Wall clock time and date at job start Thu Mar 4 2021 13:27:02
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS WATER
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 O
2 2 C 1.42896 * 1
3 3 Si 1.86300 * 109.47241 * 2 1
4 4 C 1.50700 * 109.47341 * 240.00126 * 2 1 3
5 5 C 1.38264 * 119.94555 * 119.72100 * 4 2 1
6 6 C 1.38143 * 120.05501 * 179.73030 * 5 4 2
7 7 C 1.38739 * 119.94427 * 0.54557 * 6 5 4
8 8 O 1.35892 * 120.05532 * 179.75042 * 7 6 5
9 9 C 1.42900 * 117.00484 * 359.97438 * 8 7 6
10 10 C 1.52992 * 109.47451 * 180.02562 * 9 8 7
11 11 C 1.50701 * 109.47221 * 180.02562 * 10 9 8
12 12 O 1.21278 * 119.99923 * 359.97438 * 11 10 9
13 13 N 1.34776 * 119.99984 * 179.97438 * 11 10 9
14 14 C 1.46505 * 120.00158 * 179.97438 * 13 11 10
15 15 C 1.52992 * 109.47395 * 180.02562 * 14 13 11
16 16 H 1.09003 * 112.84737 * 314.66632 * 15 14 13
17 17 C 1.53775 * 113.61916 * 85.86327 * 15 14 13
18 18 C 1.53948 * 87.02362 * 139.95105 * 17 15 14
19 19 H 1.09003 * 113.61093 * 89.20074 * 18 17 15
20 20 C 1.50695 * 113.67080 * 220.06789 * 18 17 15
21 21 C 1.38246 * 119.99849 * 37.28631 * 20 18 17
22 22 C 1.38229 * 119.99651 * 179.78676 * 21 20 18
23 23 C 1.38233 * 120.00466 * 0.46549 * 22 21 20
24 24 C 1.38240 * 119.99888 * 359.76780 * 23 22 21
25 25 C 1.38233 * 120.00382 * 217.55827 * 20 18 17
26 26 C 1.53782 * 113.61650 * 183.47462 * 15 14 13
27 27 C 1.38732 * 119.88547 * 359.73141 * 7 6 5
28 28 C 1.38149 * 119.94758 * 359.97438 * 27 7 6
29 29 H 0.96693 * 114.00306 * 59.99646 * 1 2 3
30 30 H 1.09000 * 109.47349 * 120.00016 * 2 1 3
31 31 H 1.48506 * 110.00048 * 298.68597 * 3 2 1
32 32 H 1.48502 * 109.99996 * 59.99922 * 3 2 1
33 33 H 1.08002 * 119.97450 * 359.97438 * 5 4 2
34 34 H 1.08000 * 120.02735 * 180.28019 * 6 5 4
35 35 H 1.09008 * 109.46594 * 300.00118 * 9 8 7
36 36 H 1.08998 * 109.47165 * 59.99866 * 9 8 7
37 37 H 1.09008 * 109.47192 * 299.99598 * 10 9 8
38 38 H 1.08998 * 109.47170 * 59.99717 * 10 9 8
39 39 H 0.96998 * 120.00074 * 359.97438 * 13 11 10
40 40 H 1.08997 * 109.47148 * 300.00413 * 14 13 11
41 41 H 1.09005 * 109.46669 * 59.99970 * 14 13 11
42 42 H 1.09004 * 113.61824 * 254.53621 * 17 15 14
43 43 H 1.09003 * 113.61103 * 25.43188 * 17 15 14
44 44 H 1.08000 * 119.99272 * 0.02562 * 21 20 18
45 45 H 1.08006 * 119.99793 * 180.25162 * 22 21 20
46 46 H 1.07995 * 120.00133 * 179.78801 * 23 22 21
47 47 H 1.07994 * 119.99727 * 180.02562 * 24 23 22
48 48 H 1.07996 * 119.99886 * 359.97438 * 25 20 18
49 49 H 1.09003 * 113.61042 * 334.56153 * 26 15 14
50 50 H 1.08994 * 113.61785 * 105.38180 * 26 15 14
51 51 H 1.08000 * 120.02660 * 179.97438 * 27 7 6
52 52 H 1.07992 * 119.97601 * 179.97438 * 28 27 7
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 8 0.0000 0.0000 0.0000
2 6 1.4290 0.0000 0.0000
3 14 2.0500 1.7564 0.0000
4 6 1.9313 -0.7104 -1.2305
5 6 2.7214 -0.0356 -2.1427
6 6 3.1878 -0.6862 -3.2686
7 6 2.8534 -2.0145 -3.4893
8 8 3.3068 -2.6552 -4.5987
9 6 4.1231 -1.8999 -5.4961
10 6 4.5341 -2.7819 -6.6767
11 6 5.3954 -1.9856 -7.6227
12 8 5.6546 -0.8266 -7.3771
13 7 5.8777 -2.5615 -8.7417
14 6 6.7147 -1.7872 -9.6617
15 6 7.1258 -2.6692 -10.8423
16 1 7.4621 -3.6592 -10.5340
17 6 6.0919 -2.6966 -11.9803
18 6 7.2826 -2.6517 -12.9551
19 1 7.6620 -3.6369 -13.2266
20 6 7.0528 -1.7634 -14.1505
21 6 6.3565 -0.5778 -14.0068
22 6 6.1495 0.2392 -15.1025
23 6 6.6303 -0.1340 -16.3437
24 6 7.3224 -1.3219 -16.4882
25 6 7.5333 -2.1367 -15.3917
26 6 8.0796 -1.9739 -11.8280
27 6 2.0558 -2.6876 -2.5753
28 6 1.5969 -2.0343 -1.4478
29 1 -0.3933 0.4417 -0.7649
30 1 1.7923 -0.5138 0.8900
31 1 1.5878 2.4586 -1.2242
32 1 1.5615 2.4679 1.2085
33 1 2.9775 0.9998 -1.9730
34 1 3.8086 -0.1600 -3.9786
35 1 3.5610 -1.0410 -5.8630
36 1 5.0145 -1.5542 -4.9728
37 1 5.0960 -3.6411 -6.3101
38 1 3.6424 -3.1274 -7.1999
39 1 5.6707 -3.4886 -8.9380
40 1 6.1528 -0.9284 -10.0287
41 1 7.6061 -1.4414 -9.1383
42 1 5.5209 -3.6238 -12.0294
43 1 5.4620 -1.8079 -12.0193
44 1 5.9777 -0.2881 -13.0378
45 1 5.6091 1.1674 -14.9895
46 1 6.4656 0.5027 -17.2003
47 1 7.6984 -1.6132 -17.4578
48 1 8.0737 -3.0649 -15.5047
49 1 7.9941 -0.8873 -11.8253
50 1 9.1113 -2.3175 -11.7533
51 1 1.7937 -3.7215 -2.7451
52 1 0.9756 -2.5577 -0.7363
There are 68 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 68
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=WATER
m_22_12130084_4549602.mol2 52
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Thu Mar 4 2021 13:27:02
Heat of formation + Delta-G solvation = -30.295937 kcal
Electronic energy + Delta-G solvation = -30613.710904 eV
Core-core repulsion = 26317.542751 eV
Total energy + Delta-G solvation = -4296.168153 eV
No. of doubly occupied orbitals = 68
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 368.182 amu
Computer time = 1.53 seconds
Orbital eigenvalues (eV)
-41.45121 -41.20008 -40.56917 -39.23079 -38.89836 -37.30638 -35.64407 -33.46012
-32.28941 -31.99544 -31.76976 -31.43529 -28.89062 -26.64726 -26.52646 -25.59337
-24.50088 -23.55814 -23.37740 -22.21499 -21.89486 -21.35816 -20.08782 -19.49534
-18.44335 -18.08323 -17.58561 -17.50935 -17.22579 -16.91758 -16.54864 -16.34399
-16.28335 -16.11468 -15.98193 -15.62566 -15.48432 -14.88929 -14.71418 -14.65398
-14.54253 -14.39039 -14.29831 -14.23889 -14.03508 -13.78558 -13.48770 -13.37786
-13.06576 -12.88123 -12.82306 -12.65620 -12.32709 -12.29459 -12.06573 -12.02929
-11.78688 -11.61469 -11.48501 -11.40728 -11.25711 -10.92719 -10.61002 -10.13316
-10.04089 -9.83206 -9.54844 -9.22181 -4.93791 0.27622 0.30358 0.43122
0.48784 1.31303 1.53774 1.58122 1.72332 1.93490 2.50915 2.64933
2.83865 3.42659 3.53451 3.57847 3.59766 3.67417 3.72896 3.82557
3.90245 3.90724 3.98325 4.04436 4.05798 4.11580 4.18067 4.25757
4.27054 4.31517 4.34967 4.45007 4.48080 4.57018 4.61635 4.63128
4.66885 4.69297 4.75117 4.78987 4.83472 4.89464 4.95058 4.97506
5.08840 5.11880 5.14821 5.17843 5.22212 5.28532 5.38972 5.48686
5.50674 5.58627 5.63379 5.71895 5.77509 6.12155 6.31809 6.47829
6.48568 7.16997
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 O -0.548 6.548
2 C -0.074 4.074
3 Si 0.758 3.242
4 C -0.159 4.159
5 C -0.080 4.080
6 C -0.210 4.210
7 C 0.123 3.877
8 O -0.321 6.321
9 C 0.072 3.928
10 C -0.132 4.132
11 C 0.517 3.483
12 O -0.587 6.587
13 N -0.713 5.713
14 C 0.130 3.870
15 C -0.109 4.109
16 H 0.117 0.883
17 C -0.126 4.126
18 C -0.074 4.074
19 H 0.109 0.891
20 C -0.078 4.078
21 C -0.128 4.128
22 C -0.132 4.132
23 C -0.139 4.139
24 C -0.130 4.130
25 C -0.130 4.130
26 C -0.120 4.120
27 C -0.158 4.158
28 C -0.059 4.059
29 H 0.385 0.615
30 H 0.127 0.873
31 H -0.287 1.287
32 H -0.301 1.301
33 H 0.143 0.857
34 H 0.139 0.861
35 H 0.063 0.937
36 H 0.067 0.933
37 H 0.128 0.872
38 H 0.126 0.874
39 H 0.419 0.581
40 H 0.057 0.943
41 H 0.059 0.941
42 H 0.081 0.919
43 H 0.080 0.920
44 H 0.128 0.872
45 H 0.131 0.869
46 H 0.132 0.868
47 H 0.134 0.866
48 H 0.134 0.866
49 H 0.078 0.922
50 H 0.079 0.921
51 H 0.142 0.858
52 H 0.141 0.859
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges 2.954 -4.624 -3.380 6.444
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 O -0.356 6.356
2 C -0.183 4.183
3 Si 0.664 3.336
4 C -0.159 4.159
5 C -0.097 4.097
6 C -0.229 4.229
7 C 0.078 3.922
8 O -0.235 6.235
9 C -0.003 4.003
10 C -0.172 4.172
11 C 0.304 3.696
12 O -0.467 6.467
13 N -0.365 5.365
14 C 0.007 3.993
15 C -0.128 4.128
16 H 0.135 0.865
17 C -0.163 4.163
18 C -0.092 4.092
19 H 0.127 0.873
20 C -0.078 4.078
21 C -0.146 4.146
22 C -0.150 4.150
23 C -0.157 4.157
24 C -0.148 4.148
25 C -0.148 4.148
26 C -0.158 4.158
27 C -0.177 4.177
28 C -0.077 4.077
29 H 0.234 0.766
30 H 0.144 0.856
31 H -0.214 1.214
32 H -0.230 1.230
33 H 0.160 0.840
34 H 0.157 0.843
35 H 0.082 0.918
36 H 0.086 0.914
37 H 0.146 0.854
38 H 0.144 0.856
39 H 0.256 0.744
40 H 0.075 0.925
41 H 0.077 0.923
42 H 0.100 0.900
43 H 0.098 0.902
44 H 0.145 0.855
45 H 0.149 0.851
46 H 0.150 0.850
47 H 0.152 0.848
48 H 0.152 0.848
49 H 0.096 0.904
50 H 0.098 0.902
51 H 0.160 0.840
52 H 0.158 0.842
Dipole moment (debyes) X Y Z Total
from point charges 3.007 -3.495 -2.757 5.372
hybrid contribution -1.104 0.022 -0.881 1.413
sum 1.902 -3.472 -3.639 5.377
Atomic orbital electron populations
1.86558 1.18609 1.80292 1.50173 1.25090 0.83301 1.11251 0.98660
0.94163 0.90606 0.72593 0.76252 1.20256 1.02006 0.95560 0.98126
1.20991 0.95906 0.99904 0.92936 1.21415 1.05976 0.94409 1.01073
1.19191 0.94496 0.91412 0.87116 1.85954 1.65253 1.40719 1.31554
1.22459 0.94138 0.94128 0.89589 1.21433 1.01917 0.99555 0.94269
1.20657 0.79851 0.86939 0.82147 1.90739 1.60859 1.19368 1.75759
1.45857 1.51822 1.16733 1.22122 1.21345 0.93997 0.94284 0.89703
1.22714 0.97555 1.00263 0.92253 0.86527 1.23196 0.95805 1.03146
0.94130 1.21572 0.98278 0.98502 0.90839 0.87322 1.19953 0.97439
0.95422 0.95009 1.21196 0.99526 0.94727 0.99162 1.21420 1.00150
1.00248 0.93179 1.21434 0.98803 0.97434 0.98064 1.21448 0.98891
0.94890 0.99579 1.21349 1.00477 1.00519 0.92480 1.22991 0.98838
1.00144 0.93872 1.20676 1.00901 1.01611 0.94490 1.20978 0.97002
0.93654 0.96040 0.76569 0.85564 1.21394 1.22957 0.83973 0.84301
0.91836 0.91440 0.85406 0.85622 0.74376 0.92495 0.92267 0.89993
0.90195 0.85453 0.85140 0.85049 0.84823 0.84811 0.90356 0.90250
0.83999 0.84159
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 15.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 O -0.55 -1.86 12.77 -148.98 -1.90 -3.76 16
2 C -0.07 -0.03 2.82 71.24 0.20 0.17 16
3 Si 0.76 -0.28 29.78 68.60 2.04 1.76 16
4 C -0.16 -0.25 5.39 -19.85 -0.11 -0.36 16
5 C -0.08 -0.11 8.66 22.25 0.19 0.08 16
6 C -0.21 -0.61 9.04 22.37 0.20 -0.41 16
7 C 0.12 0.50 6.69 22.51 0.15 0.65 16
8 O -0.32 -0.98 10.14 -92.34 -0.94 -1.91 16
9 C 0.07 0.04 4.03 71.98 0.29 0.33 16
10 C -0.13 0.64 6.07 29.85 0.18 0.82 16
11 C 0.52 0.07 7.83 87.66 0.69 0.75 16
12 O -0.59 -5.62 15.98 -3.02 -0.05 -5.67 16
13 N -0.71 3.66 5.56 -463.06 -2.57 1.09 16
14 C 0.13 -0.42 5.50 86.38 0.47 0.05 16
15 C -0.11 0.80 3.75 -10.27 -0.04 0.76 16
16 H 0.12 -1.20 8.14 -2.39 -0.02 -1.22 16
17 C -0.13 0.76 7.02 31.18 0.22 0.98 16
18 C -0.07 0.32 3.98 -10.96 -0.04 0.27 16
19 H 0.11 -0.66 8.09 -2.39 -0.02 -0.68 16
20 C -0.08 -0.02 5.29 -19.87 -0.11 -0.13 16
21 C -0.13 -0.16 8.63 22.27 0.19 0.03 16
22 C -0.13 -0.26 10.05 22.27 0.22 -0.04 16
23 C -0.14 -0.26 10.05 22.27 0.22 -0.04 16
24 C -0.13 -0.18 10.05 22.27 0.22 0.04 16
25 C -0.13 -0.11 9.71 22.27 0.22 0.11 16
26 C -0.12 0.58 7.11 31.12 0.22 0.81 16
27 C -0.16 -0.45 9.99 22.37 0.22 -0.23 16
28 C -0.06 -0.12 9.61 22.26 0.21 0.09 16
29 H 0.39 -0.69 8.70 -74.06 -0.64 -1.34 16
30 H 0.13 -0.18 7.96 -2.39 -0.02 -0.20 16
31 H -0.29 -1.12 7.11 99.48 0.71 -0.42 16
32 H -0.30 -2.13 7.11 99.48 0.71 -1.43 16
33 H 0.14 -0.32 4.87 -2.91 -0.01 -0.33 16
34 H 0.14 0.18 6.30 -2.91 -0.02 0.16 16
35 H 0.06 0.13 7.62 -2.38 -0.02 0.12 16
36 H 0.07 0.11 7.62 -2.39 -0.02 0.09 16
37 H 0.13 -1.11 8.14 -2.38 -0.02 -1.13 16
38 H 0.13 -1.05 8.14 -2.39 -0.02 -1.07 16
39 H 0.42 -4.78 8.47 -92.71 -0.79 -5.57 16
40 H 0.06 -0.01 7.87 -2.39 -0.02 -0.03 16
41 H 0.06 -0.02 8.14 -2.38 -0.02 -0.04 16
42 H 0.08 -0.62 8.14 -2.39 -0.02 -0.64 16
43 H 0.08 -0.32 6.08 -2.39 -0.01 -0.34 16
44 H 0.13 -0.13 6.65 -2.91 -0.02 -0.15 16
45 H 0.13 -0.13 8.06 -2.91 -0.02 -0.15 16
46 H 0.13 -0.17 8.06 -2.91 -0.02 -0.19 16
47 H 0.13 -0.27 8.06 -2.91 -0.02 -0.29 16
48 H 0.13 -0.36 8.05 -2.91 -0.02 -0.39 16
49 H 0.08 -0.21 7.69 -2.39 -0.02 -0.23 16
50 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16
51 H 0.14 0.04 8.06 -2.91 -0.02 0.01 16
52 H 0.14 0.01 8.06 -2.91 -0.02 -0.01 16
Total: 0.00 -19.83 424.81 0.17 -19.65
By element:
Atomic # 1 Polarization: -15.45 SS G_CDS: -0.45 Total: -15.91 kcal
Atomic # 6 Polarization: 0.70 SS G_CDS: 4.04 Total: 4.74 kcal
Atomic # 7 Polarization: 3.66 SS G_CDS: -2.57 Total: 1.09 kcal
Atomic # 8 Polarization: -8.45 SS G_CDS: -2.89 Total: -11.34 kcal
Atomic # 14 Polarization: -0.28 SS G_CDS: 2.04 Total: 1.76 kcal
Total: -19.83 0.17 -19.65 kcal
The number of atoms in the molecule is 52
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
m_22_12130084_4549602.mol2 52
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -10.643 kcal
(2) G-P(sol) polarization free energy of solvation -19.827 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.470 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.174 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.652 kcal
(6) G-S(sol) free energy of system = (1) + (5) -30.296 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 1.53 seconds