Wall clock time and date at job start Thu Mar 4 2021 13:18:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21283 * 120.00077 * 2 1 4 4 C 1.50699 * 119.99832 * 179.97438 * 2 1 3 5 5 H 1.09008 * 112.90551 * 311.25154 * 4 2 1 6 6 C 1.54055 * 113.61951 * 82.50574 * 4 2 1 7 7 C 1.53779 * 86.98269 * 139.98264 * 6 4 2 8 8 H 1.09006 * 113.60630 * 219.97823 * 7 6 4 9 9 N 1.46500 * 113.61905 * 89.16535 * 7 6 4 10 10 C 1.34774 * 120.00242 * 105.85519 * 9 7 6 11 11 O 1.21724 * 119.99691 * 0.02562 * 10 9 7 12 12 C 1.46568 * 120.00281 * 180.02562 * 10 9 7 13 13 C 1.40844 * 126.58216 * 180.02562 * 12 10 9 14 14 C 1.40092 * 132.86831 * 0.04286 * 13 12 10 15 15 C 1.36445 * 119.25877 * 179.97438 * 14 13 12 16 16 C 1.50693 * 120.30044 * 179.97438 * 15 14 13 17 17 O 1.42907 * 109.47661 * 240.00492 * 16 15 14 18 18 Si 1.86298 * 109.47618 * 120.00182 * 16 15 14 19 19 C 1.40159 * 119.40733 * 0.25997 * 15 14 13 20 20 C 1.35192 * 120.31752 * 359.47393 * 19 15 14 21 21 N 1.36237 * 120.70421 * 0.52828 * 20 19 15 22 22 N 1.40020 * 132.01102 * 179.77662 * 21 20 19 23 23 C 1.30740 * 109.60150 * 179.97438 * 22 21 20 24 24 C 1.53777 * 113.61829 * 180.02562 * 4 2 1 25 25 H 0.96998 * 120.00622 * 179.97438 * 1 2 3 26 26 H 0.97003 * 119.99190 * 0.02562 * 1 2 3 27 27 H 1.08997 * 113.61128 * 25.47040 * 6 4 2 28 28 H 1.09006 * 113.69152 * 254.49601 * 6 4 2 29 29 H 0.96999 * 119.99626 * 285.86373 * 9 7 6 30 30 H 1.08004 * 120.37280 * 359.97438 * 14 13 12 31 31 H 1.09000 * 109.46936 * 0.02562 * 16 15 14 32 32 H 0.96697 * 114.00527 * 179.97438 * 17 16 15 33 33 H 1.48506 * 109.99834 * 298.68714 * 18 16 15 34 34 H 1.48502 * 110.00011 * 59.99978 * 18 16 15 35 35 H 1.07999 * 119.84511 * 179.72537 * 19 15 14 36 36 H 1.08003 * 119.64695 * 180.26542 * 20 19 15 37 37 H 1.08009 * 125.62557 * 180.02562 * 23 22 21 38 38 H 1.08993 * 113.61811 * 105.47111 * 24 4 2 39 39 H 1.08999 * 113.61062 * 334.56607 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3051 0.0006 5 1 1.7400 -2.0032 0.7558 6 6 2.2504 -1.9323 -1.3986 7 6 3.6824 -2.3122 -0.9865 8 1 4.4150 -2.1819 -1.7831 9 7 3.7780 -3.6206 -0.3343 10 6 4.2954 -4.6704 -1.0024 11 8 4.6838 -4.5315 -2.1476 12 6 4.3905 -5.9795 -0.3501 13 6 4.9045 -7.1632 -0.9144 14 6 5.4481 -7.4624 -2.1704 15 6 5.8713 -8.7337 -2.4282 16 6 6.4592 -9.0816 -3.7714 17 8 5.6700 -10.1016 -4.3872 18 14 8.2030 -9.6971 -3.5456 19 6 5.7487 -9.7146 -1.4346 20 6 5.2258 -9.4020 -0.2278 21 7 4.8006 -8.1355 0.0391 22 7 4.2293 -7.5598 1.1805 23 6 3.9861 -6.2945 0.9586 24 6 3.6295 -1.1342 0.0011 25 1 -0.4851 -0.8400 -0.0004 26 1 -0.4849 0.8401 -0.0004 27 1 2.2076 -1.2055 -2.2097 28 1 1.6012 -2.7921 -1.5646 29 1 3.4687 -3.7312 0.5784 30 1 5.5313 -6.6954 -2.9262 31 1 6.4665 -8.1950 -4.4054 32 1 5.9906 -10.3754 -5.2574 33 1 9.0416 -8.6344 -2.9352 34 1 8.2072 -10.9057 -2.6826 35 1 6.0773 -10.7242 -1.6326 36 1 5.1404 -10.1653 0.5315 37 1 3.5473 -5.6049 1.6647 38 1 4.0927 -1.3502 0.9638 39 1 3.9633 -0.1895 -0.4279 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_11618758.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:18:34 Heat of formation + Delta-G solvation = 31.117399 kcal Electronic energy + Delta-G solvation = -25587.830476 eV Core-core repulsion = 21692.886669 eV Total energy + Delta-G solvation = -3894.943806 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.121 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -43.33535 -41.57620 -40.11139 -39.23372 -38.30437 -37.34928 -34.64517 -34.38071 -33.99861 -32.20201 -30.38701 -27.74545 -26.96789 -26.80748 -25.03331 -23.83858 -23.04823 -22.11617 -21.33478 -20.27701 -19.30809 -18.63089 -18.35881 -17.95039 -17.82200 -17.50317 -16.94310 -16.86602 -16.71563 -16.05247 -15.90977 -15.76766 -15.54314 -15.20900 -15.08152 -14.63554 -14.39504 -14.32424 -13.95175 -13.61459 -13.36501 -13.33795 -13.05092 -12.85524 -12.63638 -12.11827 -11.96517 -11.81451 -11.64612 -11.61305 -10.83602 -10.82513 -10.80418 -10.67983 -10.31307 -10.05493 -8.81403 -5.17677 -0.60989 -0.16541 0.95643 1.02082 1.10931 1.51235 1.62435 1.84258 1.98522 2.15136 2.51821 2.55557 2.93881 3.07960 3.32893 3.37775 3.40324 3.57448 3.64391 3.71826 3.80966 3.81112 3.94887 4.10119 4.12418 4.21104 4.28559 4.48466 4.53346 4.66393 4.67978 4.79591 4.82846 4.88354 5.04602 5.05566 5.11426 5.21431 5.58049 5.60430 5.78427 6.26791 6.32527 6.43549 6.55164 7.27919 7.34295 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.855 5.855 2 C 0.526 3.474 3 O -0.541 6.541 4 C -0.142 4.142 5 H 0.113 0.887 6 C -0.134 4.134 7 C 0.125 3.875 8 H 0.110 0.890 9 N -0.712 5.712 10 C 0.605 3.395 11 O -0.546 6.546 12 C -0.316 4.316 13 C 0.169 3.831 14 C -0.094 4.094 15 C -0.030 4.030 16 C -0.073 4.073 17 O -0.543 6.543 18 Si 0.704 3.296 19 C -0.145 4.145 20 C 0.113 3.887 21 N -0.265 5.265 22 N -0.311 5.311 23 C 0.120 3.880 24 C -0.122 4.122 25 H 0.402 0.598 26 H 0.402 0.598 27 H 0.097 0.903 28 H 0.081 0.919 29 H 0.399 0.601 30 H 0.165 0.835 31 H 0.083 0.917 32 H 0.388 0.612 33 H -0.255 1.255 34 H -0.249 1.249 35 H 0.162 0.838 36 H 0.179 0.821 37 H 0.199 0.801 38 H 0.080 0.920 39 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.629 -4.699 -1.541 4.985 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.418 5.418 2 C 0.311 3.689 3 O -0.417 6.417 4 C -0.164 4.164 5 H 0.131 0.869 6 C -0.173 4.173 7 C 0.019 3.981 8 H 0.128 0.872 9 N -0.363 5.363 10 C 0.394 3.606 11 O -0.424 6.424 12 C -0.331 4.331 13 C 0.048 3.952 14 C -0.113 4.113 15 C -0.035 4.035 16 C -0.183 4.183 17 O -0.349 6.349 18 Si 0.602 3.398 19 C -0.166 4.166 20 C -0.012 4.012 21 N -0.029 5.029 22 N -0.132 5.132 23 C -0.061 4.061 24 C -0.160 4.160 25 H 0.230 0.770 26 H 0.232 0.768 27 H 0.115 0.885 28 H 0.100 0.900 29 H 0.233 0.767 30 H 0.183 0.817 31 H 0.101 0.899 32 H 0.236 0.764 33 H -0.180 1.180 34 H -0.173 1.173 35 H 0.180 0.820 36 H 0.196 0.804 37 H 0.216 0.784 38 H 0.099 0.901 39 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 0.384 -5.028 -0.244 5.049 hybrid contribution -1.296 0.783 0.298 1.543 sum -0.912 -4.245 0.054 4.343 Atomic orbital electron populations 1.43918 1.07349 1.12617 1.77929 1.20476 0.82561 0.91155 0.74712 1.90767 1.68234 1.33514 1.49182 1.22919 0.97401 0.95379 1.00684 0.86867 1.23419 0.97984 1.00895 0.94974 1.21777 0.97735 0.81920 0.96630 0.87153 1.45367 1.64897 1.08766 1.17298 1.16802 0.76304 0.82340 0.85108 1.90790 1.49488 1.84597 1.17548 1.19566 1.22544 0.94261 0.96721 1.19227 0.97098 0.88795 0.90112 1.20708 0.98103 0.97472 0.95034 1.19449 0.95512 0.93164 0.95396 1.24695 1.05709 0.95330 0.92534 1.86473 1.54910 1.56160 1.37397 0.95303 0.74088 0.81159 0.89225 1.20852 1.02773 1.01562 0.91447 1.21590 0.96847 0.84056 0.98741 1.46091 1.38499 1.07733 1.10587 1.77641 1.22403 1.10132 1.03005 1.24064 0.94268 0.92919 0.94892 1.23249 0.92932 0.99284 1.00577 0.76985 0.76771 0.88491 0.90008 0.76701 0.81711 0.89913 0.76380 1.17979 1.17275 0.82032 0.80431 0.78417 0.90086 0.87080 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.86 1.97 8.87 31.22 0.28 2.25 16 2 C 0.53 0.43 7.63 -10.99 -0.08 0.34 16 3 O -0.54 -2.99 16.74 5.55 0.09 -2.89 16 4 C -0.14 0.26 4.04 -90.82 -0.37 -0.11 16 5 H 0.11 -0.47 8.14 -51.92 -0.42 -0.89 16 6 C -0.13 0.18 7.45 -25.78 -0.19 -0.01 16 7 C 0.13 -0.05 4.30 -67.10 -0.29 -0.33 16 8 H 0.11 0.16 7.50 -51.93 -0.39 -0.23 16 9 N -0.71 0.46 5.25 -54.34 -0.29 0.17 16 10 C 0.61 1.70 7.78 -12.90 -0.10 1.60 16 11 O -0.55 -3.30 15.32 5.17 0.08 -3.22 16 12 C -0.32 -0.82 6.17 -104.68 -0.65 -1.46 16 13 C 0.17 0.59 6.76 -84.07 -0.57 0.02 16 14 C -0.09 -0.24 9.35 -39.53 -0.37 -0.61 16 15 C -0.03 -0.03 4.53 -104.55 -0.47 -0.51 16 16 C -0.07 0.11 2.81 36.00 0.10 0.21 16 17 O -0.54 0.84 12.75 -35.23 -0.45 0.39 16 18 Si 0.70 -1.74 31.98 -169.99 -5.44 -7.18 16 19 C -0.14 -0.03 8.67 -39.95 -0.35 -0.38 16 20 C 0.11 0.07 11.17 -16.68 -0.19 -0.12 16 21 N -0.26 -0.78 3.86 -10.55 -0.04 -0.82 16 22 N -0.31 -0.93 12.57 30.75 0.39 -0.54 16 23 C 0.12 0.08 11.44 -17.14 -0.20 -0.11 16 24 C -0.12 0.11 7.15 -25.90 -0.19 -0.08 16 25 H 0.40 -2.04 8.83 -40.82 -0.36 -2.40 16 26 H 0.40 -1.02 8.93 -40.82 -0.36 -1.38 16 27 H 0.10 -0.07 8.10 -51.93 -0.42 -0.49 16 28 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 29 H 0.40 -1.39 7.62 -40.82 -0.31 -1.71 16 30 H 0.17 0.41 7.01 -52.48 -0.37 0.05 16 31 H 0.08 -0.22 7.70 -51.93 -0.40 -0.62 16 32 H 0.39 -2.51 8.74 45.56 0.40 -2.11 16 33 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 34 H -0.25 0.06 7.08 56.52 0.40 0.46 16 35 H 0.16 -0.26 7.55 -52.49 -0.40 -0.66 16 36 H 0.18 -0.41 8.06 -52.48 -0.42 -0.84 16 37 H 0.20 -0.77 7.46 -52.48 -0.39 -1.16 16 38 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.11 0.08 7.43 -51.93 -0.39 -0.30 16 LS Contribution 340.14 15.07 5.13 5.13 Total: 0.00 -13.10 340.14 -8.43 -21.53 By element: Atomic # 1 Polarization: -8.98 SS G_CDS: -4.28 Total: -13.26 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -3.90 Total: -1.55 kcal Atomic # 7 Polarization: 0.71 SS G_CDS: 0.34 Total: 1.05 kcal Atomic # 8 Polarization: -5.44 SS G_CDS: -0.28 Total: -5.72 kcal Atomic # 14 Polarization: -1.74 SS G_CDS: -5.44 Total: -7.18 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -13.10 -8.43 -21.53 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_11618758.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.651 kcal (2) G-P(sol) polarization free energy of solvation -13.104 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 39.547 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.534 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.117 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds