Wall clock time and date at job start Thu Mar 4 2021 13:18:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34772 * 1 3 3 O 1.21282 * 120.00133 * 2 1 4 4 C 1.50703 * 119.99754 * 180.02562 * 2 1 3 5 5 H 1.09001 * 112.84458 * 311.19153 * 4 2 1 6 6 C 1.53777 * 113.61802 * 82.49878 * 4 2 1 7 7 C 1.53779 * 87.08255 * 139.98036 * 6 4 2 8 8 H 1.08997 * 113.69458 * 220.00811 * 7 6 4 9 9 N 1.46501 * 113.61332 * 89.11667 * 7 6 4 10 10 C 1.34775 * 120.00151 * 107.50341 * 9 7 6 11 11 O 1.21286 * 119.99791 * 0.02562 * 10 9 7 12 12 C 1.50698 * 120.00257 * 179.97438 * 10 9 7 13 13 C 1.50699 * 109.47356 * 180.02562 * 12 10 9 14 14 C 1.38229 * 119.99969 * 89.99957 * 13 12 10 15 15 C 1.38239 * 120.00334 * 180.02562 * 14 13 12 16 16 C 1.38237 * 119.99584 * 359.96091 * 15 14 13 17 17 C 1.50699 * 119.99948 * 180.02562 * 16 15 14 18 18 O 1.42905 * 109.46972 * 64.99974 * 17 16 15 19 19 Si 1.86295 * 109.47097 * 184.99614 * 17 16 15 20 20 C 1.38236 * 120.00213 * 0.26890 * 16 15 14 21 21 C 1.38235 * 119.99802 * 269.98290 * 13 12 10 22 22 C 1.53781 * 113.61229 * 179.97438 * 4 2 1 23 23 H 0.96994 * 120.00564 * 179.97438 * 1 2 3 24 24 H 0.97001 * 120.00086 * 359.97438 * 1 2 3 25 25 H 1.09000 * 113.61526 * 25.43437 * 6 4 2 26 26 H 1.09003 * 113.61714 * 254.53018 * 6 4 2 27 27 H 0.97004 * 119.99546 * 287.50261 * 9 7 6 28 28 H 1.09001 * 109.47104 * 60.00192 * 12 10 9 29 29 H 1.09005 * 109.47083 * 300.00288 * 12 10 9 30 30 H 1.08005 * 120.00219 * 359.97438 * 14 13 12 31 31 H 1.07994 * 120.00273 * 179.97438 * 15 14 13 32 32 H 1.09000 * 109.47247 * 304.99910 * 17 16 15 33 33 H 0.96696 * 114.00036 * 179.97438 * 18 17 16 34 34 H 1.48496 * 110.00262 * 300.00047 * 19 17 16 35 35 H 1.48497 * 109.99780 * 61.32038 * 19 17 16 36 36 H 1.07991 * 120.00435 * 179.72655 * 20 16 15 37 37 H 1.07999 * 120.00236 * 359.97438 * 21 13 12 38 38 H 1.09008 * 113.61530 * 105.46885 * 22 4 2 39 39 H 1.08996 * 113.61313 * 334.56358 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3052 -0.0006 5 1 1.7398 -2.0027 0.7550 6 6 2.2499 -1.9301 -1.3978 7 6 3.6824 -2.3114 -0.9886 8 1 4.4149 -2.1804 -1.7850 9 7 3.7779 -3.6202 -0.3374 10 6 4.3236 -4.6621 -0.9955 11 8 4.7360 -4.5160 -2.1267 12 6 4.4224 -6.0084 -0.3255 13 6 5.0664 -6.9924 -1.2677 14 6 6.4397 -7.1504 -1.2695 15 6 7.0306 -8.0527 -2.1342 16 6 6.2480 -8.7976 -2.9966 17 6 6.8920 -9.7817 -3.9388 18 8 7.5089 -10.8281 -3.1861 19 14 5.5943 -10.5066 -5.0618 20 6 4.8751 -8.6362 -2.9981 21 6 4.2838 -7.7373 -2.1300 22 6 3.6295 -1.1341 -0.0011 23 1 -0.4851 -0.8399 -0.0004 24 1 -0.4850 0.8400 0.0004 25 1 2.2064 -1.2026 -2.2083 26 1 1.5998 -2.7892 -1.5634 27 1 3.4484 -3.7369 0.5675 28 1 3.4239 -6.3572 -0.0620 29 1 5.0270 -5.9213 0.5774 30 1 7.0511 -6.5683 -0.5959 31 1 8.1035 -8.1759 -2.1359 32 1 7.6465 -9.2713 -4.5374 33 1 7.9440 -11.4995 -3.7293 34 1 4.5597 -11.2055 -4.2578 35 1 4.9673 -9.4325 -5.8731 36 1 4.2641 -9.2149 -3.6749 37 1 3.2109 -7.6144 -2.1282 38 1 4.0934 -1.3505 0.9612 39 1 3.9629 -0.1892 -0.4300 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_12335836.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:18:45 Heat of formation + Delta-G solvation = -54.467075 kcal Electronic energy + Delta-G solvation = -22262.278107 eV Core-core repulsion = 18750.927182 eV Total energy + Delta-G solvation = -3511.350925 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.130 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.78435 -40.88038 -39.99140 -38.51655 -37.54759 -34.70983 -34.40173 -33.93387 -31.94448 -29.95724 -27.41990 -26.88801 -25.58459 -23.83431 -22.65659 -22.08142 -21.39032 -20.36120 -18.76513 -18.37560 -18.11452 -17.72967 -17.59807 -16.98981 -16.90143 -16.33288 -16.07044 -15.94143 -15.46924 -15.12044 -14.99827 -14.72405 -14.55219 -14.35569 -13.77115 -13.74193 -13.54795 -13.47673 -13.04485 -12.98388 -12.86710 -12.18637 -11.93609 -11.87480 -11.80870 -11.72830 -10.94616 -10.89229 -10.73517 -10.30366 -10.15833 -9.84732 -9.58860 -4.94982 0.24866 0.47889 1.30960 1.54339 1.59786 1.67128 1.99483 2.00319 2.48341 2.74786 3.24518 3.32180 3.42598 3.55784 3.61660 3.72650 3.76932 3.88629 3.92972 4.02306 4.04764 4.17344 4.34867 4.43205 4.44460 4.48476 4.58730 4.68799 4.70786 4.72147 4.79142 4.96259 5.00531 5.07466 5.37924 5.45938 5.56265 5.58357 5.72989 6.00059 6.26767 6.37620 6.63874 7.16529 7.22215 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.855 5.855 2 C 0.526 3.474 3 O -0.540 6.540 4 C -0.142 4.142 5 H 0.114 0.886 6 C -0.133 4.133 7 C 0.120 3.880 8 H 0.110 0.890 9 N -0.717 5.717 10 C 0.517 3.483 11 O -0.523 6.523 12 C -0.102 4.102 13 C -0.064 4.064 14 C -0.102 4.102 15 C -0.088 4.088 16 C -0.073 4.073 17 C -0.072 4.072 18 O -0.546 6.546 19 Si 0.682 3.318 20 C -0.122 4.122 21 C -0.098 4.098 22 C -0.122 4.122 23 H 0.402 0.598 24 H 0.402 0.598 25 H 0.097 0.903 26 H 0.080 0.920 27 H 0.402 0.598 28 H 0.106 0.894 29 H 0.107 0.893 30 H 0.125 0.875 31 H 0.128 0.872 32 H 0.074 0.926 33 H 0.382 0.618 34 H -0.251 1.251 35 H -0.255 1.255 36 H 0.118 0.882 37 H 0.124 0.876 38 H 0.081 0.919 39 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.414 -3.900 1.573 4.849 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.418 5.418 2 C 0.310 3.690 3 O -0.416 6.416 4 C -0.163 4.163 5 H 0.131 0.869 6 C -0.172 4.172 7 C 0.014 3.986 8 H 0.128 0.872 9 N -0.369 5.369 10 C 0.303 3.697 11 O -0.398 6.398 12 C -0.142 4.142 13 C -0.065 4.065 14 C -0.120 4.120 15 C -0.106 4.106 16 C -0.073 4.073 17 C -0.183 4.183 18 O -0.352 6.352 19 Si 0.584 3.416 20 C -0.139 4.139 21 C -0.116 4.116 22 C -0.160 4.160 23 H 0.230 0.770 24 H 0.233 0.767 25 H 0.115 0.885 26 H 0.099 0.901 27 H 0.236 0.764 28 H 0.124 0.876 29 H 0.125 0.875 30 H 0.143 0.857 31 H 0.146 0.854 32 H 0.092 0.908 33 H 0.229 0.771 34 H -0.176 1.176 35 H -0.180 1.180 36 H 0.135 0.865 37 H 0.142 0.858 38 H 0.099 0.901 39 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -2.627 -2.877 1.012 4.026 hybrid contribution -0.692 0.376 0.881 1.182 sum -3.320 -2.501 1.893 4.567 Atomic orbital electron populations 1.43912 1.07329 1.12640 1.77913 1.20465 0.82581 0.91142 0.74769 1.90771 1.68223 1.33496 1.49123 1.22862 0.97428 0.95453 1.00566 0.86851 1.23358 0.97849 1.00914 0.95117 1.21808 0.97763 0.82235 0.96747 0.87222 1.45708 1.63304 1.09328 1.18546 1.20607 0.76931 0.85619 0.86523 1.90770 1.46598 1.84166 1.18246 1.20684 1.03604 0.91174 0.98756 1.19235 0.93714 0.96418 0.97108 1.21027 0.93942 0.97949 0.99053 1.20956 1.00124 0.94893 0.94592 1.19332 0.93093 0.97151 0.97760 1.24696 1.04386 0.90931 0.98264 1.86489 1.75085 1.37080 1.36537 0.95437 0.79391 0.85133 0.81651 1.20820 0.93988 0.99613 0.99482 1.20845 0.99700 0.95879 0.95207 1.23241 0.92946 0.99293 1.00544 0.77000 0.76720 0.88492 0.90109 0.76389 0.87628 0.87480 0.85705 0.85429 0.90796 0.77075 1.17582 1.17976 0.86505 0.85847 0.90077 0.87103 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 2.24 8.87 31.22 0.28 2.52 16 2 C 0.53 0.27 7.63 -10.99 -0.08 0.19 16 3 O -0.54 -2.87 16.74 5.56 0.09 -2.77 16 4 C -0.14 0.32 4.03 -90.96 -0.37 -0.05 16 5 H 0.11 -0.53 8.14 -51.93 -0.42 -0.95 16 6 C -0.13 0.24 7.43 -25.92 -0.19 0.05 16 7 C 0.12 -0.11 4.32 -67.14 -0.29 -0.40 16 8 H 0.11 0.14 7.46 -51.93 -0.39 -0.24 16 9 N -0.72 1.48 5.26 -53.04 -0.28 1.20 16 10 C 0.52 0.37 7.82 -10.99 -0.09 0.29 16 11 O -0.52 -2.89 15.63 5.55 0.09 -2.81 16 12 C -0.10 0.16 5.83 -29.04 -0.17 -0.01 16 13 C -0.06 -0.12 4.37 -104.63 -0.46 -0.57 16 14 C -0.10 -0.23 9.70 -39.58 -0.38 -0.61 16 15 C -0.09 -0.27 9.69 -39.58 -0.38 -0.65 16 16 C -0.07 -0.26 5.38 -104.62 -0.56 -0.82 16 17 C -0.07 -0.07 2.79 36.01 0.10 0.03 16 18 O -0.55 -0.49 12.81 -35.23 -0.45 -0.94 16 19 Si 0.68 -0.10 29.84 -169.99 -5.07 -5.17 16 20 C -0.12 -0.44 8.67 -39.58 -0.34 -0.78 16 21 C -0.10 -0.25 9.70 -39.58 -0.38 -0.64 16 22 C -0.12 0.15 7.15 -25.94 -0.19 -0.03 16 23 H 0.40 -2.20 8.83 -40.82 -0.36 -2.56 16 24 H 0.40 -1.13 8.93 -40.82 -0.36 -1.49 16 25 H 0.10 -0.09 8.09 -51.93 -0.42 -0.51 16 26 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 27 H 0.40 -2.03 8.70 -40.82 -0.36 -2.38 16 28 H 0.11 -0.40 8.09 -51.93 -0.42 -0.82 16 29 H 0.11 -0.39 8.09 -51.93 -0.42 -0.81 16 30 H 0.12 0.03 8.06 -52.48 -0.42 -0.39 16 31 H 0.13 0.22 8.06 -52.49 -0.42 -0.20 16 32 H 0.07 -0.03 7.96 -51.93 -0.41 -0.45 16 33 H 0.38 -1.62 8.74 45.56 0.40 -1.22 16 34 H -0.25 -0.69 7.05 56.52 0.40 -0.29 16 35 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 36 H 0.12 0.35 4.87 -52.49 -0.26 0.09 16 37 H 0.12 0.07 8.06 -52.49 -0.42 -0.35 16 38 H 0.08 -0.17 8.14 -51.92 -0.42 -0.60 16 39 H 0.11 0.06 7.43 -51.93 -0.39 -0.32 16 LS Contribution 333.63 15.07 5.03 5.03 Total: 0.00 -12.12 333.63 -9.23 -21.35 By element: Atomic # 1 Polarization: -9.26 SS G_CDS: -5.12 Total: -14.38 kcal Atomic # 6 Polarization: -0.23 SS G_CDS: -3.79 Total: -4.02 kcal Atomic # 7 Polarization: 3.72 SS G_CDS: 0.00 Total: 3.71 kcal Atomic # 8 Polarization: -6.25 SS G_CDS: -0.27 Total: -6.52 kcal Atomic # 14 Polarization: -0.10 SS G_CDS: -5.07 Total: -5.17 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -12.12 -9.23 -21.35 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_12335836.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.122 kcal (2) G-P(sol) polarization free energy of solvation -12.116 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.238 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.229 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.345 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.467 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds