Wall clock time and date at job start Thu Mar 4 2021 13:18:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37651 * 125.67495 * 2 1 4 4 C 1.46667 * 126.23686 * 359.97438 * 3 2 1 5 5 O 1.21697 * 120.00025 * 4.36757 * 4 3 2 6 6 N 1.34775 * 120.00158 * 184.36587 * 4 3 2 7 7 C 1.46505 * 120.00095 * 174.62623 * 6 4 3 8 8 H 1.08998 * 112.90912 * 23.75180 * 7 6 4 9 9 C 1.53782 * 113.61443 * 155.00210 * 7 6 4 10 10 C 1.53782 * 87.17071 * 139.93927 * 9 7 6 11 11 H 1.09010 * 113.60998 * 220.05913 * 10 9 7 12 12 C 1.50699 * 113.61458 * 89.16036 * 10 9 7 13 13 N 1.34780 * 119.99703 * 179.97438 * 12 10 9 14 14 O 1.21275 * 120.00136 * 359.97438 * 12 10 9 15 15 C 1.53787 * 113.61338 * 252.49863 * 7 6 4 16 16 C 1.37879 * 107.52720 * 179.73519 * 3 2 1 17 17 C 1.39831 * 107.08679 * 0.22590 * 16 3 2 18 18 C 1.35448 * 107.86675 * 359.97438 * 17 16 3 19 19 C 1.50702 * 125.56571 * 179.97438 * 18 17 16 20 20 O 1.42902 * 109.47351 * 210.02287 * 19 18 17 21 21 Si 1.86301 * 109.46914 * 330.02471 * 19 18 17 22 22 H 1.09002 * 109.47115 * 91.93336 * 1 2 3 23 23 H 1.08998 * 109.47377 * 211.92937 * 1 2 3 24 24 H 1.08998 * 109.47363 * 331.93517 * 1 2 3 25 25 H 0.96999 * 120.00355 * 354.62535 * 6 4 3 26 26 H 1.08998 * 113.61362 * 254.53106 * 9 7 6 27 27 H 1.09000 * 113.61427 * 25.34494 * 9 7 6 28 28 H 0.96994 * 120.00475 * 359.97438 * 13 12 10 29 29 H 0.96999 * 119.99723 * 180.02562 * 13 12 10 30 30 H 1.08998 * 113.61326 * 334.56298 * 15 7 6 31 31 H 1.08994 * 113.61074 * 105.46837 * 15 7 6 32 32 H 1.07997 * 126.45092 * 180.25683 * 16 3 2 33 33 H 1.08001 * 126.06656 * 180.02562 * 17 16 3 34 34 H 1.08997 * 109.47243 * 90.02442 * 19 18 17 35 35 H 0.96700 * 113.99699 * 59.99683 * 20 19 18 36 36 H 1.48509 * 109.99752 * 179.97438 * 21 19 18 37 37 H 1.48498 * 109.99989 * 301.31532 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1182 0.0000 4 6 1.8124 2.5124 -0.0005 5 8 0.6245 2.7645 0.0792 6 7 2.7095 3.5143 -0.0893 7 6 2.2502 4.9004 -0.2085 8 1 1.2454 5.0499 0.1865 9 6 3.2710 5.9333 0.2974 10 6 2.8720 6.8039 -0.9058 11 1 3.7151 7.3073 -1.3791 12 6 1.7183 7.7314 -0.6236 13 7 1.2629 8.5537 -1.5895 14 8 1.1996 7.7380 0.4726 15 6 2.4566 5.4993 -1.6098 16 6 3.5780 0.6887 0.0061 17 6 3.5521 -0.7093 0.0045 18 6 2.2555 -1.1009 -0.0018 19 6 1.7709 -2.5279 -0.0061 20 8 0.5161 -2.6028 -0.6858 21 14 3.0157 -3.6039 -0.8798 22 1 -0.3633 -0.0347 -1.0271 23 1 -0.3634 -0.8721 0.5435 24 1 -0.3634 0.9068 0.4835 25 1 3.6592 3.3177 -0.0743 26 1 3.0080 6.3717 1.2600 27 1 4.3023 5.5825 0.2598 28 1 1.6780 8.5488 -2.4662 29 1 0.5206 9.1510 -1.4078 30 1 3.2655 5.0306 -2.1702 31 1 1.5361 5.5875 -2.1868 32 1 4.4583 1.3144 0.0116 33 1 4.4132 -1.3612 0.0085 34 1 1.6491 -2.8733 1.0205 35 1 0.5497 -2.3101 -1.6068 36 1 2.5497 -5.0139 -0.8902 37 1 3.2144 -3.1238 -2.2709 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_10803936.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:18:32 Heat of formation + Delta-G solvation = -28.512623 kcal Electronic energy + Delta-G solvation = -21854.945802 eV Core-core repulsion = 18407.520576 eV Total energy + Delta-G solvation = -3447.425226 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.126 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.57502 -41.63373 -39.97851 -38.26407 -37.85000 -34.85561 -34.56467 -33.56276 -31.35740 -27.80781 -27.38007 -26.85952 -26.11776 -23.41697 -22.60267 -21.39265 -20.70942 -20.12536 -18.87246 -18.31567 -18.11179 -18.03382 -17.11600 -16.93742 -16.43758 -16.07242 -15.73268 -15.66076 -15.21776 -15.16433 -14.78520 -14.45650 -14.26031 -14.17010 -13.78401 -13.65736 -13.39875 -13.20040 -13.11477 -12.87152 -12.39240 -11.95749 -11.88612 -11.70526 -11.11684 -10.93659 -10.76325 -10.70310 -10.09910 -9.72486 -9.07421 -4.98787 0.43359 1.10699 1.55709 1.56905 1.67022 1.72799 1.97399 2.39605 2.40586 2.44089 3.11200 3.31237 3.33465 3.54949 3.64068 3.74932 3.80463 4.00840 4.16155 4.33125 4.36600 4.44121 4.44937 4.49076 4.52056 4.66257 4.74798 4.81003 4.94052 5.00475 5.06372 5.16564 5.46894 5.71833 5.75256 5.99521 6.14500 6.23405 6.28732 6.49773 7.21356 7.24282 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.392 5.392 3 C -0.053 4.053 4 C 0.591 3.409 5 O -0.545 6.545 6 N -0.709 5.709 7 C 0.126 3.874 8 H 0.122 0.878 9 C -0.126 4.126 10 C -0.140 4.140 11 H 0.112 0.888 12 C 0.533 3.467 13 N -0.853 5.853 14 O -0.536 6.536 15 C -0.136 4.136 16 C -0.135 4.135 17 C -0.198 4.198 18 C 0.013 3.987 19 C -0.057 4.057 20 O -0.533 6.533 21 Si 0.719 3.281 22 H 0.073 0.927 23 H 0.093 0.907 24 H 0.102 0.898 25 H 0.404 0.596 26 H 0.092 0.908 27 H 0.097 0.903 28 H 0.403 0.597 29 H 0.404 0.596 30 H 0.099 0.901 31 H 0.077 0.923 32 H 0.147 0.853 33 H 0.154 0.846 34 H 0.124 0.876 35 H 0.377 0.623 36 H -0.255 1.255 37 H -0.258 1.258 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.339 0.357 -3.847 7.424 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.065 5.065 3 C -0.167 4.167 4 C 0.380 3.620 5 O -0.424 6.424 6 N -0.359 5.359 7 C 0.021 3.979 8 H 0.140 0.860 9 C -0.164 4.164 10 C -0.162 4.162 11 H 0.130 0.870 12 C 0.317 3.683 13 N -0.416 5.416 14 O -0.412 6.412 15 C -0.175 4.175 16 C -0.161 4.161 17 C -0.222 4.222 18 C -0.105 4.105 19 C -0.166 4.166 20 O -0.339 6.339 21 Si 0.617 3.383 22 H 0.091 0.909 23 H 0.111 0.889 24 H 0.121 0.879 25 H 0.240 0.760 26 H 0.111 0.889 27 H 0.115 0.885 28 H 0.231 0.769 29 H 0.235 0.765 30 H 0.118 0.882 31 H 0.096 0.904 32 H 0.165 0.835 33 H 0.171 0.829 34 H 0.141 0.859 35 H 0.225 0.775 36 H -0.180 1.180 37 H -0.182 1.182 Dipole moment (debyes) X Y Z Total from point charges 4.787 -0.333 -3.124 5.726 hybrid contribution -0.536 0.813 -1.122 1.486 sum 4.251 0.480 -4.246 6.027 Atomic orbital electron populations 1.22388 0.75572 1.05786 1.03935 1.43761 1.07000 1.04115 1.51588 1.20049 0.90558 0.87446 1.18679 1.17042 0.85672 0.83619 0.75705 1.90804 1.16361 1.84787 1.50408 1.45581 1.09643 1.05768 1.74930 1.22649 1.00626 0.78797 0.95852 0.85978 1.23239 0.99457 0.94815 0.98930 1.22262 0.97814 0.95386 1.00737 0.87009 1.20079 0.83824 0.80218 0.84214 1.43826 1.38931 1.43135 1.15721 1.90785 1.58723 1.68300 1.23344 1.23483 1.02932 0.93564 0.97531 1.21291 0.94311 0.95233 1.05291 1.20543 0.94919 0.95215 1.11511 1.21129 0.91107 0.89111 1.09142 1.24930 0.93499 0.94500 1.03661 1.86597 1.29825 1.88526 1.28958 0.94413 0.84735 0.77365 0.81781 0.90865 0.88854 0.87925 0.76036 0.88900 0.88459 0.76897 0.76507 0.88227 0.90424 0.83531 0.82896 0.85879 0.77511 1.17965 1.18173 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.12 9.39 59.85 0.56 0.68 16 2 N -0.39 -0.92 3.16 -115.62 -0.37 -1.29 16 3 C -0.05 -0.13 6.89 -81.98 -0.56 -0.69 16 4 C 0.59 1.95 7.77 -12.86 -0.10 1.85 16 5 O -0.54 -3.68 14.19 5.19 0.07 -3.61 16 6 N -0.71 0.00 5.34 -54.32 -0.29 -0.29 16 7 C 0.13 0.06 3.93 -67.11 -0.26 -0.20 16 8 H 0.12 0.49 7.35 -51.93 -0.38 0.11 16 9 C -0.13 0.16 7.20 -25.92 -0.19 -0.03 16 10 C -0.14 0.27 4.35 -90.87 -0.40 -0.12 16 11 H 0.11 -0.49 8.14 -51.92 -0.42 -0.91 16 12 C 0.53 0.49 7.36 -10.98 -0.08 0.41 16 13 N -0.85 1.98 8.87 31.22 0.28 2.26 16 14 O -0.54 -3.05 16.59 5.56 0.09 -2.96 16 15 C -0.14 0.25 7.46 -25.83 -0.19 0.06 16 16 C -0.13 0.00 10.36 -39.12 -0.41 -0.41 16 17 C -0.20 0.07 9.37 -39.98 -0.37 -0.31 16 18 C 0.01 0.01 6.14 -81.95 -0.50 -0.49 16 19 C -0.06 0.04 2.89 36.01 0.10 0.14 16 20 O -0.53 -0.19 10.45 -35.23 -0.37 -0.56 16 21 Si 0.72 -1.27 31.10 -169.99 -5.29 -6.55 16 22 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 23 H 0.09 0.11 6.95 -51.93 -0.36 -0.25 16 24 H 0.10 0.36 6.13 -51.93 -0.32 0.04 16 25 H 0.40 -1.18 7.63 -40.82 -0.31 -1.50 16 26 H 0.09 0.09 7.43 -51.93 -0.39 -0.30 16 27 H 0.10 -0.36 8.12 -51.93 -0.42 -0.78 16 28 H 0.40 -2.13 8.83 -40.82 -0.36 -2.49 16 29 H 0.40 -1.03 8.93 -40.82 -0.36 -1.39 16 30 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16 31 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 32 H 0.15 -0.44 7.45 -52.49 -0.39 -0.84 16 33 H 0.15 -0.50 6.85 -52.49 -0.36 -0.86 16 34 H 0.12 -0.16 7.96 -51.93 -0.41 -0.58 16 35 H 0.38 -0.70 8.70 45.56 0.40 -0.30 16 36 H -0.25 -0.34 7.11 56.52 0.40 0.07 16 37 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 LS Contribution 311.87 15.07 4.70 4.70 Total: 0.00 -10.72 311.87 -8.13 -18.85 By element: Atomic # 1 Polarization: -6.86 SS G_CDS: -4.56 Total: -11.42 kcal Atomic # 6 Polarization: 3.28 SS G_CDS: -2.40 Total: 0.88 kcal Atomic # 7 Polarization: 1.05 SS G_CDS: -0.38 Total: 0.67 kcal Atomic # 8 Polarization: -6.92 SS G_CDS: -0.20 Total: -7.13 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.29 Total: -6.55 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -10.72 -8.13 -18.85 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_10803936.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.667 kcal (2) G-P(sol) polarization free energy of solvation -10.719 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.387 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.126 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.845 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.513 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds