Wall clock time and date at job start Thu Mar 4 2021 13:18:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34778 * 1 3 3 O 1.21274 * 120.00667 * 2 1 4 4 C 1.50700 * 119.99577 * 179.97438 * 2 1 3 5 5 H 1.09003 * 112.85280 * 48.81184 * 4 2 1 6 6 C 1.53786 * 113.61528 * 180.02562 * 4 2 1 7 7 C 1.53782 * 87.07801 * 89.20138 * 6 4 2 8 8 H 1.08997 * 113.61710 * 270.79796 * 7 6 4 9 9 N 1.46506 * 113.61445 * 139.98182 * 7 6 4 10 10 C 1.34773 * 119.99969 * 156.25077 * 9 7 6 11 11 O 1.21595 * 120.00253 * 0.02562 * 10 9 7 12 12 C 1.47576 * 119.99792 * 180.02562 * 10 9 7 13 13 C 1.40198 * 119.83370 * 359.97438 * 12 10 9 14 14 C 1.36233 * 120.37898 * 179.97438 * 13 12 10 15 15 C 1.39872 * 119.96101 * 359.97438 * 14 13 12 16 16 C 1.46257 * 133.84188 * 179.97438 * 15 14 13 17 17 C 1.50695 * 126.48271 * 0.06560 * 16 15 14 18 18 O 1.42908 * 109.47157 * 284.99701 * 17 16 15 19 19 Si 1.86302 * 109.47323 * 164.99838 * 17 16 15 20 20 C 1.34457 * 107.03812 * 180.02562 * 16 15 14 21 21 N 1.36572 * 109.98189 * 0.02562 * 20 16 15 22 22 C 1.37831 * 109.86135 * 359.97438 * 21 20 16 23 23 C 1.38644 * 133.38151 * 180.28558 * 22 21 20 24 24 C 1.53785 * 87.17382 * 25.39227 * 7 6 4 25 25 H 0.96996 * 119.99998 * 179.97438 * 1 2 3 26 26 H 0.96996 * 119.99606 * 0.02562 * 1 2 3 27 27 H 1.08999 * 113.61478 * 334.65949 * 6 4 2 28 28 H 1.09000 * 113.61810 * 203.75075 * 6 4 2 29 29 H 0.97005 * 119.99811 * 336.53130 * 9 7 6 30 30 H 1.07997 * 119.80887 * 359.97438 * 13 12 10 31 31 H 1.07998 * 120.02008 * 179.97438 * 14 13 12 32 32 H 1.09003 * 109.47627 * 44.99570 * 17 16 15 33 33 H 0.96700 * 113.99824 * 300.00580 * 18 17 16 34 34 H 1.48501 * 110.00051 * 179.97438 * 19 17 16 35 35 H 1.48497 * 110.00030 * 301.31615 * 19 17 16 36 36 H 1.07996 * 125.00852 * 179.97438 * 20 16 15 37 37 H 0.96997 * 125.06546 * 179.97438 * 21 20 16 38 38 H 1.07999 * 120.16384 * 359.94392 * 23 22 21 39 39 H 1.08999 * 113.61375 * 89.15829 * 24 7 6 40 40 H 1.08994 * 113.61061 * 220.05623 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9543 1.0502 0.0000 4 6 2.1012 -1.3052 0.0006 5 1 1.7399 -2.0028 -0.7550 6 6 3.6295 -1.1343 0.0011 7 6 3.5486 -1.1213 1.5368 8 1 3.4009 -0.1269 1.9579 9 7 4.6339 -1.8593 2.1878 10 6 4.9858 -1.5622 3.4545 11 8 4.4022 -0.6820 4.0571 12 6 6.0794 -2.3053 4.1100 13 6 6.7496 -3.3199 3.4122 14 6 7.7610 -4.0125 4.0065 15 6 8.1360 -3.7118 5.3200 16 6 9.1483 -4.2441 6.2316 17 6 10.1244 -5.3539 5.9373 18 8 9.4418 -6.6090 5.9670 19 14 11.4742 -5.3505 7.2214 20 6 9.0439 -3.5555 7.3817 21 7 8.0476 -2.6268 7.2808 22 6 7.4696 -2.6940 6.0314 23 6 6.4447 -1.9907 5.4172 24 6 2.2487 -1.9315 1.3992 25 1 -0.4850 -0.8400 -0.0004 26 1 -0.4849 0.8400 -0.0004 27 1 3.9633 -0.1888 -0.4264 28 1 4.1653 -1.9943 -0.4007 29 1 5.1020 -2.5591 1.7058 30 1 6.4623 -3.5537 2.3977 31 1 8.2731 -4.7932 3.4637 32 1 10.5614 -5.2013 4.9504 33 1 9.0274 -6.8114 6.8170 34 1 12.4431 -6.4409 6.9426 35 1 12.1710 -4.0392 7.2223 36 1 9.6569 -3.7140 8.2566 37 1 7.7858 -2.0118 7.9837 38 1 5.9293 -1.2059 5.9509 39 1 2.4063 -3.0099 1.3803 40 1 1.4696 -1.6287 2.0986 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_12335838.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:18:48 Heat of formation + Delta-G solvation = -16.921735 kcal Electronic energy + Delta-G solvation = -25212.163377 eV Core-core repulsion = 21380.562348 eV Total energy + Delta-G solvation = -3831.601029 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.126 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.47106 -41.68802 -40.38191 -38.40594 -37.79049 -37.38915 -34.71643 -34.33401 -33.23561 -30.70928 -30.61381 -27.20305 -26.82087 -26.46013 -24.58780 -23.60293 -22.67311 -21.39993 -20.83055 -20.32540 -19.36115 -18.42230 -18.18417 -18.08246 -17.52549 -17.08503 -16.91305 -16.27329 -16.06837 -15.98913 -15.60612 -15.49247 -15.32138 -15.07838 -14.81774 -14.71148 -14.36308 -14.19032 -14.00690 -13.62414 -13.35312 -13.13399 -12.99958 -12.59710 -12.30444 -12.22627 -11.91190 -11.83991 -11.65835 -10.93242 -10.81395 -10.73659 -10.67467 -10.35177 -10.02591 -9.33722 -8.79876 -5.10087 -0.23913 0.41401 1.28932 1.38225 1.60185 1.62458 1.90429 1.97305 2.04117 2.28401 2.46413 2.95313 3.35200 3.37789 3.55189 3.59430 3.70324 3.77050 3.77665 3.79737 3.88203 4.11787 4.19909 4.33028 4.43479 4.45748 4.52851 4.53511 4.57347 4.71141 4.75205 4.81028 4.97148 5.00007 5.11270 5.26473 5.45263 5.46094 5.57265 5.62340 5.78343 6.00278 6.31856 6.37401 6.54362 6.65125 7.27181 7.29057 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.853 5.853 2 C 0.533 3.467 3 O -0.536 6.536 4 C -0.140 4.140 5 H 0.111 0.889 6 C -0.127 4.127 7 C 0.124 3.876 8 H 0.121 0.879 9 N -0.716 5.716 10 C 0.564 3.436 11 O -0.536 6.536 12 C -0.121 4.121 13 C -0.113 4.113 14 C -0.073 4.073 15 C -0.064 4.064 16 C -0.211 4.211 17 C -0.030 4.030 18 O -0.542 6.542 19 Si 0.685 3.315 20 C 0.077 3.923 21 N -0.584 5.584 22 C 0.081 3.919 23 C -0.056 4.056 24 C -0.136 4.136 25 H 0.403 0.597 26 H 0.404 0.596 27 H 0.092 0.908 28 H 0.096 0.904 29 H 0.401 0.599 30 H 0.126 0.874 31 H 0.130 0.870 32 H 0.111 0.889 33 H 0.377 0.623 34 H -0.255 1.255 35 H -0.256 1.256 36 H 0.179 0.821 37 H 0.422 0.578 38 H 0.136 0.864 39 H 0.099 0.901 40 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.351 -5.281 1.803 5.742 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.416 5.416 2 C 0.317 3.683 3 O -0.412 6.412 4 C -0.162 4.162 5 H 0.129 0.871 6 C -0.165 4.165 7 C 0.019 3.981 8 H 0.139 0.861 9 N -0.367 5.367 10 C 0.352 3.648 11 O -0.414 6.414 12 C -0.126 4.126 13 C -0.133 4.133 14 C -0.091 4.091 15 C -0.069 4.069 16 C -0.219 4.219 17 C -0.141 4.141 18 O -0.347 6.347 19 Si 0.586 3.414 20 C -0.052 4.052 21 N -0.186 5.186 22 C -0.025 4.025 23 C -0.077 4.077 24 C -0.175 4.175 25 H 0.231 0.769 26 H 0.235 0.765 27 H 0.111 0.889 28 H 0.114 0.886 29 H 0.238 0.762 30 H 0.144 0.856 31 H 0.148 0.852 32 H 0.129 0.871 33 H 0.224 0.776 34 H -0.179 1.179 35 H -0.181 1.181 36 H 0.196 0.804 37 H 0.260 0.740 38 H 0.154 0.846 39 H 0.117 0.883 40 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -0.153 -3.919 1.882 4.351 hybrid contribution -0.682 0.055 -0.512 0.855 sum -0.835 -3.864 1.370 4.184 Atomic orbital electron populations 1.43820 1.07119 1.12749 1.77904 1.20077 0.82671 0.90624 0.74930 1.90781 1.68169 1.33364 1.48879 1.22267 0.97434 0.95785 1.00722 0.87097 1.23238 0.93506 1.04361 0.95405 1.22633 0.85825 0.97188 0.92428 0.86135 1.45870 1.37175 1.39516 1.14162 1.18209 0.82566 0.82538 0.81514 1.90801 1.54630 1.31811 1.64153 1.19439 0.98898 0.99540 0.94704 1.20678 0.96829 0.96133 0.99654 1.20198 0.96723 0.99276 0.92953 1.19175 0.96897 0.96481 0.94324 1.20727 1.03064 1.03786 0.94318 1.24332 0.99504 0.82148 1.08125 1.86506 1.73656 1.35047 1.39497 0.95273 0.78904 0.80944 0.86269 1.21748 0.92630 0.91561 0.99235 1.41724 1.30656 1.33339 1.12907 1.18078 0.98217 0.99767 0.86426 1.20085 0.94885 0.98956 0.93824 1.23468 0.98806 1.00917 0.94288 0.76892 0.76520 0.88923 0.88562 0.76232 0.85643 0.85223 0.87144 0.77587 1.17902 1.18092 0.80450 0.74000 0.84617 0.88283 0.90355 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 1.77 8.87 31.22 0.28 2.04 16 2 C 0.53 0.66 7.36 -10.98 -0.08 0.57 16 3 O -0.54 -3.19 16.59 5.56 0.09 -3.10 16 4 C -0.14 0.21 4.34 -90.87 -0.39 -0.18 16 5 H 0.11 -0.43 8.14 -51.93 -0.42 -0.86 16 6 C -0.13 0.10 7.20 -25.92 -0.19 -0.09 16 7 C 0.12 0.12 3.87 -67.11 -0.26 -0.14 16 8 H 0.12 0.53 7.43 -51.93 -0.39 0.15 16 9 N -0.72 -0.34 5.31 -54.04 -0.29 -0.63 16 10 C 0.56 2.00 7.76 -12.45 -0.10 1.91 16 11 O -0.54 -3.95 15.93 5.28 0.08 -3.87 16 12 C -0.12 -0.28 5.87 -104.95 -0.62 -0.90 16 13 C -0.11 -0.05 9.46 -39.57 -0.37 -0.42 16 14 C -0.07 -0.08 10.03 -39.69 -0.40 -0.48 16 15 C -0.06 -0.12 6.35 -105.05 -0.67 -0.78 16 16 C -0.21 0.00 5.57 -102.74 -0.57 -0.58 16 17 C -0.03 0.02 3.06 36.00 0.11 0.13 16 18 O -0.54 -0.01 12.88 -35.23 -0.45 -0.46 16 19 Si 0.68 -1.36 30.75 -169.99 -5.23 -6.58 16 20 C 0.08 -0.15 10.43 -16.78 -0.17 -0.33 16 21 N -0.58 0.75 6.07 -10.68 -0.06 0.68 16 22 C 0.08 0.12 7.26 -84.00 -0.61 -0.49 16 23 C -0.06 -0.13 9.61 -39.03 -0.37 -0.51 16 24 C -0.14 0.18 7.47 -25.83 -0.19 -0.01 16 25 H 0.40 -2.03 8.83 -40.82 -0.36 -2.39 16 26 H 0.40 -0.95 8.93 -40.82 -0.36 -1.31 16 27 H 0.09 0.12 7.43 -51.93 -0.39 -0.27 16 28 H 0.10 -0.31 8.11 -51.93 -0.42 -0.73 16 29 H 0.40 -0.97 6.70 -40.82 -0.27 -1.24 16 30 H 0.13 -0.32 6.36 -52.49 -0.33 -0.65 16 31 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 32 H 0.11 0.02 7.96 -51.93 -0.41 -0.39 16 33 H 0.38 -1.46 8.70 45.56 0.40 -1.06 16 34 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 35 H -0.26 -0.15 7.11 56.52 0.40 0.25 16 36 H 0.18 -1.02 6.35 -52.49 -0.33 -1.35 16 37 H 0.42 -1.68 8.96 -40.82 -0.37 -2.05 16 38 H 0.14 0.31 7.62 -52.49 -0.40 -0.09 16 39 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 40 H 0.08 -0.04 8.10 -51.93 -0.42 -0.46 16 LS Contribution 342.08 15.07 5.16 5.16 Total: 0.00 -12.80 342.08 -9.84 -22.64 By element: Atomic # 1 Polarization: -9.06 SS G_CDS: -4.53 Total: -13.59 kcal Atomic # 6 Polarization: 2.59 SS G_CDS: -4.89 Total: -2.30 kcal Atomic # 7 Polarization: 2.17 SS G_CDS: -0.07 Total: 2.09 kcal Atomic # 8 Polarization: -7.15 SS G_CDS: -0.28 Total: -7.42 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.23 Total: -6.58 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -12.80 -9.84 -22.64 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_12335838.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.720 kcal (2) G-P(sol) polarization free energy of solvation -12.801 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.081 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.841 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.642 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.922 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds