Wall clock time and date at job start Thu Mar 4 2021 13:18:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37651 * 125.67495 * 2 1 4 4 C 1.46667 * 126.23686 * 359.97438 * 3 2 1 5 5 O 1.21697 * 120.00025 * 4.36757 * 4 3 2 6 6 N 1.34775 * 120.00158 * 184.36587 * 4 3 2 7 7 C 1.46505 * 120.00095 * 174.62623 * 6 4 3 8 8 H 1.08998 * 112.90912 * 23.75180 * 7 6 4 9 9 C 1.53782 * 113.61443 * 155.00210 * 7 6 4 10 10 C 1.53782 * 87.17071 * 139.93927 * 9 7 6 11 11 H 1.09010 * 113.60998 * 220.05913 * 10 9 7 12 12 C 1.50699 * 113.61458 * 89.16036 * 10 9 7 13 13 N 1.34780 * 119.99703 * 179.97438 * 12 10 9 14 14 O 1.21275 * 120.00136 * 359.97438 * 12 10 9 15 15 C 1.53787 * 113.61338 * 252.49863 * 7 6 4 16 16 C 1.37879 * 107.52720 * 179.73519 * 3 2 1 17 17 C 1.39831 * 107.08679 * 0.22590 * 16 3 2 18 18 C 1.35448 * 107.86675 * 359.97438 * 17 16 3 19 19 C 1.50702 * 125.56571 * 179.97438 * 18 17 16 20 20 O 1.42902 * 109.47351 * 210.02287 * 19 18 17 21 21 Si 1.86301 * 109.46914 * 330.02471 * 19 18 17 22 22 H 1.09002 * 109.47115 * 91.93336 * 1 2 3 23 23 H 1.08998 * 109.47377 * 211.92937 * 1 2 3 24 24 H 1.08998 * 109.47363 * 331.93517 * 1 2 3 25 25 H 0.96999 * 120.00355 * 354.62535 * 6 4 3 26 26 H 1.08998 * 113.61362 * 254.53106 * 9 7 6 27 27 H 1.09000 * 113.61427 * 25.34494 * 9 7 6 28 28 H 0.96994 * 120.00475 * 359.97438 * 13 12 10 29 29 H 0.96999 * 119.99723 * 180.02562 * 13 12 10 30 30 H 1.08998 * 113.61326 * 334.56298 * 15 7 6 31 31 H 1.08994 * 113.61074 * 105.46837 * 15 7 6 32 32 H 1.07997 * 126.45092 * 180.25683 * 16 3 2 33 33 H 1.08001 * 126.06656 * 180.02562 * 17 16 3 34 34 H 1.08997 * 109.47243 * 90.02442 * 19 18 17 35 35 H 0.96700 * 113.99699 * 59.99683 * 20 19 18 36 36 H 1.48509 * 109.99752 * 179.97438 * 21 19 18 37 37 H 1.48498 * 109.99989 * 301.31532 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1182 0.0000 4 6 1.8124 2.5124 -0.0005 5 8 0.6245 2.7645 0.0792 6 7 2.7095 3.5143 -0.0893 7 6 2.2502 4.9004 -0.2085 8 1 1.2454 5.0499 0.1865 9 6 3.2710 5.9333 0.2974 10 6 2.8720 6.8039 -0.9058 11 1 3.7151 7.3073 -1.3791 12 6 1.7183 7.7314 -0.6236 13 7 1.2629 8.5537 -1.5895 14 8 1.1996 7.7380 0.4726 15 6 2.4566 5.4993 -1.6098 16 6 3.5780 0.6887 0.0061 17 6 3.5521 -0.7093 0.0045 18 6 2.2555 -1.1009 -0.0018 19 6 1.7709 -2.5279 -0.0061 20 8 0.5161 -2.6028 -0.6858 21 14 3.0157 -3.6039 -0.8798 22 1 -0.3633 -0.0347 -1.0271 23 1 -0.3634 -0.8721 0.5435 24 1 -0.3634 0.9068 0.4835 25 1 3.6592 3.3177 -0.0743 26 1 3.0080 6.3717 1.2600 27 1 4.3023 5.5825 0.2598 28 1 1.6780 8.5488 -2.4662 29 1 0.5206 9.1510 -1.4078 30 1 3.2655 5.0306 -2.1702 31 1 1.5361 5.5875 -2.1868 32 1 4.4583 1.3144 0.0116 33 1 4.4132 -1.3612 0.0085 34 1 1.6491 -2.8733 1.0205 35 1 0.5497 -2.3101 -1.6068 36 1 2.5497 -5.0139 -0.8902 37 1 3.2144 -3.1238 -2.2709 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_10803936.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:18:31 Heat of formation + Delta-G solvation = -35.174525 kcal Electronic energy + Delta-G solvation = -21855.234684 eV Core-core repulsion = 18407.520576 eV Total energy + Delta-G solvation = -3447.714108 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.126 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.61337 -41.64265 -40.13750 -38.34224 -37.86448 -34.95979 -34.58750 -33.63003 -31.36983 -27.82025 -27.46531 -26.74700 -26.10334 -23.45004 -22.64245 -21.44232 -20.73585 -20.12802 -18.89901 -18.30309 -18.09242 -18.02577 -17.19755 -16.98424 -16.50064 -16.12057 -15.79256 -15.68722 -15.29244 -15.28020 -14.80775 -14.53048 -14.30461 -14.20383 -13.78156 -13.57475 -13.35439 -13.26598 -13.08042 -12.91699 -12.41272 -11.96224 -11.86648 -11.67367 -11.23357 -11.01031 -10.85236 -10.71066 -10.18608 -9.74788 -9.09932 -4.86205 0.35011 1.18182 1.53034 1.56581 1.74178 1.76349 2.03088 2.30236 2.35202 2.53698 3.19061 3.37987 3.41931 3.57594 3.67646 3.78695 3.88706 3.94212 4.23567 4.27058 4.36289 4.49123 4.52433 4.55058 4.64539 4.69610 4.79701 4.84948 4.99705 5.07154 5.12079 5.19700 5.46580 5.74029 5.83254 5.99045 6.13154 6.31999 6.42345 6.49072 7.12425 7.30079 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.072 3.928 2 N -0.409 5.409 3 C -0.087 4.087 4 C 0.583 3.417 5 O -0.595 6.595 6 N -0.690 5.690 7 C 0.111 3.889 8 H 0.075 0.925 9 C -0.119 4.119 10 C -0.130 4.130 11 H 0.151 0.849 12 C 0.521 3.479 13 N -0.837 5.837 14 O -0.595 6.595 15 C -0.121 4.121 16 C -0.120 4.120 17 C -0.201 4.201 18 C 0.006 3.994 19 C -0.070 4.070 20 O -0.549 6.549 21 Si 0.820 3.180 22 H 0.076 0.924 23 H 0.096 0.904 24 H 0.078 0.922 25 H 0.421 0.579 26 H 0.064 0.936 27 H 0.133 0.867 28 H 0.419 0.581 29 H 0.405 0.595 30 H 0.129 0.871 31 H 0.066 0.934 32 H 0.180 0.820 33 H 0.187 0.813 34 H 0.130 0.870 35 H 0.385 0.615 36 H -0.299 1.299 37 H -0.289 1.289 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.338 0.049 -4.995 10.590 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 N -0.082 5.082 3 C -0.200 4.200 4 C 0.373 3.627 5 O -0.478 6.478 6 N -0.341 5.341 7 C 0.006 3.994 8 H 0.093 0.907 9 C -0.157 4.157 10 C -0.151 4.151 11 H 0.168 0.832 12 C 0.307 3.693 13 N -0.400 5.400 14 O -0.476 6.476 15 C -0.159 4.159 16 C -0.147 4.147 17 C -0.224 4.224 18 C -0.111 4.111 19 C -0.178 4.178 20 O -0.357 6.357 21 Si 0.722 3.278 22 H 0.095 0.905 23 H 0.115 0.885 24 H 0.097 0.903 25 H 0.260 0.740 26 H 0.083 0.917 27 H 0.151 0.849 28 H 0.251 0.749 29 H 0.236 0.764 30 H 0.147 0.853 31 H 0.085 0.915 32 H 0.197 0.803 33 H 0.204 0.796 34 H 0.148 0.852 35 H 0.234 0.766 36 H -0.227 1.227 37 H -0.216 1.216 Dipole moment (debyes) X Y Z Total from point charges 7.840 -0.589 -4.307 8.964 hybrid contribution -1.508 0.891 -0.789 1.921 sum 6.331 0.302 -5.096 8.133 Atomic orbital electron populations 1.22215 0.76234 1.04606 1.03879 1.43905 1.06972 1.04814 1.52553 1.20199 0.91728 0.86945 1.21105 1.17391 0.85387 0.84713 0.75250 1.90778 1.18453 1.85516 1.53010 1.45440 1.10092 1.04991 1.73560 1.22608 0.99182 0.79462 0.98144 0.90695 1.23278 1.00593 0.93933 0.97898 1.22254 0.97578 0.94879 1.00395 0.83177 1.20726 0.84259 0.80601 0.83730 1.43758 1.38410 1.41900 1.15947 1.90761 1.60759 1.70210 1.25867 1.23450 1.03464 0.93097 0.95938 1.21760 0.94142 0.95878 1.02878 1.21032 0.95326 0.95582 1.10454 1.21532 0.91661 0.89194 1.08736 1.25309 0.93709 0.94261 1.04475 1.86571 1.30746 1.88601 1.29753 0.93300 0.82634 0.73119 0.78714 0.90537 0.88516 0.90287 0.74010 0.91679 0.84861 0.74900 0.76420 0.85267 0.91510 0.80252 0.79616 0.85225 0.76620 1.22671 1.21578 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.44 9.39 127.77 1.20 1.64 16 2 N -0.41 -2.35 3.16 -519.71 -1.64 -3.99 16 3 C -0.09 -0.46 6.89 40.35 0.28 -0.18 16 4 C 0.58 4.89 7.77 86.44 0.67 5.56 16 5 O -0.59 -10.28 14.19 -4.34 -0.06 -10.34 16 6 N -0.69 -0.26 5.34 -443.99 -2.37 -2.63 16 7 C 0.11 0.24 3.93 45.52 0.18 0.42 16 8 H 0.07 0.92 7.35 -2.39 -0.02 0.90 16 9 C -0.12 0.32 7.20 31.12 0.22 0.55 16 10 C -0.13 0.63 4.35 -10.96 -0.05 0.59 16 11 H 0.15 -1.83 8.14 -2.38 -0.02 -1.85 16 12 C 0.52 1.45 7.36 87.66 0.65 2.10 16 13 N -0.84 3.77 8.87 -173.53 -1.54 2.23 16 14 O -0.60 -8.48 16.59 -3.01 -0.05 -8.53 16 15 C -0.12 0.54 7.46 31.18 0.23 0.77 16 16 C -0.12 0.20 10.36 22.57 0.23 0.44 16 17 C -0.20 0.53 9.37 22.01 0.21 0.74 16 18 C 0.01 0.01 6.14 41.34 0.25 0.26 16 19 C -0.07 0.11 2.89 71.24 0.21 0.32 16 20 O -0.55 -0.71 10.45 -148.98 -1.56 -2.26 16 21 Si 0.82 -3.65 31.10 68.60 2.13 -1.52 16 22 H 0.08 0.33 8.14 -2.39 -0.02 0.31 16 23 H 0.10 0.43 6.95 -2.39 -0.02 0.41 16 24 H 0.08 0.86 6.13 -2.39 -0.01 0.85 16 25 H 0.42 -3.10 7.63 -92.71 -0.71 -3.81 16 26 H 0.06 0.24 7.43 -2.39 -0.02 0.22 16 27 H 0.13 -1.35 8.12 -2.39 -0.02 -1.37 16 28 H 0.42 -4.86 8.83 -92.71 -0.82 -5.68 16 29 H 0.40 -1.78 8.93 -92.71 -0.83 -2.61 16 30 H 0.13 -1.29 8.14 -2.39 -0.02 -1.31 16 31 H 0.07 -0.12 8.10 -2.39 -0.02 -0.14 16 32 H 0.18 -1.69 7.45 -2.91 -0.02 -1.71 16 33 H 0.19 -1.87 6.85 -2.91 -0.02 -1.89 16 34 H 0.13 -0.40 7.96 -2.39 -0.02 -0.42 16 35 H 0.38 -1.16 8.70 -74.06 -0.64 -1.80 16 36 H -0.30 -0.85 7.11 99.48 0.71 -0.15 16 37 H -0.29 -0.26 7.11 99.48 0.71 0.45 16 Total: 0.00 -30.83 311.87 -2.61 -33.44 By element: Atomic # 1 Polarization: -17.78 SS G_CDS: -1.81 Total: -19.59 kcal Atomic # 6 Polarization: 8.91 SS G_CDS: 4.28 Total: 13.19 kcal Atomic # 7 Polarization: 1.16 SS G_CDS: -5.55 Total: -4.39 kcal Atomic # 8 Polarization: -19.47 SS G_CDS: -1.67 Total: -21.13 kcal Atomic # 14 Polarization: -3.65 SS G_CDS: 2.13 Total: -1.52 kcal Total: -30.83 -2.61 -33.44 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_10803936.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.735 kcal (2) G-P(sol) polarization free energy of solvation -30.827 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.562 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.613 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.440 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.175 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds