Wall clock time and date at job start Thu Mar 4 2021 13:18:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34771 * 1 3 3 O 1.21281 * 120.00495 * 2 1 4 4 C 1.50704 * 119.99702 * 180.02562 * 2 1 3 5 5 H 1.08996 * 112.85115 * 311.19107 * 4 2 1 6 6 C 1.53780 * 113.68958 * 82.46335 * 4 2 1 7 7 C 1.53786 * 87.08292 * 139.98855 * 6 4 2 8 8 H 1.08993 * 113.69429 * 220.00745 * 7 6 4 9 9 N 1.46506 * 113.61017 * 89.11397 * 7 6 4 10 10 C 1.34777 * 119.99873 * 107.50857 * 9 7 6 11 11 O 1.21695 * 119.99811 * 359.97438 * 10 9 7 12 12 C 1.46676 * 119.99963 * 179.97438 * 10 9 7 13 13 C 1.37866 * 126.23219 * 179.71167 * 12 10 9 14 14 C 1.39840 * 107.08758 * 179.84322 * 13 12 10 15 15 C 1.50692 * 126.07041 * 180.13774 * 14 13 12 16 16 O 1.42907 * 109.47305 * 300.30769 * 15 14 13 17 17 Si 1.86297 * 109.47210 * 180.30908 * 15 14 13 18 18 C 1.35455 * 107.85918 * 0.42229 * 14 13 12 19 19 N 1.35533 * 108.87424 * 359.73773 * 18 14 13 20 20 C 1.53780 * 87.07926 * 334.56872 * 7 6 4 21 21 H 0.97000 * 119.99924 * 180.02562 * 1 2 3 22 22 H 0.96995 * 119.99681 * 359.97438 * 1 2 3 23 23 H 1.09002 * 113.61686 * 25.44557 * 6 4 2 24 24 H 1.08998 * 113.61586 * 254.53739 * 6 4 2 25 25 H 0.96995 * 120.00050 * 287.22972 * 9 7 6 26 26 H 1.08006 * 126.45859 * 359.96631 * 13 12 10 27 27 H 1.09001 * 109.47286 * 60.30586 * 15 14 13 28 28 H 0.96698 * 114.00303 * 180.02562 * 16 15 14 29 29 H 1.48501 * 110.00059 * 59.99886 * 17 15 14 30 30 H 1.48498 * 110.00212 * 181.32121 * 17 15 14 31 31 H 1.08004 * 125.56136 * 179.77503 * 18 14 13 32 32 H 0.96996 * 125.67938 * 179.97438 * 19 18 14 33 33 H 1.09001 * 113.61558 * 139.98316 * 20 7 6 34 34 H 1.09003 * 113.61114 * 270.79751 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3052 -0.0006 5 1 1.7399 -2.0028 0.7549 6 6 2.2501 -1.9320 -1.3969 7 6 3.6826 -2.3128 -0.9870 8 1 4.4152 -2.1829 -1.7834 9 7 3.7780 -3.6207 -0.3340 10 6 4.3239 -4.6635 -0.9905 11 8 4.7371 -4.5187 -2.1260 12 6 4.4199 -5.9729 -0.3365 13 6 4.9463 -7.1221 -0.8870 14 6 4.8410 -8.1266 0.0801 15 6 5.2915 -9.5564 -0.0730 16 8 4.5960 -10.1607 -1.1653 17 14 4.9225 -10.4949 1.4935 18 6 4.2563 -7.5877 1.1768 19 7 3.9955 -6.2796 0.9365 20 6 3.6295 -1.1342 -0.0006 21 1 -0.4850 -0.8400 0.0004 22 1 -0.4849 0.8400 0.0004 23 1 2.2068 -1.2057 -2.2085 24 1 1.6000 -2.7913 -1.5614 25 1 3.4520 -3.7352 0.5724 26 1 5.3633 -7.2264 -1.8778 27 1 6.3638 -9.5807 -0.2671 28 1 4.8364 -11.0841 -1.3222 29 1 3.4636 -10.4693 1.7692 30 1 5.3910 -11.8984 1.3670 31 1 4.0348 -8.1144 2.0933 32 1 3.5787 -5.6624 1.5579 33 1 4.0930 -1.3494 0.9622 34 1 3.9645 -0.1900 -0.4300 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_10543058.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:18:26 Heat of formation + Delta-G solvation = -39.473503 kcal Electronic energy + Delta-G solvation = -19572.905661 eV Core-core repulsion = 16280.542754 eV Total energy + Delta-G solvation = -3292.362906 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.110 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -42.49504 -41.55248 -40.15118 -38.49983 -37.75401 -34.75168 -34.41285 -32.59112 -30.74956 -27.65620 -26.80173 -26.31449 -24.27694 -22.24923 -21.32430 -20.70000 -20.40306 -19.61647 -18.51054 -18.41741 -17.81512 -17.10717 -16.96052 -16.37564 -16.16662 -15.77744 -15.47223 -15.10773 -15.04312 -14.75170 -14.49782 -14.39508 -13.95653 -13.65952 -13.38146 -13.34076 -12.96617 -12.54071 -11.94776 -11.80662 -11.66294 -11.35577 -10.96357 -10.68826 -10.42731 -10.29552 -9.88329 -9.26965 -4.84081 0.35558 1.36745 1.55652 1.58297 1.71093 1.86860 2.06987 2.13373 2.23761 2.60479 3.32323 3.40156 3.54210 3.68431 3.81149 3.88729 4.09717 4.18780 4.23136 4.30178 4.52408 4.64541 4.68406 4.74456 4.80993 4.88372 4.91710 5.01724 5.04399 5.43168 5.59574 5.74177 5.85727 6.34362 6.44141 6.54180 6.70261 7.04317 7.31709 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.839 5.839 2 C 0.520 3.480 3 O -0.595 6.595 4 C -0.127 4.127 5 H 0.149 0.851 6 C -0.128 4.128 7 C 0.118 3.882 8 H 0.088 0.912 9 N -0.693 5.693 10 C 0.593 3.407 11 O -0.574 6.574 12 C -0.069 4.069 13 C -0.105 4.105 14 C -0.192 4.192 15 C -0.064 4.064 16 O -0.565 6.565 17 Si 0.788 3.212 18 C 0.061 3.939 19 N -0.513 5.513 20 C -0.119 4.119 21 H 0.418 0.582 22 H 0.404 0.596 23 H 0.088 0.912 24 H 0.091 0.909 25 H 0.414 0.586 26 H 0.123 0.877 27 H 0.078 0.922 28 H 0.391 0.609 29 H -0.286 1.286 30 H -0.298 1.298 31 H 0.215 0.785 32 H 0.439 0.561 33 H 0.096 0.904 34 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.472 -3.216 8.747 9.945 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.402 5.402 2 C 0.306 3.694 3 O -0.476 6.476 4 C -0.148 4.148 5 H 0.167 0.833 6 C -0.167 4.167 7 C 0.013 3.987 8 H 0.106 0.894 9 N -0.345 5.345 10 C 0.382 3.618 11 O -0.453 6.453 12 C -0.181 4.181 13 C -0.133 4.133 14 C -0.198 4.198 15 C -0.172 4.172 16 O -0.374 6.374 17 Si 0.692 3.308 18 C -0.078 4.078 19 N -0.110 5.110 20 C -0.157 4.157 21 H 0.249 0.751 22 H 0.235 0.765 23 H 0.106 0.894 24 H 0.110 0.890 25 H 0.252 0.748 26 H 0.141 0.859 27 H 0.096 0.904 28 H 0.240 0.760 29 H -0.213 1.213 30 H -0.226 1.226 31 H 0.232 0.768 32 H 0.281 0.719 33 H 0.115 0.885 34 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -3.420 -2.433 8.343 9.339 hybrid contribution -0.752 -0.424 -1.001 1.322 sum -4.172 -2.856 7.341 8.914 Atomic orbital electron populations 1.43834 1.06553 1.13733 1.76051 1.20895 0.83346 0.91212 0.73948 1.90754 1.69430 1.35473 1.51920 1.22897 0.96277 0.94675 1.00955 0.83312 1.23300 0.96967 1.01027 0.95391 1.21777 0.98178 0.82092 0.96690 0.89396 1.45292 1.62157 1.08517 1.18526 1.17202 0.76735 0.82931 0.84886 1.90859 1.50494 1.84201 1.19730 1.20030 1.14607 0.94885 0.88627 1.21231 1.01103 0.91456 0.99468 1.18979 1.10257 0.94751 0.95788 1.24546 0.98182 0.94231 1.00248 1.86570 1.68216 1.31223 1.51427 0.94348 0.79342 0.77711 0.79441 1.22286 1.00547 0.84104 1.00815 1.41783 1.46605 1.10642 1.12012 1.23167 0.94009 0.97789 1.00752 0.75089 0.76500 0.89368 0.89009 0.74849 0.85859 0.90427 0.75973 1.21256 1.22564 0.76848 0.71894 0.88516 0.89060 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.62 8.87 -173.53 -1.54 4.08 16 2 C 0.52 0.06 7.63 87.66 0.67 0.73 16 3 O -0.60 -6.58 16.74 -3.03 -0.05 -6.63 16 4 C -0.13 0.80 4.02 -11.01 -0.04 0.76 16 5 H 0.15 -2.04 8.14 -2.39 -0.02 -2.06 16 6 C -0.13 0.52 7.43 31.12 0.23 0.75 16 7 C 0.12 -0.18 4.33 45.52 0.20 0.01 16 8 H 0.09 0.38 7.46 -2.39 -0.02 0.36 16 9 N -0.69 2.73 5.26 -443.99 -2.33 0.39 16 10 C 0.59 2.91 7.79 86.45 0.67 3.59 16 11 O -0.57 -8.72 16.48 -4.33 -0.07 -8.79 16 12 C -0.07 -0.16 7.06 40.35 0.28 0.13 16 13 C -0.11 -0.74 10.59 22.57 0.24 -0.50 16 14 C -0.19 -0.33 5.47 -20.12 -0.11 -0.44 16 15 C -0.06 0.01 3.01 71.23 0.21 0.22 16 16 O -0.56 -2.40 12.86 -148.98 -1.92 -4.31 16 17 Si 0.79 -3.99 30.59 68.60 2.10 -1.89 16 18 C 0.06 -0.35 10.45 83.48 0.87 0.53 16 19 N -0.51 3.63 5.99 -183.62 -1.10 2.52 16 20 C -0.12 0.38 7.15 31.12 0.22 0.61 16 21 H 0.42 -5.53 8.83 -92.71 -0.82 -6.35 16 22 H 0.40 -2.67 8.93 -92.71 -0.83 -3.49 16 23 H 0.09 -0.13 8.10 -2.39 -0.02 -0.15 16 24 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 25 H 0.41 -5.01 7.83 -92.71 -0.73 -5.74 16 26 H 0.12 1.38 8.06 -2.91 -0.02 1.36 16 27 H 0.08 -0.15 7.96 -2.39 -0.02 -0.17 16 28 H 0.39 -1.50 8.74 -74.06 -0.65 -2.15 16 29 H -0.29 -0.04 7.11 99.48 0.71 0.67 16 30 H -0.30 -0.24 7.11 99.48 0.71 0.46 16 31 H 0.22 -2.94 6.19 -2.91 -0.02 -2.95 16 32 H 0.44 -6.97 8.19 -92.71 -0.76 -7.73 16 33 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 34 H 0.09 0.18 7.44 -2.39 -0.02 0.16 16 Total: 0.00 -33.21 298.07 -4.00 -37.21 By element: Atomic # 1 Polarization: -26.43 SS G_CDS: -2.54 Total: -28.97 kcal Atomic # 6 Polarization: 2.93 SS G_CDS: 3.45 Total: 6.38 kcal Atomic # 7 Polarization: 11.98 SS G_CDS: -4.98 Total: 7.00 kcal Atomic # 8 Polarization: -17.70 SS G_CDS: -2.04 Total: -19.73 kcal Atomic # 14 Polarization: -3.99 SS G_CDS: 2.10 Total: -1.89 kcal Total: -33.21 -4.00 -37.21 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_10543058.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.261 kcal (2) G-P(sol) polarization free energy of solvation -33.208 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.469 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.005 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.212 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.474 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds