Wall clock time and date at job start Thu Mar 4 2021 13:27:35
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS WATER
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 O
2 2 C 1.42898 * 1
3 3 Si 1.86298 * 109.47336 * 2 1
4 4 C 1.50704 * 109.46990 * 240.00120 * 2 1 3
5 5 C 1.38236 * 119.94265 * 299.99937 * 4 2 1
6 6 C 1.38173 * 120.05573 * 180.02562 * 5 4 2
7 7 N 1.47999 * 120.02901 * 180.02562 * 6 5 4
8 8 O 1.21802 * 120.00333 * 0.02562 * 7 6 5
9 9 O 1.21804 * 119.99935 * 180.02562 * 7 6 5
10 10 C 1.38704 * 119.94115 * 0.02562 * 6 5 4
11 11 O 1.35908 * 120.05303 * 179.97438 * 10 6 5
12 12 C 1.42898 * 116.99594 * 180.02562 * 11 10 6
13 13 C 1.50706 * 109.47060 * 179.97438 * 12 11 10
14 14 O 1.21281 * 119.99699 * 359.97438 * 13 12 11
15 15 N 1.34773 * 120.00080 * 180.02562 * 13 12 11
16 16 C 1.46506 * 119.99969 * 180.02562 * 15 13 12
17 17 C 1.52998 * 109.47237 * 179.72043 * 16 15 13
18 18 H 1.09002 * 112.84900 * 43.80541 * 17 16 15
19 19 C 1.53782 * 113.61474 * 174.99495 * 17 16 15
20 20 C 1.53780 * 87.07932 * 139.97980 * 19 17 16
21 21 H 1.09011 * 113.60819 * 89.11953 * 20 19 17
22 22 C 1.50701 * 113.61678 * 219.93524 * 20 19 17
23 23 C 1.38234 * 119.99563 * 59.73308 * 22 20 19
24 24 C 1.38236 * 119.99359 * 179.74888 * 23 22 20
25 25 C 1.38234 * 120.00120 * 0.51913 * 24 23 22
26 26 C 1.38233 * 120.00221 * 359.75472 * 25 24 23
27 27 C 1.38234 * 119.99763 * 240.00434 * 22 20 19
28 28 C 1.53778 * 113.61504 * 272.49537 * 17 16 15
29 29 C 1.38754 * 119.89058 * 0.25441 * 10 6 5
30 30 C 1.38118 * 119.94202 * 359.47249 * 29 10 6
31 31 H 0.96698 * 113.99910 * 300.00322 * 1 2 3
32 32 H 1.09000 * 109.47119 * 120.00413 * 2 1 3
33 33 H 1.48504 * 110.00277 * 178.67805 * 3 2 1
34 34 H 1.48498 * 110.00111 * 300.00177 * 3 2 1
35 35 H 1.07997 * 119.97622 * 0.02562 * 5 4 2
36 36 H 1.09004 * 109.47454 * 60.00038 * 12 11 10
37 37 H 1.08998 * 109.47671 * 299.99818 * 12 11 10
38 38 H 0.97005 * 120.00161 * 359.72088 * 15 13 12
39 39 H 1.09001 * 109.46512 * 299.72412 * 16 15 13
40 40 H 1.08998 * 109.47174 * 59.71534 * 16 15 13
41 41 H 1.08995 * 113.61743 * 254.53089 * 19 17 16
42 42 H 1.09004 * 113.60877 * 25.43489 * 19 17 16
43 43 H 1.07990 * 120.00442 * 359.97438 * 23 22 20
44 44 H 1.07994 * 119.99847 * 180.29789 * 24 23 22
45 45 H 1.08004 * 119.99929 * 179.77210 * 25 24 23
46 46 H 1.08000 * 120.00236 * 179.97438 * 26 25 24
47 47 H 1.07996 * 120.00238 * 359.97438 * 27 22 20
48 48 H 1.08991 * 113.61424 * 334.56676 * 28 17 16
49 49 H 1.09002 * 113.61088 * 105.47232 * 28 17 16
50 50 H 1.08003 * 120.02689 * 179.72982 * 29 10 6
51 51 H 1.08000 * 119.97224 * 180.27715 * 30 29 10
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 8 0.0000 0.0000 0.0000
2 6 1.4290 0.0000 0.0000
3 14 2.0500 1.7564 0.0000
4 6 1.9313 -0.7104 -1.2305
5 6 1.5966 -2.0339 -1.4481
6 6 2.0563 -2.6876 -2.5753
7 7 1.6972 -4.1044 -2.8079
8 8 0.9957 -4.6945 -2.0059
9 8 2.1031 -4.6803 -3.8015
10 6 2.8547 -2.0149 -3.4885
11 8 3.3085 -2.6559 -4.5976
12 6 4.1263 -1.9011 -5.4940
13 6 4.5325 -2.7704 -6.6562
14 8 4.1589 -3.9229 -6.7110
15 7 5.3118 -2.2673 -7.6339
16 6 5.7063 -3.1122 -8.7639
17 6 6.5767 -2.3023 -9.7269
18 1 7.3251 -1.6978 -9.2144
19 6 7.1463 -3.1327 -10.8892
20 6 6.8596 -1.9210 -11.7917
21 1 7.6851 -1.2110 -11.8446
22 6 6.3198 -2.2931 -13.1486
23 6 5.1363 -3.0000 -13.2515
24 6 4.6385 -3.3368 -14.4963
25 6 5.3297 -2.9760 -15.6378
26 6 6.5160 -2.2740 -15.5347
27 6 7.0110 -1.9323 -14.2900
28 6 5.7705 -1.5250 -10.7807
29 6 3.1940 -0.6882 -3.2648
30 6 2.7272 -0.0376 -2.1394
31 1 -0.3933 0.4417 0.7650
32 1 1.7923 -0.5139 0.8899
33 1 3.5347 1.7703 0.0322
34 1 1.5615 2.4679 -1.2084
35 1 0.9753 -2.5573 -0.7366
36 1 5.0176 -1.5562 -4.9698
37 1 3.5654 -1.0417 -5.8614
38 1 5.6079 -1.3445 -7.5917
39 1 6.2709 -3.9693 -8.3969
40 1 4.8149 -3.4608 -9.2855
41 1 8.2075 -3.3585 -10.7856
42 1 6.5475 -4.0102 -11.1333
43 1 4.5988 -3.2860 -12.3595
44 1 3.7115 -3.8849 -14.5769
45 1 4.9426 -3.2423 -16.6103
46 1 7.0562 -1.9924 -16.4266
47 1 7.9376 -1.3834 -14.2095
48 1 4.7958 -1.9630 -10.9952
49 1 5.7212 -0.4531 -10.5894
50 1 3.8191 -0.1636 -3.9723
51 1 2.9874 0.9964 -1.9671
There are 73 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 73
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=WATER
m_22_12130084_4549638.mol2 51
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Thu Mar 4 2021 13:27:35
Heat of formation + Delta-G solvation = -14.893977 kcal
Electronic energy + Delta-G solvation = -35686.127560 eV
Core-core repulsion = 30715.148470 eV
Total energy + Delta-G solvation = -4970.979090 eV
No. of doubly occupied orbitals = 73
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 399.161 amu
Computer time = 1.69 seconds
Orbital eigenvalues (eV)
-43.38256 -41.88395 -41.26817 -40.61464 -39.46839 -38.88173 -37.65377 -37.40798
-35.73700 -33.66218 -32.51902 -32.31721 -31.79303 -30.57230 -28.23170 -27.91799
-26.64333 -26.51775 -24.80337 -24.05985 -23.56096 -22.81274 -21.97484 -21.70045
-20.54225 -20.10920 -19.86575 -19.27502 -18.75496 -18.67661 -18.36482 -17.79833
-17.70724 -17.49822 -16.99025 -16.57179 -16.47694 -16.18131 -16.01802 -15.97697
-15.52728 -15.39451 -15.11683 -14.76349 -14.56506 -14.49310 -14.27651 -14.19504
-14.03884 -13.84715 -13.83225 -13.39910 -13.08380 -13.03936 -12.77044 -12.74939
-12.67065 -12.44814 -12.35088 -12.32936 -12.22687 -12.04882 -11.97690 -11.50087
-11.42617 -11.28429 -10.98836 -10.97104 -10.43245 -10.23154 -9.85564 -9.84548
-9.56191 -4.89598 -1.41739 -0.36814 0.04207 0.24693 0.41766 0.47371
1.12408 1.27174 1.39390 1.67973 1.89374 1.91963 2.26074 2.82228
2.96911 3.07410 3.23494 3.44490 3.48225 3.52269 3.56314 3.57283
3.70984 3.81555 3.90384 3.92986 3.97561 4.03735 4.09786 4.13199
4.16421 4.23159 4.25230 4.28944 4.39725 4.45882 4.48568 4.60041
4.61403 4.68787 4.71186 4.81889 4.87336 4.92685 4.94506 5.06248
5.09638 5.10231 5.13306 5.18994 5.30688 5.48079 5.57256 5.62092
5.62973 5.76210 6.10856 6.36764 6.39372 6.85971 7.09545
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 O -0.568 6.568
2 C -0.088 4.088
3 Si 0.779 3.221
4 C -0.117 4.117
5 C 0.002 3.998
6 C -0.101 4.101
7 N 0.034 4.966
8 O -0.189 6.189
9 O -0.174 6.174
10 C 0.193 3.807
11 O -0.288 6.288
12 C 0.023 3.977
13 C 0.507 3.493
14 O -0.567 6.567
15 N -0.704 5.704
16 C 0.131 3.869
17 C -0.107 4.107
18 H 0.123 0.877
19 C -0.123 4.123
20 C -0.073 4.073
21 H 0.112 0.888
22 C -0.078 4.078
23 C -0.129 4.129
24 C -0.133 4.133
25 C -0.139 4.139
26 C -0.130 4.130
27 C -0.129 4.129
28 C -0.125 4.125
29 C -0.189 4.189
30 C -0.027 4.027
31 H 0.407 0.593
32 H 0.099 0.901
33 H -0.270 1.270
34 H -0.282 1.282
35 H 0.161 0.839
36 H 0.143 0.857
37 H 0.141 0.859
38 H 0.423 0.577
39 H 0.058 0.942
40 H 0.055 0.945
41 H 0.080 0.920
42 H 0.075 0.925
43 H 0.126 0.874
44 H 0.129 0.871
45 H 0.131 0.869
46 H 0.135 0.865
47 H 0.136 0.864
48 H 0.077 0.923
49 H 0.085 0.915
50 H 0.203 0.797
51 H 0.163 0.837
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges 5.725 14.880 2.811 16.190
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 O -0.379 6.379
2 C -0.196 4.196
3 Si 0.681 3.319
4 C -0.118 4.118
5 C -0.017 4.017
6 C -0.186 4.186
7 N 0.546 4.454
8 O -0.400 6.400
9 O -0.387 6.387
10 C 0.144 3.856
11 O -0.198 6.198
12 C -0.054 4.054
13 C 0.292 3.708
14 O -0.445 6.445
15 N -0.359 5.359
16 C 0.008 3.992
17 C -0.125 4.125
18 H 0.141 0.859
19 C -0.161 4.161
20 C -0.091 4.091
21 H 0.130 0.870
22 C -0.078 4.078
23 C -0.147 4.147
24 C -0.151 4.151
25 C -0.157 4.157
26 C -0.148 4.148
27 C -0.147 4.147
28 C -0.163 4.163
29 C -0.207 4.207
30 C -0.044 4.044
31 H 0.259 0.741
32 H 0.117 0.883
33 H -0.196 1.196
34 H -0.209 1.209
35 H 0.179 0.821
36 H 0.161 0.839
37 H 0.158 0.842
38 H 0.261 0.739
39 H 0.076 0.924
40 H 0.073 0.927
41 H 0.098 0.902
42 H 0.094 0.906
43 H 0.144 0.856
44 H 0.147 0.853
45 H 0.149 0.851
46 H 0.153 0.847
47 H 0.154 0.846
48 H 0.096 0.904
49 H 0.104 0.896
50 H 0.220 0.780
51 H 0.180 0.820
Dipole moment (debyes) X Y Z Total
from point charges 6.164 14.750 1.828 16.091
hybrid contribution -0.287 -1.286 -0.559 1.431
sum 5.877 13.464 1.270 14.746
Atomic orbital electron populations
1.86444 1.17110 1.82698 1.51606 1.25023 0.86232 1.12330 0.96006
0.93445 0.78098 0.74291 0.86077 1.19695 1.00823 0.92432 0.98888
1.20887 0.93620 0.94432 0.92747 1.20877 1.12964 0.81937 1.02863
1.43791 0.98339 1.03699 0.99575 1.94494 1.35422 1.68041 1.42004
1.94689 1.56507 1.69106 1.18385 1.18865 0.89846 0.91721 0.85213
1.86478 1.63586 1.39519 1.30210 1.23133 0.98009 0.94597 0.89624
1.20438 0.78756 0.87613 0.84000 1.90851 1.55195 1.20215 1.78195
1.45624 1.51403 1.16880 1.22003 1.21377 0.98159 0.93559 0.86133
1.22723 0.98203 0.97909 0.93662 0.85949 1.23013 1.02012 0.96687
0.94364 1.21547 0.99378 0.98733 0.89411 0.87026 1.19957 0.94817
0.97593 0.95463 1.21190 0.96560 0.99176 0.97789 1.21415 1.00509
1.00246 0.92929 1.21431 0.95946 0.99141 0.99203 1.21456 0.96469
0.98465 0.98394 1.21354 1.00513 1.00656 0.92172 1.23173 0.97282
1.01369 0.94432 1.21682 1.06131 0.91016 1.01904 1.21493 0.91664
1.00184 0.91101 0.74063 0.88325 1.19583 1.20907 0.82100 0.83941
0.84193 0.73921 0.92389 0.92653 0.90154 0.90621 0.85643 0.85307
0.85069 0.84745 0.84643 0.90429 0.89615 0.78020 0.82005
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 15.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 O -0.57 2.33 12.74 -148.98 -1.90 0.44 16
2 C -0.09 0.53 2.81 71.24 0.20 0.73 16
3 Si 0.78 -7.65 29.78 68.60 2.04 -5.61 16
4 C -0.12 0.08 5.42 -19.85 -0.11 -0.03 16
5 C 0.00 0.01 9.11 22.25 0.20 0.21 16
6 C -0.10 -0.99 6.87 36.48 0.25 -0.74 16
7 N 0.03 0.62 4.45 -46.25 -0.21 0.41 16
8 O -0.19 -3.62 18.45 18.88 0.35 -3.27 16
9 O -0.17 -4.01 17.24 25.60 0.44 -3.57 16
10 C 0.19 0.81 6.67 22.50 0.15 0.96 16
11 O -0.29 -2.05 7.68 -63.49 -0.49 -2.54 16
12 C 0.02 -0.11 5.22 71.24 0.37 0.26 16
13 C 0.51 1.36 7.91 87.66 0.69 2.05 16
14 O -0.57 -9.40 16.50 16.00 0.26 -9.14 16
15 N -0.70 3.76 5.56 -463.05 -2.57 1.19 16
16 C 0.13 -0.31 5.51 86.38 0.48 0.17 16
17 C -0.11 0.82 3.75 -10.27 -0.04 0.78 16
18 H 0.12 -1.43 8.14 -2.39 -0.02 -1.45 16
19 C -0.12 0.56 7.11 31.12 0.22 0.78 16
20 C -0.07 0.32 3.98 -11.01 -0.04 0.28 16
21 H 0.11 -0.76 8.09 -2.38 -0.02 -0.78 16
22 C -0.08 -0.04 5.29 -19.87 -0.11 -0.15 16
23 C -0.13 -0.27 8.60 22.27 0.19 -0.08 16
24 C -0.13 -0.38 10.05 22.27 0.22 -0.16 16
25 C -0.14 -0.35 10.05 22.27 0.22 -0.12 16
26 C -0.13 -0.22 10.05 22.27 0.22 0.01 16
27 C -0.13 -0.11 9.71 22.27 0.22 0.10 16
28 C -0.13 0.80 7.01 31.12 0.22 1.02 16
29 C -0.19 1.00 9.04 22.36 0.20 1.20 16
30 C -0.03 0.12 8.66 22.25 0.19 0.31 16
31 H 0.41 -5.85 8.74 -74.06 -0.65 -6.50 16
32 H 0.10 -0.93 7.96 -2.39 -0.02 -0.95 16
33 H -0.27 1.78 7.11 99.48 0.71 2.48 16
34 H -0.28 1.09 7.11 99.48 0.71 1.80 16
35 H 0.16 0.77 7.61 -2.91 -0.02 0.74 16
36 H 0.14 -1.93 7.65 -2.39 -0.02 -1.95 16
37 H 0.14 -1.82 7.67 -2.39 -0.02 -1.84 16
38 H 0.42 -5.92 8.47 -92.70 -0.79 -6.71 16
39 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16
40 H 0.06 0.09 7.84 -2.39 -0.02 0.07 16
41 H 0.08 -0.42 8.14 -2.39 -0.02 -0.44 16
42 H 0.08 -0.12 7.67 -2.38 -0.02 -0.14 16
43 H 0.13 0.03 6.68 -2.92 -0.02 0.01 16
44 H 0.13 0.04 8.06 -2.91 -0.02 0.01 16
45 H 0.13 -0.08 8.06 -2.91 -0.02 -0.11 16
46 H 0.13 -0.25 8.06 -2.91 -0.02 -0.28 16
47 H 0.14 -0.40 8.05 -2.91 -0.02 -0.43 16
48 H 0.08 -0.29 6.09 -2.39 -0.01 -0.30 16
49 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16
50 H 0.20 -3.10 6.30 -2.91 -0.02 -3.12 16
51 H 0.16 -1.45 4.87 -2.91 -0.01 -1.46 16
Total: 0.00 -38.05 429.89 1.50 -36.55
By element:
Atomic # 1 Polarization: -21.64 SS G_CDS: -0.39 Total: -22.03 kcal
Atomic # 6 Polarization: 3.62 SS G_CDS: 3.96 Total: 7.58 kcal
Atomic # 7 Polarization: 4.38 SS G_CDS: -2.78 Total: 1.60 kcal
Atomic # 8 Polarization: -16.75 SS G_CDS: -1.33 Total: -18.09 kcal
Atomic # 14 Polarization: -7.65 SS G_CDS: 2.04 Total: -5.61 kcal
Total: -38.05 1.50 -36.55 kcal
The number of atoms in the molecule is 51
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
m_22_12130084_4549638.mol2 51
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute 21.652 kcal
(2) G-P(sol) polarization free energy of solvation -38.049 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.398 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.504 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.546 kcal
(6) G-S(sol) free energy of system = (1) + (5) -14.894 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 1.69 seconds