Wall clock time and date at job start Thu Mar 4 2021 13:18:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34772 * 1 3 3 O 1.21282 * 120.00133 * 2 1 4 4 C 1.50703 * 119.99754 * 180.02562 * 2 1 3 5 5 H 1.09001 * 112.84458 * 311.19153 * 4 2 1 6 6 C 1.53777 * 113.61802 * 82.49878 * 4 2 1 7 7 C 1.53779 * 87.08255 * 139.98036 * 6 4 2 8 8 H 1.08997 * 113.69458 * 220.00811 * 7 6 4 9 9 N 1.46501 * 113.61332 * 89.11667 * 7 6 4 10 10 C 1.34775 * 120.00151 * 107.50341 * 9 7 6 11 11 O 1.21286 * 119.99791 * 0.02562 * 10 9 7 12 12 C 1.50698 * 120.00257 * 179.97438 * 10 9 7 13 13 C 1.50699 * 109.47356 * 180.02562 * 12 10 9 14 14 C 1.38229 * 119.99969 * 89.99957 * 13 12 10 15 15 C 1.38239 * 120.00334 * 180.02562 * 14 13 12 16 16 C 1.38237 * 119.99584 * 359.96091 * 15 14 13 17 17 C 1.50699 * 119.99948 * 180.02562 * 16 15 14 18 18 O 1.42905 * 109.46972 * 64.99974 * 17 16 15 19 19 Si 1.86295 * 109.47097 * 184.99614 * 17 16 15 20 20 C 1.38236 * 120.00213 * 0.26890 * 16 15 14 21 21 C 1.38235 * 119.99802 * 269.98290 * 13 12 10 22 22 C 1.53781 * 113.61229 * 179.97438 * 4 2 1 23 23 H 0.96994 * 120.00564 * 179.97438 * 1 2 3 24 24 H 0.97001 * 120.00086 * 359.97438 * 1 2 3 25 25 H 1.09000 * 113.61526 * 25.43437 * 6 4 2 26 26 H 1.09003 * 113.61714 * 254.53018 * 6 4 2 27 27 H 0.97004 * 119.99546 * 287.50261 * 9 7 6 28 28 H 1.09001 * 109.47104 * 60.00192 * 12 10 9 29 29 H 1.09005 * 109.47083 * 300.00288 * 12 10 9 30 30 H 1.08005 * 120.00219 * 359.97438 * 14 13 12 31 31 H 1.07994 * 120.00273 * 179.97438 * 15 14 13 32 32 H 1.09000 * 109.47247 * 304.99910 * 17 16 15 33 33 H 0.96696 * 114.00036 * 179.97438 * 18 17 16 34 34 H 1.48496 * 110.00262 * 300.00047 * 19 17 16 35 35 H 1.48497 * 109.99780 * 61.32038 * 19 17 16 36 36 H 1.07991 * 120.00435 * 179.72655 * 20 16 15 37 37 H 1.07999 * 120.00236 * 359.97438 * 21 13 12 38 38 H 1.09008 * 113.61530 * 105.46885 * 22 4 2 39 39 H 1.08996 * 113.61313 * 334.56358 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3052 -0.0006 5 1 1.7398 -2.0027 0.7550 6 6 2.2499 -1.9301 -1.3978 7 6 3.6824 -2.3114 -0.9886 8 1 4.4149 -2.1804 -1.7850 9 7 3.7779 -3.6202 -0.3374 10 6 4.3236 -4.6621 -0.9955 11 8 4.7360 -4.5160 -2.1267 12 6 4.4224 -6.0084 -0.3255 13 6 5.0664 -6.9924 -1.2677 14 6 6.4397 -7.1504 -1.2695 15 6 7.0306 -8.0527 -2.1342 16 6 6.2480 -8.7976 -2.9966 17 6 6.8920 -9.7817 -3.9388 18 8 7.5089 -10.8281 -3.1861 19 14 5.5943 -10.5066 -5.0618 20 6 4.8751 -8.6362 -2.9981 21 6 4.2838 -7.7373 -2.1300 22 6 3.6295 -1.1341 -0.0011 23 1 -0.4851 -0.8399 -0.0004 24 1 -0.4850 0.8400 0.0004 25 1 2.2064 -1.2026 -2.2083 26 1 1.5998 -2.7892 -1.5634 27 1 3.4484 -3.7369 0.5675 28 1 3.4239 -6.3572 -0.0620 29 1 5.0270 -5.9213 0.5774 30 1 7.0511 -6.5683 -0.5959 31 1 8.1035 -8.1759 -2.1359 32 1 7.6465 -9.2713 -4.5374 33 1 7.9440 -11.4995 -3.7293 34 1 4.5597 -11.2055 -4.2578 35 1 4.9673 -9.4325 -5.8731 36 1 4.2641 -9.2149 -3.6749 37 1 3.2109 -7.6144 -2.1282 38 1 4.0934 -1.3505 0.9612 39 1 3.9629 -0.1892 -0.4300 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_12335836.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:18:44 Heat of formation + Delta-G solvation = -61.330344 kcal Electronic energy + Delta-G solvation = -22262.575720 eV Core-core repulsion = 18750.927182 eV Total energy + Delta-G solvation = -3511.648538 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.130 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.76728 -40.94639 -40.07795 -38.55551 -37.58368 -34.71877 -34.43458 -33.93188 -32.08147 -29.95255 -27.37035 -26.79085 -25.61722 -23.97819 -22.67087 -22.08704 -21.44132 -20.29902 -18.71857 -18.39449 -18.05236 -17.73665 -17.62767 -17.01652 -16.90444 -16.41046 -16.07298 -15.99809 -15.47187 -15.17832 -15.09965 -14.76716 -14.52926 -14.43934 -13.89537 -13.72469 -13.63558 -13.41004 -13.08034 -12.94963 -12.87284 -12.32978 -12.04541 -11.90225 -11.77492 -11.64310 -11.06031 -10.95592 -10.69650 -10.33881 -10.12894 -10.01519 -9.70261 -4.98268 0.11649 0.31238 1.27470 1.53510 1.59309 1.61021 1.94005 2.04473 2.59799 2.65912 3.34499 3.41054 3.42135 3.56994 3.70685 3.71373 3.82316 3.88771 3.97569 3.98999 4.24454 4.25004 4.33160 4.45799 4.54630 4.54869 4.61187 4.67884 4.75625 4.84812 4.89742 4.93009 4.96143 5.06526 5.24002 5.41352 5.46111 5.52624 5.84966 5.89311 6.43546 6.51741 6.88590 7.23492 7.31115 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.839 5.839 2 C 0.519 3.481 3 O -0.597 6.597 4 C -0.126 4.126 5 H 0.150 0.850 6 C -0.127 4.127 7 C 0.119 3.881 8 H 0.081 0.919 9 N -0.697 5.697 10 C 0.517 3.483 11 O -0.580 6.580 12 C -0.096 4.096 13 C -0.071 4.071 14 C -0.112 4.112 15 C -0.105 4.105 16 C -0.097 4.097 17 C -0.080 4.080 18 O -0.562 6.562 19 Si 0.778 3.222 20 C -0.147 4.147 21 C -0.111 4.111 22 C -0.121 4.121 23 H 0.418 0.582 24 H 0.404 0.596 25 H 0.083 0.917 26 H 0.093 0.907 27 H 0.421 0.579 28 H 0.136 0.864 29 H 0.136 0.864 30 H 0.142 0.858 31 H 0.135 0.865 32 H 0.088 0.912 33 H 0.403 0.597 34 H -0.293 1.293 35 H -0.296 1.296 36 H 0.113 0.887 37 H 0.139 0.861 38 H 0.095 0.905 39 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.112 -4.700 3.068 6.418 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.401 5.401 2 C 0.305 3.695 3 O -0.477 6.477 4 C -0.147 4.147 5 H 0.168 0.832 6 C -0.166 4.166 7 C 0.013 3.987 8 H 0.099 0.901 9 N -0.350 5.350 10 C 0.304 3.696 11 O -0.459 6.459 12 C -0.135 4.135 13 C -0.071 4.071 14 C -0.130 4.130 15 C -0.123 4.123 16 C -0.097 4.097 17 C -0.190 4.190 18 O -0.372 6.372 19 Si 0.684 3.316 20 C -0.164 4.164 21 C -0.129 4.129 22 C -0.160 4.160 23 H 0.249 0.751 24 H 0.235 0.765 25 H 0.101 0.899 26 H 0.112 0.888 27 H 0.259 0.741 28 H 0.154 0.846 29 H 0.153 0.847 30 H 0.160 0.840 31 H 0.152 0.848 32 H 0.106 0.894 33 H 0.254 0.746 34 H -0.220 1.220 35 H -0.224 1.224 36 H 0.131 0.869 37 H 0.157 0.843 38 H 0.113 0.887 39 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -3.350 -3.717 2.545 5.614 hybrid contribution -0.536 0.657 0.432 0.952 sum -3.885 -3.060 2.978 5.773 Atomic orbital electron populations 1.43830 1.06534 1.13733 1.76050 1.20945 0.83372 0.91285 0.73909 1.90750 1.69465 1.35531 1.51979 1.22890 0.96197 0.94611 1.01028 0.83212 1.23279 0.97282 1.00963 0.95120 1.21677 0.97691 0.82921 0.96403 0.90081 1.45511 1.62198 1.08153 1.19122 1.21011 0.76019 0.86673 0.85848 1.90760 1.49224 1.85073 1.20793 1.20760 1.05567 0.88736 0.98427 1.19603 0.93694 0.96564 0.97256 1.21369 0.94663 0.97794 0.99125 1.21191 1.00631 0.95382 0.95050 1.19716 0.93360 0.98058 0.98588 1.24835 1.05238 0.90989 0.97948 1.86435 1.75373 1.37694 1.37702 0.94525 0.76796 0.81779 0.78489 1.21013 0.94422 1.00618 1.00394 1.21165 1.00793 0.95753 0.95144 1.23154 0.94114 0.97900 1.00810 0.75059 0.76525 0.89884 0.88827 0.74107 0.84639 0.84657 0.83977 0.84752 0.89371 0.74600 1.22048 1.22386 0.86950 0.84280 0.88664 0.89533 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.17 8.87 -173.53 -1.54 3.63 16 2 C 0.52 0.45 7.63 87.66 0.67 1.11 16 3 O -0.60 -7.10 16.74 -3.04 -0.05 -7.15 16 4 C -0.13 0.72 4.03 -11.01 -0.04 0.67 16 5 H 0.15 -1.93 8.14 -2.39 -0.02 -1.95 16 6 C -0.13 0.50 7.43 31.12 0.23 0.73 16 7 C 0.12 -0.20 4.32 45.51 0.20 0.00 16 8 H 0.08 0.38 7.46 -2.39 -0.02 0.36 16 9 N -0.70 3.89 5.26 -440.09 -2.32 1.58 16 10 C 0.52 0.34 7.82 87.66 0.69 1.03 16 11 O -0.58 -6.96 15.63 -3.05 -0.05 -7.01 16 12 C -0.10 0.48 5.83 29.10 0.17 0.65 16 13 C -0.07 -0.24 4.37 -19.87 -0.09 -0.32 16 14 C -0.11 -0.52 9.70 22.27 0.22 -0.30 16 15 C -0.10 -0.73 9.69 22.27 0.22 -0.51 16 16 C -0.10 -0.80 5.38 -19.87 -0.11 -0.90 16 17 C -0.08 -0.21 2.79 71.24 0.20 -0.01 16 18 O -0.56 -1.02 12.81 -148.98 -1.91 -2.93 16 19 Si 0.78 0.53 29.84 68.60 2.05 2.58 16 20 C -0.15 -1.28 8.67 22.27 0.19 -1.09 16 21 C -0.11 -0.63 9.70 22.27 0.22 -0.42 16 22 C -0.12 0.29 7.15 31.11 0.22 0.52 16 23 H 0.42 -5.37 8.83 -92.71 -0.82 -6.19 16 24 H 0.40 -2.46 8.93 -92.71 -0.83 -3.29 16 25 H 0.08 -0.07 8.09 -2.39 -0.02 -0.09 16 26 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 27 H 0.42 -5.52 8.70 -92.71 -0.81 -6.33 16 28 H 0.14 -1.47 8.09 -2.39 -0.02 -1.49 16 29 H 0.14 -1.42 8.09 -2.38 -0.02 -1.44 16 30 H 0.14 0.00 8.06 -2.91 -0.02 -0.02 16 31 H 0.13 0.57 8.06 -2.91 -0.02 0.55 16 32 H 0.09 -0.06 7.96 -2.39 -0.02 -0.08 16 33 H 0.40 -3.64 8.74 -74.06 -0.65 -4.29 16 34 H -0.29 -2.14 7.05 99.48 0.70 -1.44 16 35 H -0.30 -2.13 7.11 99.48 0.71 -1.42 16 36 H 0.11 0.92 4.87 -2.92 -0.01 0.90 16 37 H 0.14 0.16 8.06 -2.91 -0.02 0.14 16 38 H 0.09 -0.51 8.14 -2.38 -0.02 -0.53 16 39 H 0.09 0.27 7.43 -2.39 -0.02 0.25 16 Total: 0.00 -32.31 333.63 -2.79 -35.10 By element: Atomic # 1 Polarization: -25.01 SS G_CDS: -1.95 Total: -26.95 kcal Atomic # 6 Polarization: -1.82 SS G_CDS: 2.98 Total: 1.15 kcal Atomic # 7 Polarization: 9.07 SS G_CDS: -3.86 Total: 5.21 kcal Atomic # 8 Polarization: -15.08 SS G_CDS: -2.01 Total: -17.09 kcal Atomic # 14 Polarization: 0.53 SS G_CDS: 2.05 Total: 2.58 kcal Total: -32.31 -2.79 -35.10 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_12335836.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.231 kcal (2) G-P(sol) polarization free energy of solvation -32.313 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.543 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.787 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.100 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.330 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds