Wall clock time and date at job start Thu Mar 4 2021 13:18:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.35533 * 125.67791 * 2 1 4 4 C 1.35458 * 108.87018 * 179.97438 * 3 2 1 5 5 C 1.50700 * 126.06231 * 179.97438 * 4 3 2 6 6 O 1.42903 * 109.47169 * 245.02387 * 5 4 3 7 7 Si 1.86294 * 109.47496 * 5.02936 * 5 4 3 8 8 C 1.39836 * 107.86602 * 359.74317 * 4 3 2 9 9 C 1.37654 * 125.68157 * 179.97438 * 2 1 3 10 10 C 1.46684 * 126.22742 * 0.02562 * 9 2 1 11 11 O 1.21694 * 120.00273 * 4.98444 * 10 9 2 12 12 N 1.34777 * 119.99703 * 184.98595 * 10 9 2 13 13 C 1.46496 * 119.99815 * 174.28477 * 12 10 9 14 14 H 1.08997 * 112.85011 * 23.80274 * 13 12 10 15 15 C 1.53790 * 113.61296 * 154.99759 * 13 12 10 16 16 C 1.53777 * 87.07933 * 89.11680 * 15 13 12 17 17 H 1.09008 * 113.61154 * 270.79852 * 16 15 13 18 18 C 1.50701 * 113.61657 * 139.98195 * 16 15 13 19 19 N 1.34776 * 120.00276 * 179.97438 * 18 16 15 20 20 O 1.21274 * 119.99699 * 359.97438 * 18 16 15 21 21 C 1.53776 * 87.08652 * 25.43059 * 16 15 13 22 22 H 1.09000 * 109.47130 * 264.32320 * 1 2 3 23 23 H 1.08993 * 109.47092 * 24.32280 * 1 2 3 24 24 H 1.09003 * 109.47187 * 144.32652 * 1 2 3 25 25 H 1.08000 * 125.56460 * 0.02562 * 3 2 1 26 26 H 1.09000 * 109.46976 * 125.03118 * 5 4 3 27 27 H 0.96700 * 113.99691 * 180.02562 * 6 5 4 28 28 H 1.48502 * 109.99955 * 299.99721 * 7 5 4 29 29 H 1.48498 * 110.00107 * 61.31857 * 7 5 4 30 30 H 1.07997 * 126.45408 * 180.26174 * 8 4 3 31 31 H 0.97005 * 119.99643 * 354.27600 * 12 10 9 32 32 H 1.08995 * 113.61267 * 334.56470 * 15 13 12 33 33 H 1.08998 * 113.68920 * 203.67289 * 15 13 12 34 34 H 0.96996 * 120.00286 * 180.02562 * 19 18 16 35 35 H 0.97003 * 119.99501 * 359.72621 * 19 18 16 36 36 H 1.08999 * 113.61434 * 89.11487 * 21 16 15 37 37 H 1.09004 * 113.62182 * 220.02367 * 21 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5522 0.7093 0.0006 5 6 4.7536 1.6189 0.0002 6 8 5.4771 1.4521 -1.2208 7 14 4.1927 3.3888 0.1529 8 6 3.5780 -0.6888 0.0069 9 6 2.2679 -1.1181 0.0005 10 6 1.8124 -2.5125 0.0006 11 8 0.6255 -2.7649 -0.0914 12 7 2.7085 -3.5140 0.1026 13 6 2.2478 -4.8989 0.2288 14 1 1.2458 -5.0500 -0.1729 15 6 3.2715 -5.9359 -0.2630 16 6 3.8384 -5.9381 1.1664 17 1 4.6170 -5.1926 1.3284 18 6 4.2280 -7.3079 1.6593 19 7 4.7404 -7.4583 2.8968 20 8 4.0804 -8.2748 0.9424 21 6 2.4449 -5.4879 1.6357 22 1 -0.3633 -0.1017 1.0226 23 1 -0.3633 0.9364 -0.4232 24 1 -0.3634 -0.8348 -0.5993 25 1 1.9082 2.1236 0.0004 26 1 5.3992 1.3685 0.8421 27 1 6.2653 2.0079 -1.2900 28 1 3.3118 3.7427 -0.9891 29 1 3.4666 3.5829 1.4336 30 1 4.4584 -1.3144 0.0129 31 1 3.6584 -3.3178 0.0922 32 1 3.9653 -5.5454 -1.0074 33 1 2.8256 -6.8860 -0.5573 34 1 4.9915 -8.3399 3.2139 35 1 4.8621 -6.6843 3.4686 36 1 1.7717 -6.3150 1.8609 37 1 2.4714 -4.7356 2.4240 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_10803934.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:18:29 Heat of formation + Delta-G solvation = -24.530139 kcal Electronic energy + Delta-G solvation = -21695.245937 eV Core-core repulsion = 18247.993405 eV Total energy + Delta-G solvation = -3447.252532 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.126 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.61400 -41.57027 -40.03172 -38.41274 -37.64280 -34.80284 -34.57209 -33.75163 -30.97355 -28.48830 -27.39848 -26.86669 -25.68642 -24.06473 -22.21086 -21.24765 -20.63264 -20.15973 -18.83752 -18.41682 -18.29907 -17.82531 -17.09724 -16.97198 -16.69006 -16.14643 -15.71366 -15.51850 -15.29414 -15.23321 -14.98571 -14.58181 -14.31842 -14.11611 -13.70207 -13.67907 -13.43918 -13.26730 -13.19258 -12.90625 -12.43610 -11.93863 -11.86541 -11.70860 -11.07191 -10.87019 -10.70531 -10.26978 -10.18722 -9.72450 -9.30862 -5.01975 0.38429 1.29665 1.42313 1.49007 1.59609 1.66936 1.97832 2.20559 2.30121 2.51648 3.26867 3.34151 3.50378 3.58813 3.70479 3.76506 3.79128 3.86408 4.05404 4.08197 4.22712 4.31472 4.46938 4.53976 4.59007 4.61099 4.71390 4.72075 4.73853 4.82008 4.99440 5.12605 5.43225 5.61137 5.75976 5.84897 6.04272 6.29776 6.38278 6.70281 7.10861 7.25234 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.403 5.403 3 C 0.022 3.978 4 C -0.162 4.162 5 C -0.033 4.033 6 O -0.548 6.548 7 Si 0.682 3.318 8 C -0.109 4.109 9 C -0.053 4.053 10 C 0.597 3.403 11 O -0.543 6.543 12 N -0.702 5.702 13 C 0.122 3.878 14 H 0.113 0.887 15 C -0.122 4.122 16 C -0.142 4.142 17 H 0.114 0.886 18 C 0.526 3.474 19 N -0.855 5.855 20 O -0.540 6.540 21 C -0.133 4.133 22 H 0.080 0.920 23 H 0.085 0.915 24 H 0.105 0.895 25 H 0.165 0.835 26 H 0.070 0.930 27 H 0.379 0.621 28 H -0.254 1.254 29 H -0.257 1.257 30 H 0.148 0.852 31 H 0.404 0.596 32 H 0.082 0.918 33 H 0.112 0.888 34 H 0.402 0.598 35 H 0.402 0.598 36 H 0.098 0.902 37 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.402 4.905 4.044 7.733 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.075 5.075 3 C -0.115 4.115 4 C -0.168 4.168 5 C -0.145 4.145 6 O -0.353 6.353 7 Si 0.583 3.417 8 C -0.135 4.135 9 C -0.167 4.167 10 C 0.385 3.615 11 O -0.421 6.421 12 N -0.354 5.354 13 C 0.017 3.983 14 H 0.131 0.869 15 C -0.160 4.160 16 C -0.164 4.164 17 H 0.132 0.868 18 C 0.311 3.689 19 N -0.418 5.418 20 O -0.416 6.416 21 C -0.172 4.172 22 H 0.098 0.902 23 H 0.104 0.896 24 H 0.123 0.877 25 H 0.182 0.818 26 H 0.088 0.912 27 H 0.227 0.773 28 H -0.178 1.178 29 H -0.182 1.182 30 H 0.165 0.835 31 H 0.240 0.760 32 H 0.101 0.899 33 H 0.131 0.869 34 H 0.233 0.767 35 H 0.230 0.770 36 H 0.117 0.883 37 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 1.770 4.294 3.355 5.729 hybrid contribution 0.637 -0.292 0.680 0.976 sum 2.407 4.002 4.034 6.171 Atomic orbital electron populations 1.22350 0.75361 1.05283 1.04600 1.43767 1.07070 1.04577 1.52057 1.21702 0.90319 0.91434 1.08044 1.18693 0.92082 0.93921 1.12129 1.23930 0.93544 1.07692 0.89328 1.86515 1.43121 1.68266 1.37430 0.95268 0.87184 0.79013 0.80242 1.21167 0.94318 0.94364 1.03651 1.19982 0.90229 0.87526 1.18918 1.16906 0.85540 0.83379 0.75676 1.90813 1.16286 1.84733 1.50267 1.45272 1.09742 1.05430 1.74911 1.21836 1.00225 0.79896 0.96348 0.86913 1.23253 0.97862 1.00172 0.94729 1.22871 0.99083 0.95070 0.99337 0.86759 1.20449 0.75970 0.91060 0.81414 1.43913 1.67197 1.13664 1.17019 1.90767 1.53661 1.41378 1.55815 1.23375 0.94521 1.01253 0.98089 0.90159 0.89590 0.87669 0.81800 0.91163 0.77348 1.17796 1.18153 0.83478 0.76008 0.89929 0.86943 0.76731 0.76974 0.88325 0.89999 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.03 10.48 59.85 0.63 0.65 16 2 N -0.40 -0.99 3.16 -120.24 -0.38 -1.37 16 3 C 0.02 0.05 9.92 -16.91 -0.17 -0.12 16 4 C -0.16 -0.32 5.46 -105.02 -0.57 -0.90 16 5 C -0.03 0.02 3.01 36.01 0.11 0.12 16 6 O -0.55 0.02 12.86 -35.23 -0.45 -0.44 16 7 Si 0.68 -1.09 30.60 -169.99 -5.20 -6.30 16 8 C -0.11 -0.16 10.29 -39.12 -0.40 -0.57 16 9 C -0.05 -0.14 6.89 -81.98 -0.56 -0.70 16 10 C 0.60 1.60 7.77 -12.85 -0.10 1.51 16 11 O -0.54 -3.00 14.36 5.19 0.07 -2.93 16 12 N -0.70 0.32 5.25 -54.32 -0.28 0.04 16 13 C 0.12 -0.06 4.36 -67.11 -0.29 -0.35 16 14 H 0.11 0.14 7.41 -51.93 -0.38 -0.24 16 15 C -0.12 0.10 7.15 -25.92 -0.19 -0.08 16 16 C -0.14 0.27 4.02 -90.96 -0.37 -0.09 16 17 H 0.11 -0.48 8.14 -51.92 -0.42 -0.90 16 18 C 0.53 0.34 7.63 -10.98 -0.08 0.26 16 19 N -0.85 2.14 8.87 31.22 0.28 2.42 16 20 O -0.54 -2.92 16.73 5.56 0.09 -2.83 16 21 C -0.13 0.22 7.43 -25.92 -0.19 0.03 16 22 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 23 H 0.09 -0.15 8.12 -51.93 -0.42 -0.57 16 24 H 0.10 0.18 6.55 -51.93 -0.34 -0.16 16 25 H 0.16 0.08 6.21 -52.49 -0.33 -0.24 16 26 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 27 H 0.38 -1.92 8.74 45.56 0.40 -1.53 16 28 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 29 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 30 H 0.15 -0.15 7.45 -52.49 -0.39 -0.54 16 31 H 0.40 -1.12 7.60 -40.82 -0.31 -1.43 16 32 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 33 H 0.11 0.08 7.43 -51.93 -0.39 -0.31 16 34 H 0.40 -1.10 8.93 -40.82 -0.36 -1.46 16 35 H 0.40 -2.14 8.83 -40.82 -0.36 -2.50 16 36 H 0.10 -0.11 8.09 -51.93 -0.42 -0.53 16 37 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 LS Contribution 316.36 15.07 4.77 4.77 Total: 0.00 -11.32 316.36 -7.91 -19.23 By element: Atomic # 1 Polarization: -7.75 SS G_CDS: -4.61 Total: -12.36 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -2.19 Total: -0.24 kcal Atomic # 7 Polarization: 1.48 SS G_CDS: -0.39 Total: 1.09 kcal Atomic # 8 Polarization: -5.91 SS G_CDS: -0.29 Total: -6.19 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.20 Total: -6.30 kcal Total LS contribution 4.77 Total: 4.77 kcal Total: -11.32 -7.91 -19.23 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_10803934.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.303 kcal (2) G-P(sol) polarization free energy of solvation -11.318 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.621 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.909 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.227 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.530 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds