Wall clock time and date at job start Thu Mar 4 2021 13:18:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35650 * 117.00630 * 2 1 4 4 C 1.38414 * 120.11625 * 0.28016 * 3 2 1 5 5 C 1.38729 * 120.03037 * 180.25684 * 4 3 2 6 6 O 1.35714 * 119.86322 * 179.76277 * 5 4 3 7 7 C 1.42903 * 116.99772 * 359.97438 * 6 5 4 8 8 C 1.39143 * 120.27269 * 359.73882 * 5 4 3 9 9 C 1.50696 * 119.87733 * 180.02562 * 8 5 4 10 10 O 1.42908 * 109.47331 * 74.97817 * 9 8 5 11 11 Si 1.86302 * 109.47028 * 194.97540 * 9 8 5 12 12 C 1.37587 * 120.24215 * 359.97438 * 8 5 4 13 13 C 1.39815 * 119.96231 * 0.02562 * 12 8 5 14 14 C 1.47301 * 120.13238 * 179.97438 * 13 12 8 15 15 O 1.21629 * 119.99965 * 179.97438 * 14 13 12 16 16 N 1.34773 * 120.00329 * 0.02562 * 14 13 12 17 17 C 1.46501 * 120.00122 * 179.97438 * 16 14 13 18 18 H 1.08993 * 112.90929 * 336.25213 * 17 16 14 19 19 C 1.53962 * 113.66387 * 107.55425 * 17 16 14 20 20 C 1.53782 * 87.11063 * 139.88885 * 19 17 16 21 21 H 1.09004 * 113.68975 * 220.07786 * 20 19 17 22 22 C 1.50700 * 113.61177 * 89.18654 * 20 19 17 23 23 N 1.34777 * 119.99741 * 82.50351 * 22 20 19 24 24 O 1.21282 * 119.99993 * 262.49631 * 22 20 19 25 25 C 1.53781 * 87.08260 * 334.63747 * 20 19 17 26 26 H 1.09003 * 109.47297 * 300.00187 * 1 2 3 27 27 H 1.09002 * 109.47048 * 60.00222 * 1 2 3 28 28 H 1.09003 * 109.47565 * 179.97438 * 1 2 3 29 29 H 1.07995 * 119.98175 * 359.97438 * 4 3 2 30 30 H 1.09001 * 109.47390 * 60.00122 * 7 6 5 31 31 H 1.09005 * 109.46950 * 180.02562 * 7 6 5 32 32 H 1.09003 * 109.47230 * 299.99733 * 7 6 5 33 33 H 1.08997 * 109.47224 * 314.97520 * 9 8 5 34 34 H 0.96695 * 113.99469 * 299.99461 * 10 9 8 35 35 H 1.48502 * 110.00200 * 298.67838 * 11 9 8 36 36 H 1.48494 * 110.00038 * 60.00168 * 11 9 8 37 37 H 1.07995 * 120.01622 * 180.02562 * 12 8 5 38 38 H 0.97002 * 120.00080 * 0.02562 * 16 14 13 39 39 H 1.08997 * 113.53543 * 25.33559 * 19 17 16 40 40 H 1.08998 * 113.73879 * 254.47157 * 19 17 16 41 41 H 0.97003 * 120.00258 * 359.97438 * 23 22 20 42 42 H 0.97003 * 120.00057 * 179.97438 * 23 22 20 43 43 H 1.09002 * 113.61445 * 139.98212 * 25 20 19 44 44 H 1.09002 * 113.61408 * 270.79943 * 25 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2086 0.0000 4 6 1.2936 2.3710 0.0059 5 6 1.9253 3.6061 0.0005 6 8 1.1853 4.7437 0.0014 7 6 -0.2358 4.5931 0.0074 8 6 3.3146 3.6833 -0.0054 9 6 3.9916 5.0296 -0.0106 10 8 3.8990 5.6145 1.2900 11 14 5.7847 4.8213 -0.4714 12 6 4.0725 2.5350 -0.0053 13 6 3.4462 1.2850 0.0001 14 6 4.2539 0.0532 -0.0003 15 8 3.7065 -1.0330 0.0048 16 7 5.5994 0.1296 -0.0055 17 6 6.4027 -1.0956 -0.0054 18 1 5.8684 -1.9532 0.4031 19 6 7.0923 -1.3825 -1.3517 20 6 8.3203 -1.8265 -0.5394 21 1 9.2691 -1.5051 -0.9690 22 6 8.3075 -3.2893 -0.1770 23 7 8.7283 -4.2081 -1.0688 24 8 7.9187 -3.6396 0.9171 25 6 7.8106 -0.9090 0.5845 26 1 -0.3634 0.5139 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 0.2150 2.3165 0.0100 30 1 -0.5394 4.0456 0.8997 31 1 -0.7054 5.5769 0.0070 32 1 -0.5466 4.0423 -0.8803 33 1 3.5030 5.6792 -0.7368 34 1 2.9920 5.7525 1.5954 35 1 6.4698 3.9635 0.5286 36 1 5.8947 4.2139 -1.8220 37 1 5.1505 2.5992 -0.0094 38 1 6.0360 0.9958 -0.0085 39 1 7.2652 -0.4888 -1.9513 40 1 6.6288 -2.1896 -1.9189 41 1 9.0391 -3.9279 -1.9439 42 1 8.7205 -5.1496 -0.8354 43 1 7.9262 -1.3342 1.5815 44 1 8.1812 0.1137 0.5150 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_12297780.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:18:39 Heat of formation + Delta-G solvation = -124.371040 kcal Electronic energy + Delta-G solvation = -29879.229667 eV Core-core repulsion = 25571.945476 eV Total energy + Delta-G solvation = -4307.284191 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.145 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.28922 -41.67180 -40.54446 -39.95620 -38.52379 -38.27724 -37.03387 -34.85852 -34.48536 -32.33539 -31.81874 -29.06639 -28.37249 -27.10396 -26.80552 -26.11085 -24.70750 -23.30873 -22.51601 -21.69346 -20.48567 -20.06622 -18.78890 -18.69320 -18.23966 -18.07531 -17.73661 -17.37674 -17.26632 -16.94808 -16.68327 -16.46300 -16.12333 -15.98018 -15.83877 -15.63046 -15.42190 -15.32617 -14.52097 -14.33091 -14.26636 -13.96967 -13.71990 -13.59190 -13.44968 -13.30808 -13.11126 -12.70351 -12.61628 -12.60311 -12.17529 -11.91486 -11.78193 -11.73560 -11.38321 -11.17814 -11.04427 -10.90225 -10.72850 -10.24174 -10.05002 -9.31742 -4.77533 -0.43005 -0.05723 1.38534 1.49869 1.56071 1.70359 1.94064 1.96914 1.97600 2.06730 2.44668 2.50074 3.28265 3.31895 3.35887 3.42937 3.55173 3.63534 3.69047 3.82947 3.94662 3.97242 4.04382 4.13178 4.20136 4.21497 4.23361 4.27186 4.38448 4.48459 4.55610 4.61011 4.62761 4.64967 4.73223 4.78935 4.81513 4.90839 4.93024 5.02370 5.14090 5.40576 5.81709 5.89938 6.16141 6.36000 6.40141 6.64410 7.07692 7.27907 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.306 6.306 3 C 0.216 3.784 4 C -0.304 4.304 5 C 0.211 3.789 6 O -0.310 6.310 7 C 0.011 3.989 8 C -0.199 4.199 9 C -0.081 4.081 10 O -0.546 6.546 11 Si 0.794 3.206 12 C -0.011 4.011 13 C -0.230 4.230 14 C 0.560 3.440 15 O -0.564 6.564 16 N -0.709 5.709 17 C 0.109 3.891 18 H 0.079 0.921 19 C -0.122 4.122 20 C -0.127 4.127 21 H 0.151 0.849 22 C 0.523 3.477 23 N -0.835 5.835 24 O -0.594 6.594 25 C -0.123 4.123 26 H 0.073 0.927 27 H 0.075 0.925 28 H 0.113 0.887 29 H 0.170 0.830 30 H 0.069 0.931 31 H 0.128 0.872 32 H 0.068 0.932 33 H 0.085 0.915 34 H 0.373 0.627 35 H -0.270 1.270 36 H -0.256 1.256 37 H 0.146 0.854 38 H 0.408 0.592 39 H 0.124 0.876 40 H 0.071 0.929 41 H 0.420 0.580 42 H 0.406 0.594 43 H 0.068 0.932 44 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.364 7.354 -6.170 9.607 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.217 6.217 3 C 0.166 3.834 4 C -0.323 4.323 5 C 0.163 3.837 6 O -0.222 6.222 7 C -0.082 4.082 8 C -0.200 4.200 9 C -0.188 4.188 10 O -0.353 6.353 11 Si 0.693 3.307 12 C -0.029 4.029 13 C -0.234 4.234 14 C 0.349 3.651 15 O -0.443 6.443 16 N -0.361 5.361 17 C 0.004 3.996 18 H 0.097 0.903 19 C -0.161 4.161 20 C -0.148 4.148 21 H 0.169 0.831 22 C 0.308 3.692 23 N -0.399 5.399 24 O -0.475 6.475 25 C -0.161 4.161 26 H 0.092 0.908 27 H 0.094 0.906 28 H 0.131 0.869 29 H 0.187 0.813 30 H 0.088 0.912 31 H 0.146 0.854 32 H 0.087 0.913 33 H 0.103 0.897 34 H 0.221 0.779 35 H -0.196 1.196 36 H -0.181 1.181 37 H 0.163 0.837 38 H 0.246 0.754 39 H 0.143 0.857 40 H 0.089 0.911 41 H 0.251 0.749 42 H 0.237 0.763 43 H 0.086 0.914 44 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 1.066 5.956 -5.710 8.320 hybrid contribution -2.068 -1.093 0.172 2.345 sum -1.002 4.863 -5.538 7.438 Atomic orbital electron populations 1.23514 0.76217 1.05900 1.02865 1.86371 1.23511 1.25861 1.85979 1.18962 0.90820 0.85060 0.88531 1.21473 1.02197 0.90561 1.18087 1.18816 0.90427 0.85312 0.89117 1.86047 1.21466 1.28004 1.86653 1.23534 0.75646 1.06367 1.02701 1.19710 0.91026 0.97177 1.12078 1.25394 1.15066 0.89710 0.88612 1.86678 1.33011 1.83132 1.32448 0.92311 0.73883 0.87232 0.77246 1.20858 0.99494 0.89769 0.92795 1.19182 0.91295 0.93570 1.19367 1.18191 0.82773 0.88476 0.75686 1.90815 1.72347 1.30306 1.50881 1.45797 1.05138 1.09994 1.75196 1.22672 0.90832 0.87513 0.98568 0.90281 1.23440 0.93424 1.03213 0.96033 1.22204 1.02708 0.90246 0.99661 0.83093 1.20636 0.75308 0.89430 0.83782 1.43728 1.67075 1.10286 1.18766 1.90762 1.49009 1.82833 1.24859 1.23288 0.92784 1.01302 0.98734 0.90846 0.90642 0.86900 0.81255 0.91225 0.85430 0.91296 0.89690 0.77866 1.19644 1.18106 0.83655 0.75419 0.85736 0.91063 0.74874 0.76308 0.91355 0.85583 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.00 9.81 113.37 1.11 1.11 16 2 O -0.31 -3.42 8.56 -68.68 -0.59 -4.01 16 3 C 0.22 1.95 6.70 22.82 0.15 2.11 16 4 C -0.30 -0.82 8.01 22.43 0.18 -0.64 16 5 C 0.21 0.52 6.62 22.60 0.15 0.67 16 6 O -0.31 0.41 9.35 -90.35 -0.85 -0.44 16 7 C 0.01 -0.09 9.80 113.37 1.11 1.02 16 8 C -0.20 -0.73 5.27 -19.80 -0.10 -0.83 16 9 C -0.08 -0.03 2.32 71.23 0.17 0.13 16 10 O -0.55 -1.15 12.65 -148.98 -1.89 -3.03 16 11 Si 0.79 -2.25 30.40 68.60 2.09 -0.17 16 12 C -0.01 -0.06 8.14 22.50 0.18 0.13 16 13 C -0.23 -2.28 5.89 -20.00 -0.12 -2.40 16 14 C 0.56 7.54 7.76 86.63 0.67 8.21 16 15 O -0.56 -12.42 14.75 16.84 0.25 -12.17 16 16 N -0.71 -4.37 5.31 -443.12 -2.35 -6.72 16 17 C 0.11 0.68 3.90 45.58 0.18 0.86 16 18 H 0.08 1.22 7.40 -2.39 -0.02 1.21 16 19 C -0.12 0.13 7.47 31.18 0.23 0.37 16 20 C -0.13 0.28 4.34 -11.01 -0.05 0.23 16 21 H 0.15 -1.48 8.14 -2.38 -0.02 -1.50 16 22 C 0.52 2.40 7.36 87.66 0.65 3.04 16 23 N -0.84 2.66 8.87 -173.53 -1.54 1.12 16 24 O -0.59 -9.45 16.59 -3.04 -0.05 -9.50 16 25 C -0.12 -0.12 7.20 31.12 0.22 0.10 16 26 H 0.07 -0.24 7.65 -2.39 -0.02 -0.26 16 27 H 0.08 -0.29 7.67 -2.39 -0.02 -0.31 16 28 H 0.11 -0.16 8.14 -2.39 -0.02 -0.18 16 29 H 0.17 -0.57 4.50 -2.91 -0.01 -0.59 16 30 H 0.07 -0.64 7.65 -2.39 -0.02 -0.66 16 31 H 0.13 -1.48 8.14 -2.38 -0.02 -1.50 16 32 H 0.07 -0.64 7.65 -2.39 -0.02 -0.66 16 33 H 0.09 -0.14 7.82 -2.39 -0.02 -0.16 16 34 H 0.37 -0.58 8.58 -74.06 -0.64 -1.22 16 35 H -0.27 -0.11 6.80 99.48 0.68 0.57 16 36 H -0.26 0.30 7.11 99.48 0.71 1.01 16 37 H 0.15 0.20 3.24 -2.91 -0.01 0.19 16 38 H 0.41 0.06 6.74 -92.71 -0.63 -0.57 16 39 H 0.12 -0.76 8.14 -2.39 -0.02 -0.78 16 40 H 0.07 0.06 8.09 -2.39 -0.02 0.04 16 41 H 0.42 -4.33 8.83 -92.71 -0.82 -5.14 16 42 H 0.41 -1.35 8.93 -92.71 -0.83 -2.18 16 43 H 0.07 0.45 7.43 -2.39 -0.02 0.44 16 44 H 0.13 -0.69 8.12 -2.39 -0.02 -0.71 16 Total: 0.00 -31.80 363.85 -1.98 -33.78 By element: Atomic # 1 Polarization: -11.19 SS G_CDS: -1.79 Total: -12.98 kcal Atomic # 6 Polarization: 9.39 SS G_CDS: 4.74 Total: 14.12 kcal Atomic # 7 Polarization: -1.71 SS G_CDS: -3.89 Total: -5.60 kcal Atomic # 8 Polarization: -26.03 SS G_CDS: -3.12 Total: -29.15 kcal Atomic # 14 Polarization: -2.25 SS G_CDS: 2.09 Total: -0.17 kcal Total: -31.80 -1.98 -33.78 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_12297780.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -90.595 kcal (2) G-P(sol) polarization free energy of solvation -31.796 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.391 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.980 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.776 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.371 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds