Wall clock time and date at job start Thu Mar 4 2021 13:18:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.35452 * 125.56754 * 2 1 4 4 C 1.50703 * 126.06227 * 359.95173 * 3 2 1 5 5 O 1.42898 * 109.47155 * 210.02713 * 4 3 2 6 6 Si 1.86300 * 109.47336 * 330.02863 * 4 3 2 7 7 C 1.39831 * 107.86835 * 179.97438 * 3 2 1 8 8 C 1.50703 * 126.45684 * 179.97438 * 7 3 2 9 9 C 1.37869 * 107.08438 * 0.24262 * 7 3 2 10 10 C 1.46677 * 126.23296 * 179.76609 * 9 7 3 11 11 O 1.21703 * 119.99956 * 359.97438 * 10 9 7 12 12 N 1.34774 * 120.00107 * 179.97438 * 10 9 7 13 13 C 1.46506 * 120.00033 * 179.97438 * 12 10 9 14 14 H 1.08999 * 112.84917 * 23.79740 * 13 12 10 15 15 C 1.53782 * 113.61362 * 154.99883 * 13 12 10 16 16 C 1.53784 * 87.08166 * 139.97936 * 15 13 12 17 17 H 1.08997 * 113.61264 * 220.01591 * 16 15 13 18 18 C 1.50698 * 113.61067 * 89.11393 * 16 15 13 19 19 N 1.34785 * 119.99510 * 180.02562 * 18 16 15 20 20 O 1.21279 * 120.00406 * 0.02562 * 18 16 15 21 21 C 1.53781 * 87.07933 * 334.56661 * 16 15 13 22 22 N 1.35536 * 125.56554 * 179.97438 * 2 1 3 23 23 H 1.08999 * 109.46712 * 90.00006 * 1 2 3 24 24 H 1.09003 * 109.46977 * 210.00188 * 1 2 3 25 25 H 1.08994 * 109.47245 * 330.00432 * 1 2 3 26 26 H 1.09005 * 109.46706 * 90.02977 * 4 3 2 27 27 H 0.96698 * 113.99897 * 60.00119 * 5 4 3 28 28 H 1.48502 * 109.99855 * 179.97438 * 6 4 3 29 29 H 1.48499 * 110.00009 * 301.31745 * 6 4 3 30 30 H 1.09002 * 109.47152 * 89.99954 * 8 7 3 31 31 H 1.09001 * 109.46980 * 330.00054 * 8 7 3 32 32 H 1.09004 * 109.47113 * 210.00035 * 8 7 3 33 33 H 0.97005 * 120.00370 * 359.97438 * 12 10 9 34 34 H 1.09004 * 113.61246 * 254.52940 * 15 13 12 35 35 H 1.09005 * 113.61525 * 25.34415 * 15 13 12 36 36 H 0.96995 * 119.99556 * 0.02562 * 19 18 16 37 37 H 0.96997 * 119.99422 * 180.02562 * 19 18 16 38 38 H 1.09004 * 113.61571 * 270.88397 * 21 16 15 39 39 H 1.08998 * 113.61710 * 139.98318 * 21 16 15 40 40 H 0.97002 * 125.67874 * 0.02562 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2949 1.1018 0.0000 4 6 1.8199 2.5320 -0.0010 5 8 2.7772 3.3514 -0.6750 6 14 0.1808 2.6415 -0.8797 7 6 3.6270 0.6767 0.0006 8 6 4.8486 1.5592 0.0003 9 6 3.6122 -0.7019 -0.0046 10 6 4.7859 -1.5815 -0.0108 11 8 5.9049 -1.1030 -0.0122 12 7 4.6253 -2.9196 -0.0150 13 6 5.7977 -3.7982 -0.0218 14 1 6.6888 -3.3179 0.3824 15 6 5.5267 -5.1916 0.5697 16 6 6.4052 -5.7554 -0.5596 17 1 6.0234 -6.6818 -0.9887 18 6 7.8680 -5.8320 -0.2054 19 7 8.7546 -6.3069 -1.1026 20 8 8.2474 -5.4664 0.8870 21 6 6.0322 -4.5020 -1.3688 22 7 2.2953 -1.1025 0.0005 23 1 -0.3633 0.0000 -1.0277 24 1 -0.3633 -0.8900 0.5139 25 1 -0.3633 0.8900 0.5137 26 1 1.7052 2.8775 1.0265 27 1 2.9301 3.1008 -1.5963 28 1 -0.2987 4.0470 -0.8869 29 1 0.3166 2.1435 -2.2720 30 1 5.1429 1.7727 1.0279 31 1 4.6221 2.4930 -0.5143 32 1 5.6644 1.0501 -0.5131 33 1 3.7334 -3.3011 -0.0136 34 1 5.9497 -5.3335 1.5642 35 1 4.4823 -5.4973 0.5063 36 1 8.4511 -6.5989 -1.9764 37 1 9.6960 -6.3566 -0.8745 38 1 5.1263 -4.6198 -1.9635 39 1 6.8632 -4.0873 -1.9393 40 1 1.9834 -2.0210 0.0006 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_12297754.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:18:37 Heat of formation + Delta-G solvation = -39.598929 kcal Electronic energy + Delta-G solvation = -23815.707559 eV Core-core repulsion = 20212.263975 eV Total energy + Delta-G solvation = -3603.443583 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.141 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.66771 -41.67417 -39.99104 -38.26113 -37.82321 -34.81940 -34.51782 -33.63131 -32.94219 -29.32500 -28.11462 -26.90899 -26.71302 -25.93584 -23.13586 -22.25225 -20.80628 -20.63416 -20.12521 -19.24221 -18.28852 -18.13943 -17.50786 -17.06485 -16.73840 -16.58534 -16.02758 -15.87895 -15.63074 -15.41823 -15.05003 -14.72938 -14.30816 -14.26933 -14.05715 -13.99560 -13.70165 -13.65380 -13.38852 -13.21814 -13.14979 -13.09827 -12.44187 -12.24406 -11.91870 -11.75702 -11.74591 -11.01327 -10.91306 -10.72376 -10.41611 -10.15475 -9.47848 -8.96547 -4.80367 0.43306 1.23139 1.54679 1.68065 1.69487 1.94697 2.05557 2.12477 2.38923 2.42035 3.26457 3.30117 3.44105 3.62281 3.64384 3.70897 3.82766 3.99229 4.04048 4.12230 4.31382 4.39422 4.42012 4.43993 4.61264 4.66127 4.71265 4.73121 4.76748 4.88933 4.96180 5.02038 5.18808 5.37231 5.44082 5.52691 5.73726 5.75523 5.97531 6.26775 6.29326 6.47209 6.57912 7.20223 7.22325 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.103 4.103 2 C 0.066 3.934 3 C -0.211 4.211 4 C -0.034 4.034 5 O -0.527 6.527 6 Si 0.654 3.346 7 C -0.040 4.040 8 C -0.101 4.101 9 C -0.067 4.067 10 C 0.591 3.409 11 O -0.520 6.520 12 N -0.724 5.724 13 C 0.126 3.874 14 H 0.124 0.876 15 C -0.127 4.127 16 C -0.139 4.139 17 H 0.111 0.889 18 C 0.533 3.467 19 N -0.852 5.852 20 O -0.535 6.535 21 C -0.136 4.136 22 N -0.535 5.535 23 H 0.087 0.913 24 H 0.087 0.913 25 H 0.102 0.898 26 H 0.112 0.888 27 H 0.374 0.626 28 H -0.255 1.255 29 H -0.261 1.261 30 H 0.066 0.934 31 H 0.081 0.919 32 H 0.075 0.925 33 H 0.393 0.607 34 H 0.093 0.907 35 H 0.094 0.906 36 H 0.403 0.597 37 H 0.404 0.596 38 H 0.097 0.903 39 H 0.079 0.921 40 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.782 -6.527 -3.354 9.992 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C -0.053 4.053 3 C -0.218 4.218 4 C -0.145 4.145 5 O -0.333 6.333 6 Si 0.555 3.445 7 C -0.048 4.048 8 C -0.158 4.158 9 C -0.179 4.179 10 C 0.380 3.620 11 O -0.395 6.395 12 N -0.374 5.374 13 C 0.021 3.979 14 H 0.141 0.859 15 C -0.165 4.165 16 C -0.161 4.161 17 H 0.129 0.871 18 C 0.317 3.683 19 N -0.416 5.416 20 O -0.411 6.411 21 C -0.175 4.175 22 N -0.132 5.132 23 H 0.106 0.894 24 H 0.106 0.894 25 H 0.120 0.880 26 H 0.130 0.870 27 H 0.222 0.778 28 H -0.180 1.180 29 H -0.185 1.185 30 H 0.085 0.915 31 H 0.100 0.900 32 H 0.094 0.906 33 H 0.227 0.773 34 H 0.111 0.889 35 H 0.113 0.887 36 H 0.231 0.769 37 H 0.235 0.765 38 H 0.115 0.885 39 H 0.097 0.903 40 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -6.308 -5.429 -2.687 8.746 hybrid contribution 0.660 -0.948 -1.137 1.621 sum -5.648 -6.377 -3.824 9.337 Atomic orbital electron populations 1.20414 0.87610 1.03700 1.04126 1.20147 0.93390 0.85764 1.05958 1.19551 0.92948 0.94846 1.14414 1.24255 1.01103 0.86830 1.02274 1.86553 1.60985 1.57032 1.28778 0.95564 0.82229 0.83663 0.83074 1.19805 0.94868 0.90684 0.99477 1.20571 0.93864 0.98576 1.02766 1.20117 0.82723 0.94139 1.20898 1.17067 0.87583 0.81338 0.76040 1.90855 1.24193 1.74876 1.49574 1.45853 1.09307 1.05777 1.76493 1.22640 0.90208 0.88953 0.96061 0.85862 1.23242 0.99690 0.93975 0.99638 1.22227 0.92673 1.00836 1.00408 0.87100 1.20056 0.87891 0.76133 0.84245 1.43820 1.11493 1.67752 1.18506 1.90789 1.80317 1.47548 1.22448 1.23438 1.02863 0.93832 0.97391 1.41729 1.05305 1.08190 1.57957 0.89415 0.89421 0.88033 0.87014 0.77809 1.18016 1.18545 0.91519 0.90026 0.90598 0.77293 0.88877 0.88750 0.76901 0.76454 0.88469 0.90275 0.74716 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.52 8.21 36.00 0.30 0.81 16 2 C 0.07 -0.09 6.84 -81.95 -0.56 -0.65 16 3 C -0.21 -0.24 5.38 -105.02 -0.57 -0.81 16 4 C -0.03 -0.02 3.03 36.01 0.11 0.09 16 5 O -0.53 -1.11 10.20 -35.23 -0.36 -1.47 16 6 Si 0.65 -0.55 26.76 -169.99 -4.55 -5.10 16 7 C -0.04 -0.13 6.15 -104.16 -0.64 -0.77 16 8 C -0.10 -0.39 9.52 36.01 0.34 -0.05 16 9 C -0.07 -0.13 7.06 -81.98 -0.58 -0.71 16 10 C 0.59 1.84 7.79 -12.86 -0.10 1.74 16 11 O -0.52 -3.66 14.39 5.19 0.07 -3.59 16 12 N -0.72 0.36 5.35 -54.32 -0.29 0.07 16 13 C 0.13 0.04 3.89 -67.11 -0.26 -0.23 16 14 H 0.12 0.48 7.39 -51.93 -0.38 0.10 16 15 C -0.13 0.19 7.20 -25.92 -0.19 0.00 16 16 C -0.14 0.29 4.34 -90.96 -0.40 -0.11 16 17 H 0.11 -0.49 8.14 -51.93 -0.42 -0.92 16 18 C 0.53 0.46 7.36 -10.98 -0.08 0.38 16 19 N -0.85 2.00 8.87 31.22 0.28 2.28 16 20 O -0.54 -3.01 16.58 5.56 0.09 -2.92 16 21 C -0.14 0.27 7.46 -25.92 -0.19 0.07 16 22 N -0.53 0.90 5.99 -5.70 -0.03 0.86 16 23 H 0.09 -0.49 7.13 -51.93 -0.37 -0.86 16 24 H 0.09 -0.60 8.14 -51.93 -0.42 -1.02 16 25 H 0.10 -0.62 5.18 -51.93 -0.27 -0.89 16 26 H 0.11 0.02 7.96 -51.93 -0.41 -0.39 16 27 H 0.37 -0.08 8.48 45.56 0.39 0.30 16 28 H -0.25 -0.68 7.11 56.52 0.40 -0.27 16 29 H -0.26 -0.42 7.11 56.52 0.40 -0.02 16 30 H 0.07 0.29 8.14 -51.93 -0.42 -0.13 16 31 H 0.08 0.25 5.48 -51.93 -0.28 -0.04 16 32 H 0.08 0.40 6.47 -51.93 -0.34 0.06 16 33 H 0.39 -1.52 7.86 -40.82 -0.32 -1.84 16 34 H 0.09 0.07 7.43 -51.93 -0.39 -0.32 16 35 H 0.09 -0.38 8.12 -51.93 -0.42 -0.80 16 36 H 0.40 -2.14 8.83 -40.82 -0.36 -2.50 16 37 H 0.40 -1.04 8.93 -40.82 -0.36 -1.40 16 38 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 39 H 0.08 -0.08 8.09 -51.93 -0.42 -0.50 16 40 H 0.42 -2.16 8.19 -40.82 -0.33 -2.50 16 LS Contribution 324.71 15.07 4.89 4.89 Total: 0.00 -12.04 324.71 -7.88 -19.92 By element: Atomic # 1 Polarization: -9.55 SS G_CDS: -5.17 Total: -14.72 kcal Atomic # 6 Polarization: 2.59 SS G_CDS: -2.81 Total: -0.23 kcal Atomic # 7 Polarization: 3.26 SS G_CDS: -0.05 Total: 3.22 kcal Atomic # 8 Polarization: -7.79 SS G_CDS: -0.19 Total: -7.98 kcal Atomic # 14 Polarization: -0.55 SS G_CDS: -4.55 Total: -5.10 kcal Total LS contribution 4.89 Total: 4.89 kcal Total: -12.04 -7.88 -19.92 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_12297754.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.679 kcal (2) G-P(sol) polarization free energy of solvation -12.045 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.723 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.876 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.920 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.599 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds