Wall clock time and date at job start Thu Mar 4 2021 13:19:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53008 * 109.46913 * 2 1 4 4 C 1.53002 * 109.46819 * 173.81235 * 3 2 1 5 5 C 1.52993 * 109.47233 * 293.81179 * 3 2 1 6 6 C 1.50697 * 109.47286 * 180.54496 * 5 3 2 7 7 O 1.21287 * 120.00311 * 118.15715 * 6 5 3 8 8 N 1.34783 * 120.00020 * 298.15236 * 6 5 3 9 9 C 1.46492 * 119.99961 * 175.57957 * 8 6 5 10 10 H 1.08997 * 112.85459 * 336.19828 * 9 8 6 11 11 C 1.53778 * 113.61696 * 107.50739 * 9 8 6 12 12 C 1.53782 * 87.08364 * 89.11184 * 11 9 8 13 13 H 1.08998 * 113.61280 * 270.88781 * 12 11 9 14 14 C 1.50702 * 113.69137 * 139.99104 * 12 11 9 15 15 N 1.34779 * 119.99674 * 82.46517 * 14 12 11 16 16 O 1.21270 * 120.00263 * 262.47054 * 14 12 11 17 17 C 1.53779 * 87.07900 * 25.43296 * 12 11 9 18 18 N 1.46503 * 109.47307 * 300.54633 * 5 3 2 19 19 C 1.36349 * 125.63239 * 294.93841 * 18 5 3 20 20 C 1.34854 * 108.21329 * 180.26471 * 19 18 5 21 21 C 1.40890 * 107.41931 * 359.73492 * 20 19 18 22 22 C 1.34852 * 107.41770 * 0.02562 * 21 20 19 23 23 C 1.50697 * 125.88685 * 180.02562 * 22 21 20 24 24 O 1.42898 * 109.46628 * 210.01997 * 23 22 21 25 25 Si 1.86294 * 109.47394 * 330.02131 * 23 22 21 26 26 H 1.08998 * 109.46955 * 185.00331 * 1 2 3 27 27 H 1.08998 * 109.46943 * 304.99687 * 1 2 3 28 28 H 1.08996 * 109.47120 * 64.99647 * 1 2 3 29 29 H 1.09004 * 109.47452 * 240.00467 * 2 1 3 30 30 H 1.08997 * 109.47756 * 120.00062 * 2 1 3 31 31 H 1.08999 * 109.46976 * 53.81570 * 3 2 1 32 32 H 1.09001 * 109.46689 * 171.40614 * 4 3 2 33 33 H 1.08995 * 109.47475 * 291.40163 * 4 3 2 34 34 H 1.09001 * 109.47447 * 51.40613 * 4 3 2 35 35 H 1.09005 * 109.47071 * 60.54283 * 5 3 2 36 36 H 0.96996 * 119.99377 * 355.58140 * 8 6 5 37 37 H 1.08996 * 113.61617 * 203.66338 * 11 9 8 38 38 H 1.09004 * 113.61519 * 334.56582 * 11 9 8 39 39 H 0.97003 * 119.99693 * 0.02562 * 15 14 12 40 40 H 0.96997 * 120.00197 * 179.97438 * 15 14 12 41 41 H 1.08997 * 113.61578 * 220.01672 * 17 12 11 42 42 H 1.09008 * 113.68919 * 89.12475 * 17 12 11 43 43 H 1.08000 * 125.89033 * 359.97438 * 19 18 5 44 44 H 1.08000 * 126.28474 * 179.75622 * 20 19 18 45 45 H 1.08003 * 126.28920 * 180.02562 * 21 20 19 46 46 H 1.09002 * 109.47295 * 90.02711 * 23 22 21 47 47 H 0.96708 * 113.99755 * 179.97438 * 24 23 22 48 48 H 1.48496 * 110.00215 * 178.68292 * 25 23 22 49 49 H 1.48502 * 110.00104 * 300.00476 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 3.5621 1.4454 0.1555 5 6 1.6609 2.1175 -1.3196 6 6 2.1748 3.5342 -1.3251 7 8 2.9865 3.8817 -2.1567 8 7 1.7324 4.4151 -0.4060 9 6 2.3024 5.7634 -0.3498 10 1 3.3039 5.8177 -0.7764 11 6 1.3513 6.8563 -0.8651 12 6 0.8205 6.9630 0.5742 13 1 -0.0087 6.2877 0.7850 14 6 0.5499 8.3780 1.0165 15 7 -0.6103 8.9778 0.6838 16 8 1.3760 8.9771 1.6717 17 6 2.1856 6.4244 1.0338 18 7 2.2563 1.3778 -2.4352 19 6 3.5913 1.2493 -2.6807 20 6 3.7454 0.5052 -3.7947 21 6 2.4586 0.1565 -4.2503 22 6 1.5671 0.7013 -3.3977 23 6 0.0677 0.5864 -3.4948 24 8 -0.5366 1.7551 -2.9371 25 14 -0.4282 0.4240 -5.2832 26 1 -0.3633 -1.0237 0.0896 27 1 -0.3633 0.5894 0.8418 28 1 -0.3633 0.4344 -0.9313 29 1 1.8934 -0.5138 -0.8900 30 1 1.8935 -0.5138 0.8899 31 1 1.5891 1.9873 0.8294 32 1 3.9409 2.4560 0.0032 33 1 3.8257 1.1057 1.1570 34 1 4.0040 0.7765 -0.5831 35 1 0.5761 2.1241 -1.4259 36 1 1.0366 4.1562 0.2183 37 1 1.8639 7.7546 -1.2092 38 1 0.6114 6.4910 -1.5774 39 1 -1.2712 8.4985 0.1599 40 1 -0.7847 9.8884 0.9687 41 1 2.1194 5.7103 1.8546 42 1 2.9273 7.2036 1.2094 43 1 4.3878 1.6745 -2.0881 44 1 4.6829 0.2273 -4.2532 45 1 2.2284 -0.4379 -5.1223 46 1 -0.2658 -0.2931 -2.9440 47 1 -1.5033 1.7500 -2.9662 48 1 -1.9021 0.2780 -5.3904 49 1 0.0207 1.6170 -6.0451 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_12360566.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:19:12 Heat of formation + Delta-G solvation = -25.969074 kcal Electronic energy + Delta-G solvation = -31405.310754 eV Core-core repulsion = 27335.845349 eV Total energy + Delta-G solvation = -4069.465405 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.188 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.76357 -41.64146 -40.29757 -38.60981 -38.02863 -37.57849 -34.72037 -34.24596 -32.94591 -31.55629 -30.65474 -28.56047 -27.01927 -26.90474 -25.90728 -24.74491 -22.74032 -22.17250 -21.67872 -21.38830 -20.40122 -19.89658 -18.87641 -18.57567 -18.36073 -17.83751 -17.54970 -16.89904 -16.79401 -16.48361 -16.08471 -15.82519 -15.46457 -15.30878 -15.04420 -14.74645 -14.66689 -14.60498 -14.38803 -14.23444 -13.78386 -13.71760 -13.60992 -13.38851 -13.21094 -13.08876 -12.94837 -12.82888 -12.70117 -12.26001 -11.99612 -11.92959 -11.91480 -11.86516 -11.75393 -11.67944 -10.99447 -10.91079 -10.74647 -10.68184 -10.20499 -9.34537 -8.65764 -4.92659 1.05390 1.44530 1.50456 1.55785 1.63201 1.79314 2.01835 2.29457 2.34383 2.47329 2.95634 3.21841 3.29966 3.35209 3.50113 3.61104 3.69311 3.70875 3.78058 3.94231 4.02693 4.14479 4.26631 4.32307 4.35318 4.41983 4.50601 4.52289 4.56904 4.58387 4.66795 4.69692 4.74461 4.76250 4.84631 4.87649 4.93766 4.95104 4.99643 5.12560 5.13656 5.27210 5.40891 5.53427 5.57449 5.71907 6.13269 6.24151 6.25931 6.31847 6.48592 6.59697 7.06751 7.20945 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C -0.119 4.119 3 C -0.096 4.096 4 C -0.166 4.166 5 C 0.112 3.888 6 C 0.512 3.488 7 O -0.514 6.514 8 N -0.711 5.711 9 C 0.122 3.878 10 H 0.110 0.890 11 C -0.133 4.133 12 C -0.142 4.142 13 H 0.113 0.887 14 C 0.526 3.474 15 N -0.855 5.855 16 O -0.540 6.540 17 C -0.121 4.121 18 N -0.409 5.409 19 C 0.019 3.981 20 C -0.204 4.204 21 C -0.187 4.187 22 C 0.022 3.978 23 C -0.048 4.048 24 O -0.544 6.544 25 Si 0.707 3.293 26 H 0.058 0.942 27 H 0.054 0.946 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.069 0.931 31 H 0.087 0.913 32 H 0.056 0.944 33 H 0.064 0.936 34 H 0.074 0.926 35 H 0.150 0.850 36 H 0.401 0.599 37 H 0.097 0.903 38 H 0.080 0.920 39 H 0.402 0.598 40 H 0.402 0.598 41 H 0.081 0.919 42 H 0.112 0.888 43 H 0.160 0.840 44 H 0.137 0.863 45 H 0.144 0.856 46 H 0.078 0.922 47 H 0.381 0.619 48 H -0.261 1.261 49 H -0.254 1.254 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.055 -4.113 1.550 7.482 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.219 4.219 2 C -0.156 4.156 3 C -0.115 4.115 4 C -0.223 4.223 5 C 0.005 3.995 6 C 0.297 3.703 7 O -0.388 6.388 8 N -0.364 5.364 9 C 0.017 3.983 10 H 0.128 0.872 11 C -0.172 4.172 12 C -0.163 4.163 13 H 0.131 0.869 14 C 0.311 3.689 15 N -0.418 5.418 16 O -0.416 6.416 17 C -0.159 4.159 18 N -0.084 5.084 19 C -0.110 4.110 20 C -0.227 4.227 21 C -0.212 4.212 22 C -0.088 4.088 23 C -0.157 4.157 24 O -0.352 6.352 25 Si 0.606 3.394 26 H 0.077 0.923 27 H 0.073 0.927 28 H 0.079 0.921 29 H 0.091 0.909 30 H 0.088 0.912 31 H 0.105 0.895 32 H 0.075 0.925 33 H 0.083 0.917 34 H 0.093 0.907 35 H 0.167 0.833 36 H 0.235 0.765 37 H 0.116 0.884 38 H 0.099 0.901 39 H 0.230 0.770 40 H 0.233 0.767 41 H 0.099 0.901 42 H 0.130 0.870 43 H 0.178 0.822 44 H 0.155 0.845 45 H 0.161 0.839 46 H 0.096 0.904 47 H 0.230 0.770 48 H -0.187 1.187 49 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges -4.776 -2.947 1.063 5.712 hybrid contribution -1.691 0.804 0.976 2.111 sum -6.467 -2.144 2.039 7.111 Atomic orbital electron populations 1.21936 0.95644 1.02210 1.02061 1.21563 0.96100 0.94816 1.03162 1.21544 0.97803 0.97704 0.94439 1.22225 0.94325 1.02565 1.03167 1.21735 1.02180 0.88320 0.87253 1.20660 0.81682 0.87093 0.80835 1.90793 1.32810 1.78894 1.36279 1.45593 1.42019 1.12505 1.36253 1.21817 0.98463 0.80774 0.97265 0.87236 1.23353 0.99648 1.00021 0.94187 1.22858 1.00136 0.94212 0.99106 0.86916 1.20443 0.81289 0.88577 0.78594 1.43913 1.20107 1.19315 1.58452 1.90767 1.45720 1.66233 1.38874 1.23245 0.96015 1.00333 0.96327 1.43346 1.05639 1.39057 1.20402 1.21847 0.84759 1.03943 1.00488 1.20801 0.97624 1.05820 0.98499 1.20483 0.92270 1.07229 1.01203 1.19548 0.91153 1.04296 0.93809 1.24457 0.90483 0.89556 1.11246 1.86414 1.24971 1.41892 1.81966 0.94369 0.80416 0.89098 0.75507 0.92329 0.92703 0.92075 0.90920 0.91203 0.89452 0.92504 0.91684 0.90678 0.83266 0.76483 0.88435 0.90083 0.76998 0.76705 0.90064 0.87007 0.82233 0.84488 0.83895 0.90424 0.76975 1.18654 1.17786 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 0.41 9.57 37.16 0.36 0.76 16 2 C -0.12 0.18 5.31 -26.73 -0.14 0.04 16 3 C -0.10 0.15 2.19 -90.62 -0.20 -0.05 16 4 C -0.17 0.10 7.71 37.16 0.29 0.39 16 5 C 0.11 0.02 2.18 -69.09 -0.15 -0.14 16 6 C 0.51 0.85 5.67 -10.98 -0.06 0.78 16 7 O -0.51 -3.05 14.78 5.55 0.08 -2.97 16 8 N -0.71 1.04 5.15 -53.02 -0.27 0.77 16 9 C 0.12 -0.09 4.30 -67.12 -0.29 -0.38 16 10 H 0.11 0.14 7.52 -51.93 -0.39 -0.25 16 11 C -0.13 0.18 7.43 -25.92 -0.19 -0.01 16 12 C -0.14 0.30 4.02 -90.96 -0.37 -0.07 16 13 H 0.11 -0.50 8.14 -51.93 -0.42 -0.92 16 14 C 0.53 0.31 7.63 -10.98 -0.08 0.23 16 15 N -0.85 2.14 8.87 31.22 0.28 2.42 16 16 O -0.54 -2.87 16.74 5.57 0.09 -2.78 16 17 C -0.12 0.16 7.15 -25.92 -0.19 -0.03 16 18 N -0.41 -0.88 1.62 -106.71 -0.17 -1.05 16 19 C 0.02 0.06 7.47 -16.74 -0.13 -0.06 16 20 C -0.20 -0.61 10.86 -39.78 -0.43 -1.04 16 21 C -0.19 -0.39 9.43 -39.78 -0.37 -0.77 16 22 C 0.02 0.04 5.94 -81.79 -0.49 -0.44 16 23 C -0.05 0.04 2.28 36.00 0.08 0.12 16 24 O -0.54 0.68 8.91 -35.23 -0.31 0.37 16 25 Si 0.71 -0.60 31.14 -169.99 -5.29 -5.89 16 26 H 0.06 -0.14 8.14 -51.93 -0.42 -0.56 16 27 H 0.05 -0.17 8.14 -51.93 -0.42 -0.60 16 28 H 0.06 -0.15 4.48 -51.93 -0.23 -0.38 16 29 H 0.07 0.02 7.18 -51.93 -0.37 -0.36 16 30 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.09 -0.29 7.81 -51.93 -0.41 -0.69 16 32 H 0.06 0.03 6.87 -51.93 -0.36 -0.32 16 33 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 34 H 0.07 0.02 5.40 -51.93 -0.28 -0.26 16 35 H 0.15 -0.10 3.76 -51.93 -0.20 -0.30 16 36 H 0.40 -1.66 8.41 -40.82 -0.34 -2.00 16 37 H 0.10 -0.06 8.10 -51.93 -0.42 -0.48 16 38 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.40 -2.13 8.83 -40.82 -0.36 -2.49 16 40 H 0.40 -1.09 8.93 -40.82 -0.36 -1.46 16 41 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 42 H 0.11 0.05 7.44 -51.92 -0.39 -0.34 16 43 H 0.16 0.44 6.32 -52.49 -0.33 0.11 16 44 H 0.14 0.22 8.06 -52.49 -0.42 -0.20 16 45 H 0.14 -0.06 6.89 -52.48 -0.36 -0.42 16 46 H 0.08 -0.20 7.33 -51.93 -0.38 -0.58 16 47 H 0.38 -1.98 8.74 45.56 0.40 -1.58 16 48 H -0.26 -0.12 7.11 56.52 0.40 0.29 16 49 H -0.25 -0.92 7.11 56.52 0.40 -0.52 16 LS Contribution 379.59 15.07 5.72 5.72 Total: 0.00 -10.97 379.59 -9.61 -20.57 By element: Atomic # 1 Polarization: -9.14 SS G_CDS: -7.36 Total: -16.50 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: -2.36 Total: -0.65 kcal Atomic # 7 Polarization: 2.30 SS G_CDS: -0.17 Total: 2.14 kcal Atomic # 8 Polarization: -5.24 SS G_CDS: -0.14 Total: -5.38 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: -5.29 Total: -5.89 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -10.97 -9.61 -20.57 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_12360566.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.396 kcal (2) G-P(sol) polarization free energy of solvation -10.966 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.362 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.607 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.573 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.969 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds