Wall clock time and date at job start Thu Mar 4 2021 13:18:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42903 * 109.47084 * 2 1 4 4 C 1.35902 * 117.00133 * 84.82335 * 3 2 1 5 5 C 1.38725 * 120.05262 * 354.62668 * 4 3 2 6 6 C 1.38150 * 119.94065 * 180.02562 * 5 4 3 7 7 C 1.38261 * 120.05498 * 0.27985 * 6 5 4 8 8 C 1.50703 * 119.94555 * 179.70287 * 7 6 5 9 9 O 1.42900 * 109.47208 * 64.99244 * 8 7 6 10 10 Si 1.86299 * 109.47330 * 184.99600 * 8 7 6 11 11 C 1.38267 * 120.11172 * 359.44123 * 7 6 5 12 12 C 1.38144 * 120.05466 * 0.55883 * 11 7 6 13 13 C 1.50696 * 109.47175 * 239.99936 * 2 1 3 14 14 O 1.21285 * 119.99848 * 120.00042 * 13 2 1 15 15 N 1.34780 * 120.00254 * 299.99754 * 13 2 1 16 16 C 1.46495 * 120.00191 * 179.97438 * 15 13 2 17 17 H 1.09001 * 112.84894 * 23.80595 * 16 15 13 18 18 C 1.53783 * 113.61498 * 155.00114 * 16 15 13 19 19 C 1.53777 * 87.08121 * 139.97871 * 18 16 15 20 20 H 1.08999 * 113.61754 * 220.01428 * 19 18 16 21 21 C 1.50709 * 113.61080 * 89.20296 * 19 18 16 22 22 N 1.34770 * 119.99968 * 179.97438 * 21 19 18 23 23 O 1.21275 * 119.99770 * 359.97438 * 21 19 18 24 24 C 1.53775 * 87.08206 * 334.56951 * 19 18 16 25 25 H 1.09005 * 109.46870 * 300.00178 * 1 2 3 26 26 H 1.09004 * 109.47006 * 60.00208 * 1 2 3 27 27 H 1.09001 * 109.47123 * 179.97438 * 1 2 3 28 28 H 1.08993 * 109.47421 * 119.99572 * 2 1 3 29 29 H 1.08000 * 120.03612 * 0.04074 * 5 4 3 30 30 H 1.08006 * 119.97022 * 179.97438 * 6 5 4 31 31 H 1.09006 * 109.46489 * 304.99558 * 8 7 6 32 32 H 0.96697 * 113.99779 * 180.02562 * 9 8 7 33 33 H 1.48492 * 109.99926 * 300.00046 * 10 8 7 34 34 H 1.48499 * 109.99758 * 61.31949 * 10 8 7 35 35 H 1.08000 * 119.97141 * 180.25402 * 11 7 6 36 36 H 1.07997 * 120.02611 * 179.74931 * 12 11 7 37 37 H 0.96998 * 119.99518 * 0.02562 * 15 13 2 38 38 H 1.08999 * 113.61661 * 254.53543 * 18 16 15 39 39 H 1.09008 * 113.61165 * 25.34645 * 18 16 15 40 40 H 0.97005 * 119.99935 * 359.97438 * 22 21 19 41 41 H 0.97001 * 120.00127 * 180.02562 * 22 21 19 42 42 H 1.08992 * 113.61684 * 270.87750 * 24 19 18 43 43 H 1.09009 * 113.61251 * 139.97709 * 24 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1090 1.9654 1.2059 5 6 1.6547 1.3308 2.3528 6 6 1.7597 1.9616 3.5774 7 6 2.3117 3.2265 3.6598 8 6 2.4189 3.9150 4.9961 9 8 3.3185 3.1883 5.8355 10 14 3.0592 5.6475 4.7525 11 6 2.7705 3.8587 2.5189 12 6 2.6678 3.2323 1.2920 13 6 2.0323 -0.7104 -1.2304 14 8 2.7296 -0.1210 -2.0288 15 7 1.7068 -2.0008 -1.4437 16 6 2.1947 -2.6912 -2.6401 17 1 3.0998 -2.2418 -3.0486 18 6 2.2845 -4.2177 -2.4769 19 6 1.7496 -4.3240 -3.9147 20 1 1.0274 -5.1285 -4.0537 21 6 2.8323 -4.3221 -4.9632 22 7 2.5069 -4.4105 -6.2680 23 8 3.9963 -4.2411 -4.6326 24 6 1.1026 -2.9469 -3.6922 25 1 -0.3633 0.5139 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 1.8934 -0.5137 0.8899 29 1 1.2195 0.3445 2.2885 30 1 1.4057 1.4681 4.4706 31 1 1.4355 3.9536 5.4647 32 1 3.4358 3.5750 6.7140 33 1 4.3994 5.6085 4.1141 34 1 2.1164 6.4232 3.9073 35 1 3.2051 4.8452 2.5864 36 1 3.0226 3.7282 0.4006 37 1 1.1489 -2.4721 -0.8054 38 1 3.3041 -4.5853 -2.3619 39 1 1.6033 -4.6173 -1.7255 40 1 1.5758 -4.4757 -6.5323 41 1 3.2037 -4.4097 -6.9428 42 1 0.0974 -2.9991 -3.2743 43 1 1.1683 -2.2885 -4.5585 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_10157680.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:18:23 Heat of formation + Delta-G solvation = -90.229809 kcal Electronic energy + Delta-G solvation = -26435.765304 eV Core-core repulsion = 22448.643780 eV Total energy + Delta-G solvation = -3987.121524 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.145 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -42.05087 -41.53522 -40.50052 -39.15360 -38.30521 -37.22363 -35.03533 -34.63040 -33.06590 -32.23531 -31.53626 -27.38515 -26.77314 -26.64253 -25.29409 -24.29968 -22.95576 -22.33827 -21.54470 -20.37222 -19.62126 -18.70440 -18.32212 -18.15270 -18.06086 -17.30981 -16.94495 -16.93523 -16.81174 -16.21281 -15.93847 -15.88766 -15.53834 -15.36447 -15.04027 -14.63359 -14.39925 -14.33266 -13.96942 -13.90948 -13.80377 -13.52475 -13.34745 -13.28838 -13.06261 -12.95004 -12.47439 -12.19976 -11.98702 -11.91687 -11.88781 -11.70437 -11.05857 -10.95772 -10.72286 -10.28506 -10.21942 -10.21061 -9.34792 -4.96831 0.06691 0.17464 1.30940 1.31563 1.42302 1.51934 1.62380 1.97483 2.40485 2.48379 2.52328 3.33483 3.37085 3.42144 3.43319 3.58470 3.67055 3.70151 3.71153 3.79723 3.86485 3.91752 4.12675 4.16280 4.24582 4.41947 4.49397 4.50647 4.60528 4.63162 4.67331 4.77380 4.82197 4.83167 4.96561 4.99997 5.03441 5.08962 5.13665 5.33477 5.40842 5.52578 5.81842 6.15128 6.39015 6.41313 6.93494 7.04990 7.28776 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C 0.062 3.938 3 O -0.314 6.314 4 C 0.123 3.877 5 C -0.202 4.202 6 C -0.050 4.050 7 C -0.130 4.130 8 C -0.067 4.067 9 O -0.564 6.564 10 Si 0.765 3.235 11 C -0.099 4.099 12 C -0.165 4.165 13 C 0.514 3.486 14 O -0.576 6.576 15 N -0.691 5.691 16 C 0.108 3.892 17 H 0.071 0.929 18 C -0.118 4.118 19 C -0.130 4.130 20 H 0.151 0.849 21 C 0.520 3.480 22 N -0.837 5.837 23 O -0.596 6.596 24 C -0.121 4.121 25 H 0.086 0.914 26 H 0.061 0.939 27 H 0.117 0.883 28 H 0.127 0.873 29 H 0.166 0.834 30 H 0.156 0.844 31 H 0.101 0.899 32 H 0.403 0.597 33 H -0.303 1.303 34 H -0.291 1.291 35 H 0.120 0.880 36 H 0.128 0.872 37 H 0.424 0.576 38 H 0.064 0.936 39 H 0.136 0.864 40 H 0.420 0.580 41 H 0.405 0.595 42 H 0.133 0.867 43 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.855 -5.030 5.298 13.084 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C 0.003 3.997 3 O -0.228 6.228 4 C 0.077 3.923 5 C -0.220 4.220 6 C -0.068 4.068 7 C -0.130 4.130 8 C -0.177 4.177 9 O -0.374 6.374 10 Si 0.673 3.327 11 C -0.117 4.117 12 C -0.184 4.184 13 C 0.299 3.701 14 O -0.455 6.455 15 N -0.345 5.345 16 C 0.003 3.997 17 H 0.089 0.911 18 C -0.156 4.156 19 C -0.152 4.152 20 H 0.169 0.831 21 C 0.305 3.695 22 N -0.400 5.400 23 O -0.477 6.477 24 C -0.159 4.159 25 H 0.105 0.895 26 H 0.080 0.920 27 H 0.136 0.864 28 H 0.145 0.855 29 H 0.183 0.817 30 H 0.173 0.827 31 H 0.118 0.882 32 H 0.255 0.745 33 H -0.232 1.232 34 H -0.219 1.219 35 H 0.137 0.863 36 H 0.146 0.854 37 H 0.263 0.737 38 H 0.083 0.917 39 H 0.154 0.846 40 H 0.251 0.749 41 H 0.236 0.764 42 H 0.152 0.848 43 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -9.363 -4.260 3.832 10.977 hybrid contribution 0.115 -0.298 -1.003 1.052 sum -9.248 -4.558 2.829 10.691 Atomic orbital electron populations 1.22391 0.89698 1.06189 1.04497 1.22513 0.97731 0.81800 0.97686 1.86186 1.81542 1.27328 1.27705 1.19152 0.95689 0.92693 0.84720 1.21644 1.05988 1.02816 0.91536 1.21120 0.94910 0.92855 0.97870 1.19660 1.02526 0.96920 0.93891 1.24633 0.98127 1.04973 0.90005 1.86443 1.65705 1.55003 1.30226 0.94631 0.75979 0.75191 0.86873 1.20805 0.99079 0.99245 0.92522 1.20464 1.04527 0.94770 0.98596 1.20670 0.79520 0.82953 0.86908 1.90761 1.39179 1.67172 1.48347 1.45653 1.53036 1.10204 1.25643 1.22623 0.97827 0.92994 0.86270 0.91090 1.23290 1.03344 0.92917 0.96059 1.22226 0.97275 1.01957 0.93709 0.83129 1.20765 0.89599 0.74085 0.85019 1.43761 1.13795 1.75635 1.06806 1.90763 1.22822 1.51678 1.82417 1.23424 1.00109 0.93690 0.98716 0.89498 0.92020 0.86417 0.85549 0.81681 0.82682 0.88166 0.74532 1.23176 1.21875 0.86301 0.85420 0.73661 0.91737 0.84566 0.74871 0.76438 0.84848 0.91668 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.04 9.07 71.98 0.65 1.70 16 2 C 0.06 0.06 2.65 29.85 0.08 0.14 16 3 O -0.31 -3.20 9.33 -73.41 -0.69 -3.89 16 4 C 0.12 1.01 6.60 22.50 0.15 1.16 16 5 C -0.20 -0.41 8.24 22.37 0.18 -0.23 16 6 C -0.05 -0.12 9.68 22.25 0.22 0.10 16 7 C -0.13 -0.72 5.38 -19.85 -0.11 -0.83 16 8 C -0.07 0.03 2.79 71.24 0.20 0.22 16 9 O -0.56 0.23 12.81 -148.98 -1.91 -1.68 16 10 Si 0.77 -0.27 29.85 68.60 2.05 1.78 16 11 C -0.10 -0.89 8.66 22.25 0.19 -0.70 16 12 C -0.16 -1.73 9.99 22.37 0.22 -1.51 16 13 C 0.51 3.27 7.23 87.66 0.63 3.90 16 14 O -0.58 -11.09 16.10 15.99 0.26 -10.83 16 15 N -0.69 1.68 5.25 -440.04 -2.31 -0.63 16 16 C 0.11 0.12 3.89 45.52 0.18 0.30 16 17 H 0.07 0.86 7.40 -2.39 -0.02 0.84 16 18 C -0.12 0.46 7.20 31.12 0.22 0.68 16 19 C -0.13 0.72 4.34 -11.01 -0.05 0.67 16 20 H 0.15 -1.94 8.14 -2.39 -0.02 -1.96 16 21 C 0.52 1.41 7.36 87.66 0.65 2.05 16 22 N -0.84 3.74 8.87 -173.54 -1.54 2.20 16 23 O -0.60 -8.53 16.59 -3.01 -0.05 -8.58 16 24 C -0.12 0.65 7.46 31.12 0.23 0.88 16 25 H 0.09 -0.61 6.90 -2.38 -0.02 -0.63 16 26 H 0.06 -0.13 8.14 -2.38 -0.02 -0.15 16 27 H 0.12 -1.64 7.56 -2.39 -0.02 -1.66 16 28 H 0.13 -0.59 6.32 -2.39 -0.02 -0.61 16 29 H 0.17 -0.89 5.43 -2.91 -0.02 -0.91 16 30 H 0.16 -0.41 8.06 -2.91 -0.02 -0.43 16 31 H 0.10 -0.56 7.96 -2.38 -0.02 -0.57 16 32 H 0.40 -4.44 8.74 -74.06 -0.65 -5.09 16 33 H -0.30 -2.50 7.04 99.48 0.70 -1.80 16 34 H -0.29 -1.60 7.11 99.48 0.71 -0.89 16 35 H 0.12 1.02 4.86 -2.91 -0.01 1.00 16 36 H 0.13 1.35 8.06 -2.91 -0.02 1.33 16 37 H 0.42 -5.01 8.14 -92.71 -0.76 -5.77 16 38 H 0.06 0.18 7.43 -2.39 -0.02 0.16 16 39 H 0.14 -1.62 8.12 -2.38 -0.02 -1.64 16 40 H 0.42 -4.90 8.83 -92.70 -0.82 -5.72 16 41 H 0.40 -1.70 8.93 -92.71 -0.83 -2.53 16 42 H 0.13 -1.57 8.14 -2.39 -0.02 -1.59 16 43 H 0.06 -0.13 8.10 -2.38 -0.02 -0.15 16 Total: 0.00 -39.40 358.75 -2.45 -41.86 By element: Atomic # 1 Polarization: -26.85 SS G_CDS: -1.92 Total: -28.77 kcal Atomic # 6 Polarization: 4.89 SS G_CDS: 3.65 Total: 8.54 kcal Atomic # 7 Polarization: 5.42 SS G_CDS: -3.85 Total: 1.57 kcal Atomic # 8 Polarization: -22.59 SS G_CDS: -2.39 Total: -24.98 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: 2.05 Total: 1.78 kcal Total: -39.40 -2.45 -41.86 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_10157680.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.374 kcal (2) G-P(sol) polarization free energy of solvation -39.403 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.776 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.454 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.856 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.230 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds