Wall clock time and date at job start Thu Mar 4 2021 13:18:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.35533 * 125.67791 * 2 1 4 4 C 1.35458 * 108.87018 * 179.97438 * 3 2 1 5 5 C 1.50700 * 126.06231 * 179.97438 * 4 3 2 6 6 O 1.42903 * 109.47169 * 245.02387 * 5 4 3 7 7 Si 1.86294 * 109.47496 * 5.02936 * 5 4 3 8 8 C 1.39836 * 107.86602 * 359.74317 * 4 3 2 9 9 C 1.37654 * 125.68157 * 179.97438 * 2 1 3 10 10 C 1.46684 * 126.22742 * 0.02562 * 9 2 1 11 11 O 1.21694 * 120.00273 * 4.98444 * 10 9 2 12 12 N 1.34777 * 119.99703 * 184.98595 * 10 9 2 13 13 C 1.46496 * 119.99815 * 174.28477 * 12 10 9 14 14 H 1.08997 * 112.85011 * 23.80274 * 13 12 10 15 15 C 1.53790 * 113.61296 * 154.99759 * 13 12 10 16 16 C 1.53777 * 87.07933 * 89.11680 * 15 13 12 17 17 H 1.09008 * 113.61154 * 270.79852 * 16 15 13 18 18 C 1.50701 * 113.61657 * 139.98195 * 16 15 13 19 19 N 1.34776 * 120.00276 * 179.97438 * 18 16 15 20 20 O 1.21274 * 119.99699 * 359.97438 * 18 16 15 21 21 C 1.53776 * 87.08652 * 25.43059 * 16 15 13 22 22 H 1.09000 * 109.47130 * 264.32320 * 1 2 3 23 23 H 1.08993 * 109.47092 * 24.32280 * 1 2 3 24 24 H 1.09003 * 109.47187 * 144.32652 * 1 2 3 25 25 H 1.08000 * 125.56460 * 0.02562 * 3 2 1 26 26 H 1.09000 * 109.46976 * 125.03118 * 5 4 3 27 27 H 0.96700 * 113.99691 * 180.02562 * 6 5 4 28 28 H 1.48502 * 109.99955 * 299.99721 * 7 5 4 29 29 H 1.48498 * 110.00107 * 61.31857 * 7 5 4 30 30 H 1.07997 * 126.45408 * 180.26174 * 8 4 3 31 31 H 0.97005 * 119.99643 * 354.27600 * 12 10 9 32 32 H 1.08995 * 113.61267 * 334.56470 * 15 13 12 33 33 H 1.08998 * 113.68920 * 203.67289 * 15 13 12 34 34 H 0.96996 * 120.00286 * 180.02562 * 19 18 16 35 35 H 0.97003 * 119.99501 * 359.72621 * 19 18 16 36 36 H 1.08999 * 113.61434 * 89.11487 * 21 16 15 37 37 H 1.09004 * 113.62182 * 220.02367 * 21 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1009 0.0000 4 6 3.5522 0.7093 0.0006 5 6 4.7536 1.6189 0.0002 6 8 5.4771 1.4521 -1.2208 7 14 4.1927 3.3888 0.1529 8 6 3.5780 -0.6888 0.0069 9 6 2.2679 -1.1181 0.0005 10 6 1.8124 -2.5125 0.0006 11 8 0.6255 -2.7649 -0.0914 12 7 2.7085 -3.5140 0.1026 13 6 2.2478 -4.8989 0.2288 14 1 1.2458 -5.0500 -0.1729 15 6 3.2715 -5.9359 -0.2630 16 6 3.8384 -5.9381 1.1664 17 1 4.6170 -5.1926 1.3284 18 6 4.2280 -7.3079 1.6593 19 7 4.7404 -7.4583 2.8968 20 8 4.0804 -8.2748 0.9424 21 6 2.4449 -5.4879 1.6357 22 1 -0.3633 -0.1017 1.0226 23 1 -0.3633 0.9364 -0.4232 24 1 -0.3634 -0.8348 -0.5993 25 1 1.9082 2.1236 0.0004 26 1 5.3992 1.3685 0.8421 27 1 6.2653 2.0079 -1.2900 28 1 3.3118 3.7427 -0.9891 29 1 3.4666 3.5829 1.4336 30 1 4.4584 -1.3144 0.0129 31 1 3.6584 -3.3178 0.0922 32 1 3.9653 -5.5454 -1.0074 33 1 2.8256 -6.8860 -0.5573 34 1 4.9915 -8.3399 3.2139 35 1 4.8621 -6.6843 3.4686 36 1 1.7717 -6.3150 1.8609 37 1 2.4714 -4.7356 2.4240 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_10803934.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:18:28 Heat of formation + Delta-G solvation = -31.268930 kcal Electronic energy + Delta-G solvation = -21695.538153 eV Core-core repulsion = 18247.993405 eV Total energy + Delta-G solvation = -3447.544748 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.126 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.69733 -41.58312 -40.16565 -38.50122 -37.57006 -34.88194 -34.56884 -33.81177 -31.03469 -28.50593 -27.38502 -26.79650 -25.69160 -24.14405 -22.22901 -21.31552 -20.70050 -20.14584 -18.87508 -18.38309 -18.20831 -17.79926 -17.19560 -16.96829 -16.79432 -16.17585 -15.74982 -15.55271 -15.35684 -15.26267 -14.96953 -14.60949 -14.40176 -14.14933 -13.70563 -13.69393 -13.41353 -13.30814 -13.21001 -12.93992 -12.44306 -11.94403 -11.79916 -11.65925 -11.26928 -10.95351 -10.67604 -10.27708 -10.17869 -9.78229 -9.40807 -4.90092 0.25893 1.32844 1.42184 1.45278 1.57229 1.74141 2.05869 2.16226 2.16937 2.61699 3.33198 3.40295 3.53444 3.61683 3.72200 3.72712 3.90135 3.94945 4.04941 4.21267 4.25275 4.33421 4.52041 4.56005 4.60317 4.68108 4.72488 4.73372 4.83013 4.90271 5.02213 5.07782 5.42253 5.55706 5.77652 5.87137 5.96720 6.36734 6.45441 7.01883 7.05873 7.32978 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.414 5.414 3 C 0.008 3.992 4 C -0.181 4.181 5 C -0.039 4.039 6 O -0.567 6.567 7 Si 0.771 3.229 8 C -0.105 4.105 9 C -0.073 4.073 10 C 0.593 3.407 11 O -0.580 6.580 12 N -0.684 5.684 13 C 0.120 3.880 14 H 0.090 0.910 15 C -0.121 4.121 16 C -0.128 4.128 17 H 0.147 0.853 18 C 0.521 3.479 19 N -0.838 5.838 20 O -0.595 6.595 21 C -0.124 4.124 22 H 0.085 0.915 23 H 0.105 0.895 24 H 0.089 0.911 25 H 0.172 0.828 26 H 0.093 0.907 27 H 0.401 0.599 28 H -0.300 1.300 29 H -0.290 1.290 30 H 0.172 0.828 31 H 0.418 0.582 32 H 0.092 0.908 33 H 0.093 0.907 34 H 0.404 0.596 35 H 0.418 0.582 36 H 0.091 0.909 37 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.258 5.791 4.937 9.852 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.086 5.086 3 C -0.128 4.128 4 C -0.187 4.187 5 C -0.150 4.150 6 O -0.377 6.377 7 Si 0.677 3.323 8 C -0.131 4.131 9 C -0.186 4.186 10 C 0.382 3.618 11 O -0.461 6.461 12 N -0.336 5.336 13 C 0.015 3.985 14 H 0.109 0.891 15 C -0.160 4.160 16 C -0.149 4.149 17 H 0.165 0.835 18 C 0.307 3.693 19 N -0.401 5.401 20 O -0.476 6.476 21 C -0.163 4.163 22 H 0.103 0.897 23 H 0.124 0.876 24 H 0.107 0.893 25 H 0.189 0.811 26 H 0.111 0.889 27 H 0.251 0.749 28 H -0.228 1.228 29 H -0.217 1.217 30 H 0.190 0.810 31 H 0.256 0.744 32 H 0.111 0.889 33 H 0.111 0.889 34 H 0.235 0.765 35 H 0.249 0.751 36 H 0.109 0.891 37 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 3.708 5.191 4.295 7.690 hybrid contribution 0.047 -0.546 0.406 0.682 sum 3.755 4.644 4.701 7.600 Atomic orbital electron populations 1.22397 0.74837 1.05654 1.04773 1.43978 1.07670 1.04757 1.52162 1.21999 0.90808 0.91800 1.08216 1.19169 0.92876 0.94743 1.11939 1.24075 0.93293 1.07626 0.90027 1.86457 1.44394 1.69247 1.37580 0.94319 0.85159 0.76939 0.75860 1.21506 0.94569 0.94575 1.02419 1.20153 0.90941 0.87477 1.20051 1.17061 0.85338 0.83982 0.75369 1.90794 1.17850 1.85230 1.52267 1.45116 1.10091 1.04764 1.73605 1.21781 0.99365 0.79944 0.97417 0.89148 1.23178 0.97868 0.99006 0.95928 1.22893 0.99612 0.94408 0.98014 0.83495 1.20867 0.75421 0.91282 0.81739 1.43823 1.65476 1.14621 1.16191 1.90748 1.56207 1.43170 1.57486 1.23291 0.94522 1.01051 0.97473 0.89685 0.87617 0.89276 0.81098 0.88948 0.74868 1.22817 1.21701 0.81032 0.74352 0.88936 0.88896 0.76474 0.75051 0.89096 0.88814 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.13 10.48 127.77 1.34 1.47 16 2 N -0.41 -2.34 3.16 -534.31 -1.69 -4.03 16 3 C 0.01 0.04 9.92 83.48 0.83 0.87 16 4 C -0.18 -0.61 5.46 -20.12 -0.11 -0.72 16 5 C -0.04 0.09 3.01 71.24 0.21 0.31 16 6 O -0.57 0.94 12.86 -148.98 -1.92 -0.98 16 7 Si 0.77 -2.86 30.60 68.60 2.10 -0.76 16 8 C -0.10 -0.22 10.29 22.57 0.23 0.01 16 9 C -0.07 -0.40 6.89 40.35 0.28 -0.12 16 10 C 0.59 3.62 7.77 86.45 0.67 4.29 16 11 O -0.58 -7.49 14.36 -4.33 -0.06 -7.55 16 12 N -0.68 0.81 5.25 -443.98 -2.33 -1.52 16 13 C 0.12 -0.05 4.36 45.52 0.20 0.15 16 14 H 0.09 0.41 7.41 -2.39 -0.02 0.39 16 15 C -0.12 0.17 7.15 31.12 0.22 0.39 16 16 C -0.13 0.62 4.02 -11.02 -0.04 0.57 16 17 H 0.15 -1.66 8.14 -2.38 -0.02 -1.67 16 18 C 0.52 0.57 7.63 87.66 0.67 1.24 16 19 N -0.84 5.02 8.87 -173.54 -1.54 3.48 16 20 O -0.60 -7.12 16.73 -3.01 -0.05 -7.17 16 21 C -0.12 0.45 7.43 31.12 0.23 0.68 16 22 H 0.08 0.06 8.14 -2.39 -0.02 0.04 16 23 H 0.11 -0.29 8.12 -2.39 -0.02 -0.31 16 24 H 0.09 0.50 6.55 -2.39 -0.02 0.48 16 25 H 0.17 0.30 6.21 -2.91 -0.02 0.28 16 26 H 0.09 -0.62 7.96 -2.39 -0.02 -0.64 16 27 H 0.40 -4.85 8.74 -74.06 -0.65 -5.50 16 28 H -0.30 -1.20 7.11 99.48 0.71 -0.49 16 29 H -0.29 -0.47 7.11 99.48 0.71 0.24 16 30 H 0.17 -0.72 7.45 -2.91 -0.02 -0.74 16 31 H 0.42 -2.94 7.60 -92.70 -0.70 -3.64 16 32 H 0.09 -0.32 8.14 -2.39 -0.02 -0.34 16 33 H 0.09 0.30 7.43 -2.39 -0.02 0.28 16 34 H 0.40 -2.45 8.93 -92.71 -0.83 -3.28 16 35 H 0.42 -5.25 8.83 -92.71 -0.82 -6.07 16 36 H 0.09 -0.15 8.09 -2.39 -0.02 -0.17 16 37 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 Total: 0.00 -28.50 316.36 -2.57 -31.07 By element: Atomic # 1 Polarization: -19.87 SS G_CDS: -1.81 Total: -21.68 kcal Atomic # 6 Polarization: 4.41 SS G_CDS: 4.73 Total: 9.14 kcal Atomic # 7 Polarization: 3.49 SS G_CDS: -5.56 Total: -2.07 kcal Atomic # 8 Polarization: -13.67 SS G_CDS: -2.03 Total: -15.70 kcal Atomic # 14 Polarization: -2.86 SS G_CDS: 2.10 Total: -0.76 kcal Total: -28.50 -2.57 -31.07 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_10803934.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.200 kcal (2) G-P(sol) polarization free energy of solvation -28.502 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.702 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.567 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.069 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.269 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds