Wall clock time and date at job start Thu Mar 4 2021 13:19:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21280 * 119.99622 * 2 1 4 4 C 1.50701 * 120.00182 * 180.02562 * 2 1 3 5 5 H 1.08994 * 112.84700 * 311.18931 * 4 2 1 6 6 C 1.53774 * 113.61576 * 82.50180 * 4 2 1 7 7 C 1.53783 * 87.08325 * 139.97898 * 6 4 2 8 8 H 1.08997 * 113.69077 * 220.00478 * 7 6 4 9 9 N 1.46504 * 113.61173 * 89.11065 * 7 6 4 10 10 C 1.34776 * 119.99628 * 107.50544 * 9 7 6 11 11 O 1.21588 * 120.00203 * 359.97438 * 10 9 7 12 12 C 1.47578 * 120.00093 * 179.97438 * 10 9 7 13 13 C 1.36498 * 120.01186 * 180.02562 * 12 10 9 14 14 N 1.35944 * 120.50507 * 180.02562 * 13 12 10 15 15 C 1.37000 * 132.41362 * 179.97438 * 14 13 12 16 16 C 1.50705 * 126.42450 * 359.96794 * 15 14 13 17 17 O 1.42894 * 109.47171 * 329.99983 * 16 15 14 18 18 Si 1.86298 * 109.46780 * 209.99424 * 16 15 14 19 19 C 1.35001 * 107.14259 * 180.22996 * 15 14 13 20 20 N 1.33580 * 108.65694 * 359.63425 * 19 15 14 21 21 C 1.32414 * 109.22292 * 0.37425 * 20 19 15 22 22 C 1.41248 * 132.11830 * 179.76778 * 21 20 19 23 23 Br 1.89101 * 120.25586 * 359.97438 * 22 21 20 24 24 C 1.35706 * 119.49029 * 180.02562 * 22 21 20 25 25 C 1.53783 * 87.08072 * 334.56697 * 7 6 4 26 26 H 0.97003 * 119.99728 * 179.97438 * 1 2 3 27 27 H 0.96994 * 120.00252 * 359.97438 * 1 2 3 28 28 H 1.09003 * 113.61625 * 25.42911 * 6 4 2 29 29 H 1.09002 * 113.61224 * 254.52634 * 6 4 2 30 30 H 0.96996 * 119.99985 * 287.50307 * 9 7 6 31 31 H 1.07998 * 119.74630 * 0.02562 * 13 12 10 32 32 H 1.09004 * 109.46779 * 90.00307 * 16 15 14 33 33 H 0.96709 * 113.99337 * 180.02562 * 17 16 15 34 34 H 1.48506 * 109.99834 * 60.00830 * 18 16 15 35 35 H 1.48502 * 110.00011 * 181.32094 * 18 16 15 36 36 H 1.08004 * 125.67194 * 179.77291 * 19 15 14 37 37 H 1.07999 * 120.23422 * 179.97438 * 24 22 21 38 38 H 1.08997 * 113.61887 * 139.97699 * 25 7 6 39 39 H 1.09000 * 113.61253 * 270.80221 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1013 -1.3051 -0.0006 5 1 1.7401 -2.0027 0.7550 6 6 2.2501 -1.9299 -1.3978 7 6 3.6826 -2.3111 -0.9886 8 1 4.4151 -2.1801 -1.7850 9 7 3.7782 -3.6200 -0.3374 10 6 4.3240 -4.6618 -0.9955 11 8 4.7366 -4.5155 -2.1299 12 6 4.4209 -5.9801 -0.3394 13 6 4.9741 -7.0353 -1.0056 14 7 5.0679 -8.2542 -0.4110 15 6 5.5659 -9.4560 -0.8406 16 6 6.1800 -9.7403 -2.1872 17 8 5.5911 -8.8855 -3.1692 18 14 5.8720 -11.5191 -2.6470 19 6 5.3980 -10.3392 0.1665 20 7 4.8222 -9.7104 1.1948 21 6 4.6090 -8.4451 0.8679 22 6 4.0331 -7.3676 1.5769 23 35 3.3964 -7.6187 3.3397 24 6 3.9393 -6.1511 0.9829 25 6 3.6296 -1.1339 -0.0005 26 1 -0.4850 -0.8401 -0.0004 27 1 -0.4850 0.8400 0.0004 28 1 2.2065 -1.2024 -2.2083 29 1 1.6000 -2.7890 -1.5633 30 1 3.4488 -3.7367 0.5674 31 1 5.3401 -6.9008 -2.0127 32 1 7.2536 -9.5572 -2.1428 33 1 5.9394 -9.0141 -4.0622 34 1 4.4117 -11.7817 -2.7109 35 1 6.5000 -11.8208 -3.9585 36 1 5.6840 -11.3805 0.1453 37 1 3.5007 -5.3191 1.5137 38 1 4.0931 -1.3504 0.9619 39 1 3.9645 -0.1891 -0.4286 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_12335884.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:19:09 Heat of formation + Delta-G solvation = 20.157387 kcal Electronic energy + Delta-G solvation = -27861.714829 eV Core-core repulsion = 23626.477758 eV Total energy + Delta-G solvation = -4235.237071 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.031 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -44.23488 -41.82691 -40.70773 -38.86374 -38.30458 -37.96679 -35.45398 -34.70198 -34.36986 -32.45789 -31.86038 -30.25607 -27.64081 -26.86678 -26.76325 -25.47260 -24.06300 -22.63682 -22.28141 -21.97370 -20.35434 -19.35127 -18.77062 -18.64144 -18.35704 -17.89470 -17.73713 -17.44023 -17.00691 -16.44334 -16.30368 -16.03884 -15.98932 -15.58233 -15.45081 -15.36628 -14.91509 -14.58420 -14.51705 -14.11848 -13.70440 -13.41043 -13.38522 -13.30661 -13.00939 -12.94191 -12.84737 -12.15619 -11.77872 -11.64248 -11.57704 -11.47807 -11.34947 -11.29210 -10.93450 -10.89809 -10.66119 -10.29356 -9.98897 -9.03982 -4.93904 -0.89109 -0.36877 0.20403 0.95523 1.17723 1.39466 1.59257 1.64287 1.79341 1.88673 1.99826 2.21721 2.63631 2.79108 2.96118 3.16001 3.34731 3.38716 3.41959 3.43281 3.54496 3.72536 3.91715 3.95248 4.14067 4.27128 4.30646 4.32800 4.45573 4.50866 4.56426 4.71810 4.76430 4.83842 4.92725 4.99055 5.05122 5.31956 5.43844 5.57995 5.88163 6.27336 6.42091 6.46965 6.48885 6.94265 7.34451 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.840 5.840 2 C 0.520 3.480 3 O -0.596 6.596 4 C -0.131 4.131 5 H 0.149 0.851 6 C -0.127 4.127 7 C 0.121 3.879 8 H 0.095 0.905 9 N -0.686 5.686 10 C 0.584 3.416 11 O -0.564 6.564 12 C -0.173 4.173 13 C 0.165 3.835 14 N -0.360 5.360 15 C -0.052 4.052 16 C -0.055 4.055 17 O -0.565 6.565 18 Si 0.808 3.192 19 C 0.041 3.959 20 N -0.491 5.491 21 C 0.221 3.779 22 C -0.081 4.081 23 Br 0.008 6.992 24 C -0.024 4.024 25 C -0.121 4.121 26 H 0.418 0.582 27 H 0.404 0.596 28 H 0.089 0.911 29 H 0.094 0.906 30 H 0.418 0.582 31 H 0.187 0.813 32 H 0.109 0.891 33 H 0.406 0.594 34 H -0.307 1.307 35 H -0.272 1.272 36 H 0.230 0.770 37 H 0.189 0.811 38 H 0.096 0.904 39 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.036 -3.263 0.536 3.465 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.402 5.402 2 C 0.306 3.694 3 O -0.476 6.476 4 C -0.152 4.152 5 H 0.167 0.833 6 C -0.166 4.166 7 C 0.015 3.985 8 H 0.113 0.887 9 N -0.338 5.338 10 C 0.371 3.629 11 O -0.444 6.444 12 C -0.180 4.180 13 C 0.039 3.961 14 N -0.033 5.033 15 C -0.162 4.162 16 C -0.162 4.162 17 O -0.376 6.376 18 Si 0.709 3.291 19 C -0.108 4.108 20 N -0.210 5.210 21 C -0.024 4.024 22 C -0.163 4.163 23 Br 0.093 6.907 24 C -0.050 4.050 25 C -0.159 4.159 26 H 0.249 0.751 27 H 0.234 0.766 28 H 0.108 0.892 29 H 0.113 0.887 30 H 0.257 0.743 31 H 0.204 0.796 32 H 0.126 0.874 33 H 0.259 0.741 34 H -0.234 1.234 35 H -0.198 1.198 36 H 0.246 0.754 37 H 0.206 0.794 38 H 0.114 0.886 39 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -1.286 -3.461 1.054 3.839 hybrid contribution -0.349 1.297 -1.794 2.241 sum -1.635 -2.164 -0.740 2.812 Atomic orbital electron populations 1.43847 1.06606 1.13706 1.76073 1.20919 0.83316 0.91265 0.73910 1.90752 1.69434 1.35490 1.51952 1.22940 0.96365 0.94702 1.01206 0.83343 1.23305 0.96915 1.01144 0.95209 1.21808 0.98360 0.81645 0.96670 0.88715 1.45310 1.61227 1.08329 1.18942 1.17508 0.77128 0.83398 0.84884 1.90845 1.49707 1.84474 1.19324 1.19212 1.08596 0.94282 0.95958 1.22175 0.93201 0.81496 0.99250 1.42720 1.39188 1.08476 1.12905 1.21445 1.11134 0.84099 0.99553 1.24779 0.99599 1.08294 0.83571 1.86436 1.67805 1.61115 1.22276 0.93589 0.78633 0.72976 0.83867 1.22970 0.98922 1.01394 0.87548 1.70838 1.19497 1.01795 1.28861 1.20751 1.03222 0.94447 0.83946 1.20579 1.07251 0.93105 0.95398 1.96836 1.85585 1.97944 1.10312 1.21364 0.94916 0.96345 0.92331 1.23185 0.93964 0.97914 1.00862 0.75098 0.76560 0.89212 0.88732 0.74324 0.79629 0.87359 0.74137 1.23430 1.19828 0.75428 0.79360 0.88569 0.88948 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.78 8.87 -173.53 -1.54 4.24 16 2 C 0.52 -0.15 7.63 87.66 0.67 0.52 16 3 O -0.60 -6.32 16.74 -3.03 -0.05 -6.37 16 4 C -0.13 0.92 4.03 -11.01 -0.04 0.88 16 5 H 0.15 -2.06 8.14 -2.39 -0.02 -2.07 16 6 C -0.13 0.75 7.43 31.12 0.23 0.98 16 7 C 0.12 -0.47 4.32 45.52 0.20 -0.28 16 8 H 0.09 0.07 7.46 -2.39 -0.02 0.05 16 9 N -0.69 4.06 5.21 -443.15 -2.31 1.75 16 10 C 0.58 0.50 7.76 86.71 0.67 1.17 16 11 O -0.56 -4.99 15.87 -3.99 -0.06 -5.06 16 12 C -0.17 -0.02 5.84 -20.35 -0.12 -0.14 16 13 C 0.17 0.60 9.91 83.65 0.83 1.42 16 14 N -0.36 -1.86 2.93 -337.71 -0.99 -2.85 16 15 C -0.05 -0.12 6.28 41.01 0.26 0.14 16 16 C -0.05 0.20 3.05 71.24 0.22 0.41 16 17 O -0.56 0.75 10.88 -148.98 -1.62 -0.87 16 18 Si 0.81 -4.62 31.17 68.60 2.14 -2.48 16 19 C 0.04 0.07 10.44 83.68 0.87 0.95 16 20 N -0.49 -3.86 11.30 -194.11 -2.19 -6.05 16 21 C 0.22 1.49 7.59 134.18 1.02 2.51 16 22 C -0.08 -0.19 6.24 22.42 0.14 -0.05 16 23 Br 0.01 0.01 33.72 -20.37 -0.69 -0.67 16 24 C -0.02 0.07 9.26 22.55 0.21 0.28 16 25 C -0.12 0.53 7.15 31.12 0.22 0.75 16 26 H 0.42 -5.58 8.83 -92.71 -0.82 -6.40 16 27 H 0.40 -2.70 8.93 -92.71 -0.83 -3.52 16 28 H 0.09 -0.31 8.09 -2.39 -0.02 -0.33 16 29 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 30 H 0.42 -5.20 6.73 -92.71 -0.62 -5.82 16 31 H 0.19 0.78 6.19 -2.91 -0.02 0.76 16 32 H 0.11 -0.87 7.96 -2.38 -0.02 -0.89 16 33 H 0.41 -3.85 8.74 -74.05 -0.65 -4.49 16 34 H -0.31 -1.17 7.11 99.48 0.71 -0.47 16 35 H -0.27 0.69 7.11 99.48 0.71 1.40 16 36 H 0.23 -1.64 6.89 -2.91 -0.02 -1.66 16 37 H 0.19 -2.17 6.44 -2.91 -0.02 -2.19 16 38 H 0.10 -0.68 8.14 -2.39 -0.02 -0.70 16 39 H 0.09 0.06 7.44 -2.39 -0.02 0.05 16 Total: 0.00 -32.25 355.97 -3.64 -35.89 By element: Atomic # 1 Polarization: -25.36 SS G_CDS: -1.69 Total: -27.06 kcal Atomic # 6 Polarization: 4.16 SS G_CDS: 5.37 Total: 9.54 kcal Atomic # 7 Polarization: 4.12 SS G_CDS: -7.04 Total: -2.91 kcal Atomic # 8 Polarization: -10.57 SS G_CDS: -1.73 Total: -12.30 kcal Atomic # 14 Polarization: -4.62 SS G_CDS: 2.14 Total: -2.48 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.67 kcal Total: -32.25 -3.64 -35.89 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_12335884.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.047 kcal (2) G-P(sol) polarization free energy of solvation -32.250 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.797 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.639 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.890 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.157 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds