Wall clock time and date at job start Thu Mar 4 2021 13:18:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.34858 * 125.90020 * 2 1 4 4 C 1.40945 * 107.46620 * 179.97438 * 3 2 1 5 5 C 1.50698 * 126.26352 * 179.97438 * 4 3 2 6 6 O 1.42903 * 109.47420 * 255.02868 * 5 4 3 7 7 Si 1.86297 * 109.47248 * 15.03054 * 5 4 3 8 8 C 1.34857 * 107.46487 * 359.77532 * 4 3 2 9 9 C 1.50704 * 125.89554 * 180.21677 * 8 4 3 10 10 N 1.36564 * 108.20142 * 0.36368 * 8 4 3 11 11 C 1.40223 * 125.66378 * 179.88825 * 10 8 4 12 12 C 1.38552 * 119.99601 * 244.71625 * 11 10 8 13 13 C 1.39501 * 119.78543 * 179.97438 * 12 11 10 14 14 C 1.47855 * 120.11338 * 180.02562 * 13 12 11 15 15 O 1.21553 * 119.99955 * 359.97438 * 14 13 12 16 16 N 1.34777 * 119.99755 * 179.97438 * 14 13 12 17 17 C 1.46499 * 119.99665 * 179.72373 * 16 14 13 18 18 H 1.09002 * 112.85201 * 24.08188 * 17 16 14 19 19 C 1.53784 * 113.61491 * 155.28109 * 17 16 14 20 20 C 1.53783 * 87.08338 * 139.98310 * 19 17 16 21 21 H 1.09003 * 113.61162 * 219.93677 * 20 19 17 22 22 C 1.50696 * 113.61711 * 89.11643 * 20 19 17 23 23 N 1.34776 * 119.99953 * 180.02562 * 22 20 19 24 24 O 1.21282 * 120.00046 * 359.97438 * 22 20 19 25 25 C 1.53780 * 87.07825 * 334.56565 * 20 19 17 26 26 C 1.39576 * 119.77106 * 0.27296 * 13 12 11 27 27 C 1.38020 * 119.98800 * 359.42915 * 26 13 12 28 28 C 1.38219 * 120.21295 * 0.59805 * 27 26 13 29 29 H 1.08995 * 109.46877 * 270.02680 * 1 2 3 30 30 H 1.08999 * 109.47012 * 30.02389 * 1 2 3 31 31 H 1.08997 * 109.47307 * 150.01829 * 1 2 3 32 32 H 1.07998 * 126.26508 * 359.97438 * 3 2 1 33 33 H 1.08999 * 109.46894 * 135.02949 * 5 4 3 34 34 H 0.96698 * 113.99886 * 59.99903 * 6 5 4 35 35 H 1.48502 * 109.99844 * 58.67921 * 7 5 4 36 36 H 1.48502 * 110.00325 * 179.97438 * 7 5 4 37 37 H 1.08994 * 109.47365 * 270.17029 * 9 8 4 38 38 H 1.09006 * 109.46696 * 30.17049 * 9 8 4 39 39 H 1.08997 * 109.46623 * 150.16802 * 9 8 4 40 40 H 1.07998 * 120.10793 * 359.96248 * 12 11 10 41 41 H 0.97001 * 120.00485 * 0.02562 * 16 14 13 42 42 H 1.09000 * 113.61044 * 254.52540 * 19 17 16 43 43 H 1.08999 * 113.61555 * 25.34324 * 19 17 16 44 44 H 0.97006 * 120.00041 * 359.97438 * 23 22 20 45 45 H 0.96997 * 120.00326 * 180.02562 * 23 22 20 46 46 H 1.08998 * 113.61772 * 270.88604 * 25 20 19 47 47 H 1.09001 * 113.61751 * 139.98662 * 25 20 19 48 48 H 1.08002 * 120.00664 * 179.70511 * 26 13 12 49 49 H 1.08001 * 119.89293 * 180.27482 * 27 26 13 50 50 H 1.08010 * 119.88437 * 179.69936 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2978 1.0924 0.0000 4 6 3.6349 0.6467 0.0006 5 6 4.8647 1.5176 0.0003 6 8 5.4550 1.5080 -1.3011 7 14 4.3912 3.2612 0.4545 8 6 3.6121 -0.7017 0.0060 9 6 4.8178 -1.6057 0.0132 10 7 2.3078 -1.1062 0.0005 11 6 1.8644 -2.4365 0.0013 12 6 1.1645 -2.9341 -1.0860 13 6 0.7260 -4.2584 -1.0808 14 6 -0.0210 -4.7970 -2.2375 15 8 -0.2544 -4.0854 -3.1950 16 7 -0.4431 -6.0769 -2.2302 17 6 -1.1885 -6.6088 -3.3738 18 1 -0.9899 -6.0662 -4.2980 19 6 -1.0832 -8.1360 -3.5213 20 6 -2.5749 -8.1239 -3.8951 21 1 -3.1392 -8.9520 -3.4662 22 6 -2.8261 -7.9464 -5.3703 23 7 -4.0891 -7.9166 -5.8400 24 8 -1.8919 -7.8294 -6.1348 25 6 -2.6853 -6.8184 -3.0899 26 6 0.9904 -5.0716 0.0223 27 6 1.6937 -4.5681 1.0978 28 6 2.1275 -3.2558 1.0923 29 1 -0.3633 0.0005 1.0276 30 1 -0.3633 0.8898 -0.5142 31 1 -0.3634 -0.8901 -0.5135 32 1 1.9670 2.1205 -0.0004 33 1 5.5812 1.1347 0.7270 34 1 4.8725 1.8365 -1.9996 35 1 3.7474 3.2804 1.7925 36 1 5.5955 4.1300 0.4583 37 1 5.1133 -1.8254 -1.0127 38 1 5.6400 -1.1107 0.5301 39 1 4.5721 -2.5348 0.5274 40 1 0.9590 -2.2987 -1.9348 41 1 -0.2572 -6.6447 -1.4660 42 1 -0.4316 -8.4520 -4.3359 43 1 -0.8705 -8.6515 -2.5848 44 1 -4.8363 -8.0098 -5.2285 45 1 -4.2509 -7.8027 -6.7896 46 1 -2.9120 -6.9738 -2.0351 47 1 -3.3271 -6.0708 -3.5560 48 1 0.6485 -6.0961 0.0324 49 1 1.9012 -5.2001 1.9487 50 1 2.6733 -2.8658 1.9389 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_12335854.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:18:54 Heat of formation + Delta-G solvation = -5.239771 kcal Electronic energy + Delta-G solvation = -32931.698659 eV Core-core repulsion = 28505.765201 eV Total energy + Delta-G solvation = -4425.933458 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.173 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -42.91638 -41.86400 -40.93507 -39.50039 -38.32730 -37.68166 -35.06246 -34.64484 -34.00652 -33.74276 -32.31515 -30.47650 -30.18105 -27.38366 -27.19898 -26.75108 -25.06468 -24.70403 -23.69493 -22.80263 -21.98441 -21.04610 -20.61251 -20.10433 -18.78241 -18.26631 -18.04799 -17.54326 -17.44724 -17.39072 -17.21248 -16.74044 -16.29760 -16.09491 -15.88226 -15.64397 -15.35905 -15.26592 -15.05755 -14.96930 -14.69273 -14.40125 -14.32073 -14.19164 -13.98888 -13.79250 -13.51983 -13.50096 -13.33844 -13.25015 -13.21567 -13.04812 -12.93668 -12.71403 -12.45505 -12.15112 -11.87800 -11.81053 -11.69585 -11.21424 -10.99887 -10.69945 -10.48052 -10.35457 -10.28223 -10.08836 -9.53088 -8.85985 -4.93139 -0.45975 -0.06299 1.06236 1.43192 1.53673 1.60678 1.63980 1.74527 1.81920 1.99305 2.04646 2.53957 2.56434 3.35774 3.41233 3.47296 3.65497 3.65618 3.68450 3.72805 3.86187 3.87976 3.92834 3.96243 4.09896 4.17497 4.26078 4.30480 4.38934 4.42373 4.51925 4.53354 4.62668 4.66891 4.68221 4.68493 4.72114 4.79299 4.85038 4.94817 4.95851 5.00210 5.01381 5.04906 5.06217 5.12435 5.15410 5.34433 5.42397 5.53471 5.84254 5.97075 6.13144 6.38481 6.43501 6.44648 6.83702 7.05535 7.31054 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 C 0.012 3.988 3 C -0.194 4.194 4 C -0.206 4.206 5 C -0.038 4.038 6 O -0.561 6.561 7 Si 0.784 3.216 8 C 0.033 3.967 9 C -0.081 4.081 10 N -0.407 5.407 11 C 0.098 3.902 12 C -0.067 4.067 13 C -0.132 4.132 14 C 0.556 3.444 15 O -0.583 6.583 16 N -0.693 5.693 17 C 0.108 3.892 18 H 0.074 0.926 19 C -0.119 4.119 20 C -0.130 4.130 21 H 0.150 0.850 22 C 0.520 3.480 23 N -0.837 5.837 24 O -0.595 6.595 25 C -0.121 4.121 26 C -0.063 4.063 27 C -0.099 4.099 28 C -0.088 4.088 29 H 0.079 0.921 30 H 0.097 0.903 31 H 0.055 0.945 32 H 0.165 0.835 33 H 0.098 0.902 34 H 0.391 0.609 35 H -0.292 1.292 36 H -0.300 1.300 37 H 0.067 0.933 38 H 0.083 0.917 39 H 0.072 0.928 40 H 0.115 0.885 41 H 0.420 0.580 42 H 0.064 0.936 43 H 0.135 0.865 44 H 0.420 0.580 45 H 0.405 0.595 46 H 0.131 0.869 47 H 0.066 0.934 48 H 0.173 0.827 49 H 0.177 0.823 50 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.522 -7.181 7.033 12.554 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C -0.096 4.096 3 C -0.217 4.217 4 C -0.212 4.212 5 C -0.149 4.149 6 O -0.368 6.368 7 Si 0.691 3.309 8 C -0.077 4.077 9 C -0.139 4.139 10 N -0.082 5.082 11 C 0.008 3.992 12 C -0.087 4.087 13 C -0.136 4.136 14 C 0.344 3.656 15 O -0.464 6.464 16 N -0.345 5.345 17 C 0.003 3.997 18 H 0.092 0.908 19 C -0.157 4.157 20 C -0.152 4.152 21 H 0.168 0.832 22 C 0.306 3.694 23 N -0.400 5.400 24 O -0.476 6.476 25 C -0.160 4.160 26 C -0.081 4.081 27 C -0.117 4.117 28 C -0.107 4.107 29 H 0.098 0.902 30 H 0.116 0.884 31 H 0.074 0.926 32 H 0.182 0.818 33 H 0.116 0.884 34 H 0.240 0.760 35 H -0.219 1.219 36 H -0.228 1.228 37 H 0.086 0.914 38 H 0.102 0.898 39 H 0.091 0.909 40 H 0.133 0.867 41 H 0.260 0.740 42 H 0.083 0.917 43 H 0.153 0.847 44 H 0.251 0.749 45 H 0.236 0.764 46 H 0.149 0.851 47 H 0.085 0.915 48 H 0.191 0.809 49 H 0.194 0.806 50 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -6.520 -6.544 6.905 11.533 hybrid contribution -0.005 -0.359 -0.268 0.448 sum -6.524 -6.903 6.637 11.587 Atomic orbital electron populations 1.20397 0.86744 1.03740 1.03279 1.20825 0.94460 0.85083 1.09251 1.20849 0.91512 0.98484 1.10867 1.19806 0.95392 0.92818 1.13204 1.24476 0.93315 1.08914 0.88183 1.86420 1.44221 1.89007 1.17170 0.93515 0.80601 0.74163 0.82614 1.20571 0.84388 0.94567 1.08129 1.20328 0.93040 0.97714 1.02780 1.41506 1.05609 1.03353 1.57705 1.17672 1.01908 0.83838 0.95748 1.21108 0.95990 0.95115 0.96486 1.19736 1.03286 0.94442 0.96130 1.18551 0.78325 0.82566 0.86173 1.90802 1.58736 1.59632 1.37257 1.45695 1.56083 1.11182 1.21537 1.22637 0.92604 0.95188 0.89277 0.90752 1.23289 0.94888 0.93614 1.03941 1.22224 1.00199 1.02243 0.90488 0.83230 1.20741 0.83019 0.74341 0.91310 1.43760 1.07603 1.75058 1.13567 1.90765 1.44609 1.51680 1.60552 1.23419 0.95168 0.94913 1.02465 1.21809 0.94866 1.00634 0.90820 1.21461 0.96335 0.94204 0.99683 1.21661 0.98243 0.94691 0.96088 0.90221 0.88424 0.92608 0.81801 0.88445 0.75992 1.21870 1.22846 0.91449 0.89779 0.90922 0.86739 0.73993 0.91682 0.84737 0.74887 0.76426 0.85097 0.91482 0.80943 0.80563 0.84053 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.10 10.08 71.24 0.72 0.62 16 2 C 0.01 0.07 6.81 41.04 0.28 0.35 16 3 C -0.19 -0.88 9.27 22.16 0.21 -0.67 16 4 C -0.21 -1.24 5.35 -19.98 -0.11 -1.35 16 5 C -0.04 -0.17 2.61 71.24 0.19 0.01 16 6 O -0.56 -2.97 12.88 -148.98 -1.92 -4.89 16 7 Si 0.78 1.71 30.81 68.60 2.11 3.82 16 8 C 0.03 0.22 6.81 41.05 0.28 0.50 16 9 C -0.08 -0.29 9.87 71.24 0.70 0.42 16 10 N -0.41 -2.50 2.79 -320.36 -0.89 -3.39 16 11 C 0.10 0.34 5.02 38.04 0.19 0.53 16 12 C -0.07 -0.37 8.32 22.65 0.19 -0.18 16 13 C -0.13 -0.17 5.87 -20.10 -0.12 -0.29 16 14 C 0.56 3.05 7.77 86.79 0.67 3.73 16 15 O -0.58 -9.51 15.95 -3.88 -0.06 -9.57 16 16 N -0.69 1.82 5.31 -442.89 -2.35 -0.53 16 17 C 0.11 0.03 3.89 45.52 0.18 0.21 16 18 H 0.07 0.80 7.39 -2.39 -0.02 0.78 16 19 C -0.12 0.53 7.20 31.12 0.22 0.76 16 20 C -0.13 0.81 4.34 -11.01 -0.05 0.76 16 21 H 0.15 -2.01 8.14 -2.39 -0.02 -2.03 16 22 C 0.52 0.93 7.36 87.66 0.64 1.58 16 23 N -0.84 4.49 8.87 -173.54 -1.54 2.95 16 24 O -0.60 -7.91 16.58 -3.04 -0.05 -7.96 16 25 C -0.12 0.74 7.46 31.12 0.23 0.97 16 26 C -0.06 0.46 9.54 22.54 0.21 0.67 16 27 C -0.10 0.77 10.02 22.21 0.22 0.99 16 28 C -0.09 0.19 8.74 22.44 0.20 0.39 16 29 H 0.08 -0.05 8.14 -2.39 -0.02 -0.07 16 30 H 0.10 -0.17 8.14 -2.39 -0.02 -0.19 16 31 H 0.05 0.17 6.85 -2.39 -0.02 0.15 16 32 H 0.16 -0.09 6.59 -2.91 -0.02 -0.11 16 33 H 0.10 0.50 7.49 -2.39 -0.02 0.49 16 34 H 0.39 -0.64 8.70 -74.06 -0.64 -1.28 16 35 H -0.29 -2.19 7.11 99.48 0.71 -1.48 16 36 H -0.30 -2.63 7.11 99.48 0.71 -1.92 16 37 H 0.07 0.33 8.14 -2.39 -0.02 0.31 16 38 H 0.08 0.21 7.50 -2.38 -0.02 0.19 16 39 H 0.07 0.05 6.83 -2.39 -0.02 0.03 16 40 H 0.11 1.23 7.65 -2.91 -0.02 1.21 16 41 H 0.42 -4.78 6.76 -92.71 -0.63 -5.41 16 42 H 0.06 0.14 7.43 -2.39 -0.02 0.12 16 43 H 0.13 -1.66 8.12 -2.39 -0.02 -1.68 16 44 H 0.42 -5.24 8.83 -92.70 -0.82 -6.06 16 45 H 0.40 -2.07 8.93 -92.71 -0.83 -2.90 16 46 H 0.13 -1.58 8.14 -2.39 -0.02 -1.60 16 47 H 0.07 -0.21 8.09 -2.39 -0.02 -0.23 16 48 H 0.17 -2.70 6.40 -2.91 -0.02 -2.72 16 49 H 0.18 -2.56 8.06 -2.91 -0.02 -2.59 16 50 H 0.14 -0.51 8.06 -2.91 -0.02 -0.54 16 Total: 0.00 -35.61 414.12 -1.49 -37.10 By element: Atomic # 1 Polarization: -25.67 SS G_CDS: -1.85 Total: -27.52 kcal Atomic # 6 Polarization: 4.93 SS G_CDS: 5.06 Total: 9.99 kcal Atomic # 7 Polarization: 3.80 SS G_CDS: -4.78 Total: -0.98 kcal Atomic # 8 Polarization: -20.39 SS G_CDS: -2.03 Total: -22.42 kcal Atomic # 14 Polarization: 1.71 SS G_CDS: 2.11 Total: 3.82 kcal Total: -35.61 -1.49 -37.10 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_12335854.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.861 kcal (2) G-P(sol) polarization free energy of solvation -35.614 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.753 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.486 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.100 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.240 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds