Wall clock time and date at job start Thu Mar 4 2021 13:28:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.33819 * 122.44897 * 2 1 4 4 C 1.50692 * 124.52037 * 359.97438 * 3 2 1 5 5 O 1.42903 * 109.47409 * 235.23102 * 4 3 2 6 6 Si 1.86305 * 109.47106 * 115.23418 * 4 3 2 7 7 S 1.70616 * 110.95273 * 180.02562 * 3 2 1 8 8 C 1.75829 * 91.56557 * 359.97438 * 7 3 2 9 9 C 1.46582 * 125.45883 * 180.02562 * 8 7 3 10 10 O 1.21703 * 119.99657 * 179.97438 * 9 8 7 11 11 N 1.34776 * 119.99867 * 359.96172 * 9 8 7 12 12 C 1.46504 * 119.99796 * 180.02562 * 11 9 8 13 13 C 1.52999 * 109.46937 * 179.97438 * 12 11 9 14 14 H 1.09000 * 112.84770 * 316.18965 * 13 12 11 15 15 C 1.53774 * 113.61449 * 87.50063 * 13 12 11 16 16 C 1.53785 * 87.08056 * 139.98089 * 15 13 12 17 17 H 1.08996 * 113.68998 * 89.13160 * 16 15 13 18 18 C 1.50702 * 113.61472 * 220.01760 * 16 15 13 19 19 C 1.38244 * 119.99626 * 37.22354 * 18 16 15 20 20 C 1.38235 * 119.99451 * 179.78551 * 19 18 16 21 21 C 1.38237 * 120.00342 * 0.46801 * 20 19 18 22 22 C 1.38235 * 119.99985 * 359.76259 * 21 20 19 23 23 C 1.38230 * 120.00373 * 217.49755 * 18 16 15 24 24 C 1.53777 * 87.07886 * 334.56775 * 16 15 13 25 25 C 1.36651 * 109.08453 * 0.02562 * 8 7 3 26 26 H 1.08995 * 109.47725 * 275.48189 * 1 2 3 27 27 H 1.08999 * 109.46965 * 35.48472 * 1 2 3 28 28 H 1.09010 * 109.47215 * 155.48197 * 1 2 3 29 29 H 1.08998 * 109.47679 * 355.23385 * 4 3 2 30 30 H 0.96696 * 113.99870 * 300.00482 * 5 4 3 31 31 H 1.48495 * 110.00079 * 180.02562 * 6 4 3 32 32 H 1.48503 * 109.99776 * 301.31722 * 6 4 3 33 33 H 0.96997 * 119.99954 * 359.97438 * 11 9 8 34 34 H 1.08997 * 109.46745 * 300.00022 * 12 11 9 35 35 H 1.08997 * 109.47178 * 59.99663 * 12 11 9 36 36 H 1.08997 * 113.61985 * 254.52996 * 15 13 12 37 37 H 1.09002 * 113.62004 * 25.43344 * 15 13 12 38 38 H 1.07998 * 120.00310 * 0.02562 * 19 18 16 39 39 H 1.08004 * 120.00192 * 180.25395 * 20 19 18 40 40 H 1.08002 * 120.00220 * 179.79021 * 21 20 19 41 41 H 1.07997 * 120.00457 * 180.02562 * 22 21 20 42 42 H 1.08009 * 119.99785 * 359.97438 * 23 18 16 43 43 H 1.09006 * 113.61709 * 270.88256 * 24 16 15 44 44 H 1.09002 * 113.69319 * 139.99642 * 24 16 15 45 45 H 1.07998 * 123.35383 * 179.73547 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1293 0.0000 4 6 1.6355 2.5161 -0.0006 5 8 2.1566 3.2548 -1.1073 6 14 2.0811 3.3809 1.5883 7 16 3.8969 0.7892 -0.0007 8 6 3.5937 -0.9427 -0.0002 9 6 4.6231 -1.9862 0.0000 10 8 4.3001 -3.1596 0.0008 11 7 5.9273 -1.6462 -0.0009 12 6 6.9562 -2.6892 -0.0012 13 6 8.3412 -2.0392 -0.0029 14 1 8.4158 -1.2037 -0.6988 15 6 8.8741 -1.7210 1.4041 16 6 10.2501 -2.1915 0.9037 17 1 10.8484 -1.3976 0.4567 18 6 11.0164 -3.0016 1.9174 19 6 10.3479 -3.8854 2.7440 20 6 11.0515 -4.6317 3.6707 21 6 12.4221 -4.4872 3.7777 22 6 13.0899 -3.6000 2.9544 23 6 12.3869 -2.8568 2.0246 24 6 9.4951 -3.0483 -0.1261 25 6 2.2446 -1.1601 -0.0001 26 1 -0.3634 0.0982 1.0229 27 1 -0.3633 0.8368 -0.5965 28 1 -0.3634 -0.9351 -0.4265 29 1 0.5509 2.4499 -0.0863 30 1 3.1184 3.3536 -1.0962 31 1 1.5050 4.7495 1.6004 32 1 1.5722 2.6059 2.7484 33 1 6.1847 -0.7110 -0.0021 34 1 6.8460 -3.3084 0.8891 35 1 6.8450 -3.3090 -0.8908 36 1 8.8397 -0.6608 1.6546 37 1 8.4530 -2.3551 2.1843 38 1 9.2766 -3.9956 2.6630 39 1 10.5298 -5.3252 4.3137 40 1 12.9713 -5.0678 4.5041 41 1 14.1607 -3.4873 3.0376 42 1 12.9086 -2.1633 1.3816 43 1 9.2437 -4.0454 0.2356 44 1 9.9610 -3.0607 -1.1115 45 1 1.8019 -2.1452 -0.0040 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12130084_6739946.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:28:30 Heat of formation + Delta-G solvation = 5.779854 kcal Electronic energy + Delta-G solvation = -26122.514959 eV Core-core repulsion = 22391.283227 eV Total energy + Delta-G solvation = -3731.231732 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.123 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -41.37280 -40.65910 -39.71072 -38.93421 -37.67436 -35.60965 -32.74779 -32.13296 -31.76465 -29.90699 -29.19042 -26.79849 -26.52589 -24.86686 -23.96225 -23.54294 -21.98153 -21.71672 -20.32992 -20.16073 -19.37117 -18.05041 -17.86007 -17.43807 -16.95885 -16.73355 -16.34983 -16.08825 -15.88454 -15.75395 -15.57960 -15.14817 -14.98520 -14.73170 -14.44915 -14.33898 -14.22992 -14.17659 -13.95252 -13.52831 -13.50659 -13.22739 -13.17581 -13.05444 -12.73065 -12.51848 -12.37776 -12.22679 -12.08889 -12.00111 -11.60219 -11.49858 -11.34828 -11.01160 -10.89651 -10.18945 -9.80571 -9.66426 -9.55078 -9.49464 -5.24498 -0.65971 0.26758 0.44354 0.51449 0.68175 1.01123 1.27239 1.54898 1.83393 2.02468 2.18283 2.84548 3.20555 3.41062 3.44965 3.45728 3.52970 3.73430 3.88213 3.97641 4.03173 4.06294 4.10055 4.13347 4.15651 4.25428 4.32111 4.38197 4.41615 4.56389 4.59598 4.61218 4.66588 4.71294 4.73735 4.78614 4.85337 4.91201 4.93403 5.03699 5.11384 5.16758 5.20515 5.28173 5.32322 5.38929 5.59207 5.65321 5.74556 6.11498 6.27751 6.35129 7.10192 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.102 4.102 2 C -0.103 4.103 3 C -0.230 4.230 4 C -0.036 4.036 5 O -0.532 6.532 6 Si 0.682 3.318 7 S 0.204 5.796 8 C -0.260 4.260 9 C 0.591 3.409 10 O -0.525 6.525 11 N -0.725 5.725 12 C 0.130 3.870 13 C -0.127 4.127 14 H 0.100 0.900 15 C -0.129 4.129 16 C -0.073 4.073 17 H 0.099 0.901 18 C -0.072 4.072 19 C -0.117 4.117 20 C -0.118 4.118 21 C -0.125 4.125 22 C -0.118 4.118 23 C -0.117 4.117 24 C -0.118 4.118 25 C -0.044 4.044 26 H 0.073 0.927 27 H 0.071 0.929 28 H 0.074 0.926 29 H 0.129 0.871 30 H 0.376 0.624 31 H -0.241 1.241 32 H -0.249 1.249 33 H 0.399 0.601 34 H 0.073 0.927 35 H 0.073 0.927 36 H 0.073 0.927 37 H 0.089 0.911 38 H 0.121 0.879 39 H 0.122 0.878 40 H 0.121 0.879 41 H 0.122 0.878 42 H 0.121 0.879 43 H 0.088 0.912 44 H 0.075 0.925 45 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.581 3.332 0.736 4.946 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C -0.115 4.115 3 C -0.349 4.349 4 C -0.148 4.148 5 O -0.338 6.338 6 Si 0.581 3.419 7 S 0.472 5.528 8 C -0.380 4.380 9 C 0.377 3.623 10 O -0.403 6.403 11 N -0.377 5.377 12 C 0.007 3.993 13 C -0.145 4.145 14 H 0.118 0.882 15 C -0.166 4.166 16 C -0.091 4.091 17 H 0.118 0.882 18 C -0.072 4.072 19 C -0.135 4.135 20 C -0.136 4.136 21 C -0.143 4.143 22 C -0.136 4.136 23 C -0.135 4.135 24 C -0.156 4.156 25 C -0.077 4.077 26 H 0.092 0.908 27 H 0.089 0.911 28 H 0.093 0.907 29 H 0.146 0.854 30 H 0.224 0.776 31 H -0.165 1.165 32 H -0.172 1.172 33 H 0.233 0.767 34 H 0.091 0.909 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.107 0.893 38 H 0.139 0.861 39 H 0.140 0.860 40 H 0.139 0.861 41 H 0.140 0.860 42 H 0.139 0.861 43 H 0.107 0.893 44 H 0.094 0.906 45 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 3.769 3.791 1.312 5.504 hybrid contribution -1.532 -0.860 -0.308 1.784 sum 2.237 2.931 1.004 3.822 Atomic orbital electron populations 1.20620 0.89200 1.03563 1.02666 1.18665 0.98112 0.90937 1.03831 1.24497 0.99055 1.00701 1.10653 1.24711 1.01215 0.88113 1.00745 1.86585 1.26625 1.74423 1.46124 0.95031 0.91408 0.80450 0.75022 1.82575 1.02649 0.98704 1.68843 1.24474 0.97991 0.96620 1.18910 1.16914 0.81613 0.87369 0.76369 1.90867 1.81612 1.18164 1.49659 1.45842 1.05369 1.10441 1.76031 1.21445 0.85015 0.89895 1.02913 1.22819 0.93070 0.99906 0.98748 0.88205 1.23216 0.95057 1.02132 0.96214 1.21481 0.94819 0.97694 0.95116 0.88246 1.19702 0.93667 0.97093 0.96731 1.21020 0.99885 0.96571 0.96046 1.21183 0.94474 0.99369 0.98560 1.21199 0.94688 0.98833 0.99535 1.21188 1.00003 0.96491 0.95947 1.21079 0.93716 0.99882 0.98818 1.23005 0.94971 0.98105 0.99556 1.20693 0.90957 1.00010 0.96076 0.90833 0.91051 0.90703 0.85438 0.77644 1.16514 1.17237 0.76700 0.90878 0.90853 0.90863 0.89299 0.86080 0.86047 0.86108 0.86047 0.86126 0.89334 0.90631 0.82604 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.08 9.58 36.01 0.34 0.42 16 2 C -0.10 -0.08 5.78 -106.45 -0.62 -0.69 16 3 C -0.23 0.05 4.62 -35.86 -0.17 -0.12 16 4 C -0.04 0.03 2.81 36.00 0.10 0.13 16 5 O -0.53 0.23 12.88 -35.23 -0.45 -0.23 16 6 Si 0.68 -1.04 32.59 -169.99 -5.54 -6.58 16 7 S 0.20 -0.36 21.00 -107.50 -2.26 -2.62 16 8 C -0.26 -0.34 6.45 -36.79 -0.24 -0.58 16 9 C 0.59 1.57 7.78 -12.90 -0.10 1.47 16 10 O -0.53 -3.40 16.84 5.19 0.09 -3.32 16 11 N -0.73 0.35 5.55 -61.65 -0.34 0.01 16 12 C 0.13 -0.11 5.51 -4.04 -0.02 -0.14 16 13 C -0.13 0.36 3.75 -89.81 -0.34 0.02 16 14 H 0.10 -0.37 8.14 -51.93 -0.42 -0.80 16 15 C -0.13 0.32 7.00 -25.92 -0.18 0.14 16 16 C -0.07 0.13 3.98 -90.96 -0.36 -0.23 16 17 H 0.10 -0.24 8.09 -51.93 -0.42 -0.66 16 18 C -0.07 -0.01 5.29 -104.62 -0.55 -0.56 16 19 C -0.12 -0.04 8.62 -39.58 -0.34 -0.38 16 20 C -0.12 -0.08 10.05 -39.58 -0.40 -0.47 16 21 C -0.12 -0.08 10.05 -39.58 -0.40 -0.48 16 22 C -0.12 -0.06 10.05 -39.58 -0.40 -0.46 16 23 C -0.12 -0.04 9.71 -39.58 -0.38 -0.43 16 24 C -0.12 0.26 7.11 -25.92 -0.18 0.07 16 25 C -0.04 -0.07 9.78 -40.43 -0.40 -0.47 16 26 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.07 -0.08 6.81 -51.93 -0.35 -0.43 16 28 H 0.07 -0.09 8.10 -51.92 -0.42 -0.51 16 29 H 0.13 -0.10 6.08 -51.93 -0.32 -0.41 16 30 H 0.38 -1.58 8.35 45.56 0.38 -1.20 16 31 H -0.24 -0.27 7.11 56.52 0.40 0.13 16 32 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 33 H 0.40 -1.15 7.59 -40.82 -0.31 -1.46 16 34 H 0.07 0.00 7.84 -51.93 -0.41 -0.41 16 35 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 36 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 37 H 0.09 -0.17 6.05 -51.93 -0.31 -0.48 16 38 H 0.12 -0.10 6.64 -52.49 -0.35 -0.45 16 39 H 0.12 -0.10 8.06 -52.48 -0.42 -0.52 16 40 H 0.12 -0.10 8.06 -52.49 -0.42 -0.53 16 41 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 42 H 0.12 -0.14 8.06 -52.48 -0.42 -0.57 16 43 H 0.09 -0.14 7.69 -51.93 -0.40 -0.54 16 44 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 45 H 0.16 0.24 8.06 -52.49 -0.42 -0.19 16 LS Contribution 385.25 15.07 5.81 5.81 Total: 0.00 -7.66 385.25 -13.66 -21.33 By element: Atomic # 1 Polarization: -5.30 SS G_CDS: -6.33 Total: -11.63 kcal Atomic # 6 Polarization: 1.87 SS G_CDS: -4.63 Total: -2.76 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: -0.34 Total: 0.01 kcal Atomic # 8 Polarization: -3.18 SS G_CDS: -0.37 Total: -3.54 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.54 Total: -6.58 kcal Atomic # 16 Polarization: -0.36 SS G_CDS: -2.26 Total: -2.62 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -7.66 -13.66 -21.33 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12130084_6739946.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.106 kcal (2) G-P(sol) polarization free energy of solvation -7.663 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.443 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.663 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.326 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.780 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds