4.38663 4.46752 4.48333 4.59244 4.61729 4.63207 4.65634 4.72535 4.79143 4.83575 4.88979 4.94240 5.07473 5.11355 5.13865 5.15395 5.21290 5.22467 5.39241 5.50118 5.59430 5.64209 5.77957 5.88585 6.13000 6.33354 6.48131 7.15199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.085 3.915 3 C -0.269 4.269 4 C 0.586 3.414 5 O -0.577 6.577 6 N -0.709 5.709 7 C 0.133 3.867 8 C -0.111 4.111 9 H 0.113 0.887 10 C -0.125 4.125 11 C -0.072 4.072 12 H 0.108 0.892 13 C -0.079 4.079 14 C -0.128 4.128 15 C -0.131 4.131 16 C -0.139 4.139 17 C -0.130 4.130 18 C -0.130 4.130 19 C -0.118 4.118 20 C -0.145 4.145 21 C -0.059 4.059 22 C -0.031 4.031 23 O -0.534 6.534 24 Si 0.768 3.232 25 O -0.173 6.173 26 H 0.102 0.898 27 H 0.096 0.904 28 H 0.095 0.905 29 H 0.413 0.587 30 H 0.060 0.940 31 H 0.061 0.939 32 H 0.080 0.920 33 H 0.081 0.919 34 H 0.128 0.872 35 H 0.131 0.869 36 H 0.132 0.868 37 H 0.134 0.866 38 H 0.133 0.867 39 H 0.080 0.920 40 H 0.079 0.921 41 H 0.179 0.821 42 H 0.159 0.841 43 H 0.390 0.610 44 H -0.282 1.282 45 H -0.295 1.295 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.741 -0.261 -1.386 3.083 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.031 3.969 3 C -0.273 4.273 4 C 0.375 3.625 5 O -0.459 6.459 6 N -0.361 5.361 7 C 0.010 3.990 8 C -0.130 4.130 9 H 0.131 0.869 10 C -0.162 4.162 11 C -0.090 4.090 12 H 0.126 0.874 13 C -0.079 4.079 14 C -0.146 4.146 15 C -0.149 4.149 16 C -0.157 4.157 17 C -0.148 4.148 18 C -0.148 4.148 19 C -0.156 4.156 20 C -0.164 4.164 21 C -0.107 4.107 22 C -0.141 4.141 23 O -0.342 6.342 24 Si 0.673 3.327 25 O -0.070 6.070 26 H 0.120 0.880 27 H 0.115 0.885 28 H 0.114 0.886 29 H 0.250 0.750 30 H 0.078 0.922 31 H 0.079 0.921 32 H 0.098 0.902 33 H 0.099 0.901 34 H 0.146 0.854 35 H 0.149 0.851 36 H 0.150 0.850 37 H 0.152 0.848 38 H 0.151 0.849 39 H 0.099 0.901 40 H 0.098 0.902 41 H 0.196 0.804 42 H 0.176 0.824 43 H 0.240 0.760 44 H -0.209 1.209 45 H -0.222 1.222 Dipole moment (debyes) X Y Z Total from point charges 2.270 -0.971 -1.425 2.851 hybrid contribution 0.417 0.664 1.119 1.366 sum 2.687 -0.307 -0.306 2.722 Atomic orbital electron populations 1.20702 0.82677 1.05333 1.05370 1.23214 0.94761 0.83031 0.95894 1.21223 0.94313 0.93453 1.18338 1.17398 0.85214 0.84512 0.75413 1.90757 1.18038 1.84630 1.52494 1.45688 1.10095 1.05789 1.74490 1.21376 0.96953 0.79045 1.01663 1.22718 0.96893 0.94494 0.98868 0.86914 1.23196 1.01864 0.94974 0.96216 1.21548 1.00013 0.92798 0.94649 0.87392 1.19940 0.95291 0.95769 0.96855 1.21202 0.97707 0.99655 0.96041 1.21424 1.00172 0.94496 0.98851 1.21435 0.95866 0.98312 1.00054 1.21446 0.97739 0.99780 0.95841 1.21340 1.00249 0.94164 0.99033 1.22985 0.98593 0.94399 0.99653 1.22810 0.96370 0.93615 1.03639 1.22843 0.82796 0.95974 1.09042 1.24503 0.91167 1.07302 0.91110 1.86639 1.40075 1.91539 1.15972 0.93539 0.78196 0.72143 0.88854 1.83681 1.16881 1.35020 1.71462 0.88001 0.88519 0.88642 0.75040 0.92167 0.92111 0.90167 0.90060 0.85450 0.85062 0.84989 0.84808 0.84863 0.90131 0.90235 0.80398 0.82370 0.76011 1.20894 1.22218 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.06 9.89 71.23 0.70 0.64 16 2 C 0.08 0.32 7.37 25.26 0.19 0.50 16 3 C -0.27 -1.10 6.31 -18.99 -0.12 -1.22 16 4 C 0.59 3.76 7.81 86.65 0.68 4.43 16 5 O -0.58 -7.51 14.85 -4.07 -0.06 -7.57 16 6 N -0.71 -0.05 5.55 -466.41 -2.59 -2.64 16 7 C 0.13 -0.06 5.50 86.38 0.48 0.42 16 8 C -0.11 0.56 3.75 -10.27 -0.04 0.53 16 9 H 0.11 -0.84 8.14 -2.39 -0.02 -0.86 16 10 C -0.13 0.54 7.02 31.18 0.22 0.76 16 11 C -0.07 0.22 3.97 -10.96 -0.04 0.18 16 12 H 0.11 -0.52 8.09 -2.39 -0.02 -0.54 16 13 C -0.08 -0.09 5.29 -19.86 -0.11 -0.19 16 14 C -0.13 -0.25 8.63 22.27 0.19 -0.06 16 15 C -0.13 -0.31 10.05 22.27 0.22 -0.09 16 16 C -0.14 -0.31 10.05 22.27 0.22 -0.09 16 17 C -0.13 -0.24 10.05 22.27 0.22 -0.02 16 18 C -0.13 -0.19 9.71 22.27 0.22 0.03 16 19 C -0.12 0.42 7.11 31.12 0.22 0.64 16 20 C -0.15 0.05 10.48 23.65 0.25 0.29 16 21 C -0.06 0.01 6.18 24.76 0.15 0.17 16 22 C -0.03 0.11 2.97 71.24 0.21 0.32 16 23 O -0.53 0.64 12.88 -148.98 -1.92 -1.28 16 24 Si 0.77 -1.97 32.09 68.60 2.20 0.23 16 25 O -0.17 -0.41 8.90 4.49 0.04 -0.37 16 26 H 0.10 -0.13 8.14 -2.38 -0.02 -0.15 16 27 H 0.10 -0.28 8.14 -2.39 -0.02 -0.30 16 28 H 0.10 0.40 6.49 -2.39 -0.02 0.39 16 29 H 0.41 -2.09 7.64 -92.71 -0.71 -2.79 16 30 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 31 H 0.06 0.12 7.87 -2.39 -0.02 0.10 16 32 H 0.08 -0.45 8.14 -2.39 -0.02 -0.46 16 33 H 0.08 -0.20 6.09 -2.38 -0.01 -0.22 16 34 H 0.13 -0.03 6.66 -2.91 -0.02 -0.05 16 35 H 0.13 -0.09 8.06 -2.91 -0.02 -0.11 16 36 H 0.13 -0.14 8.06 -2.91 -0.02 -0.16 16 37 H 0.13 -0.22 8.06 -2.91 -0.02 -0.24 16 38 H 0.13 -0.27 8.05 -2.91 -0.02 -0.29 16 39 H 0.08 -0.14 7.69 -2.39 -0.02 -0.16 16 40 H 0.08 -0.33 8.14 -2.39 -0.02 -0.35 16 41 H 0.18 -0.96 7.74 -2.91 -0.02 -0.98 16 42 H 0.16 -1.21 7.96 -2.39 -0.02 -1.23 16 43 H 0.39 -2.26 8.70 -74.06 -0.64 -2.91 16 44 H -0.28 -0.86 7.11 99.48 0.71 -0.15 16 45 H -0.30 -1.18 7.11 99.48 0.71 -0.48 16 Total: 0.00 -17.47 376.65 1.24 -16.23 By element: Atomic # 1 Polarization: -11.55 SS G_CDS: -0.30 Total: -11.84 kcal Atomic # 6 Polarization: 3.37 SS G_CDS: 3.87 Total: 7.24 kcal Atomic # 7 Polarization: -0.05 SS G_CDS: -2.59 Total: -2.64 kcal Atomic # 8 Polarization: -7.27 SS G_CDS: -1.94 Total: -9.21 kcal Atomic # 14 Polarization: -1.97 SS G_CDS: 2.20 Total: 0.23 kcal Total: -17.47 1.24 -16.23 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12130084_13308374.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.556 kcal (2) G-P(sol) polarization free energy of solvation -17.469 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.914 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.244 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.225 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.670 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds