Wall clock time and date at job start Thu Mar 4 2021 13:19:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21282 * 120.00040 * 2 1 4 4 C 1.50700 * 119.99783 * 180.02562 * 2 1 3 5 5 H 1.09001 * 112.84981 * 48.80668 * 4 2 1 6 6 C 1.53782 * 113.61485 * 179.97438 * 4 2 1 7 7 C 1.53769 * 87.08260 * 89.19934 * 6 4 2 8 8 H 1.09001 * 113.61824 * 270.80245 * 7 6 4 9 9 N 1.46503 * 113.61865 * 139.98058 * 7 6 4 10 10 C 1.34771 * 120.00411 * 156.53032 * 9 7 6 11 11 O 1.21568 * 119.99998 * 359.97438 * 10 9 7 12 12 C 1.47699 * 120.00307 * 180.02562 * 10 9 7 13 13 C 1.39617 * 120.15265 * 0.25234 * 12 10 9 14 14 C 1.38112 * 119.85123 * 180.27343 * 13 12 10 15 15 F 1.35104 * 119.91654 * 179.74636 * 14 13 12 16 16 C 1.38605 * 120.16335 * 359.47672 * 14 13 12 17 17 C 1.50706 * 119.84091 * 180.23067 * 16 14 13 18 18 O 1.42902 * 109.47000 * 74.99867 * 17 16 14 19 19 Si 1.86304 * 109.47031 * 194.99556 * 17 16 14 20 20 C 1.38225 * 120.31866 * 0.24659 * 16 14 13 21 21 C 1.38270 * 120.14391 * 0.03102 * 20 16 14 22 22 F 1.35104 * 120.08475 * 180.02562 * 21 20 16 23 23 C 1.53781 * 87.17505 * 25.39300 * 7 6 4 24 24 H 0.97004 * 120.00399 * 180.02562 * 1 2 3 25 25 H 0.97000 * 119.99828 * 359.97438 * 1 2 3 26 26 H 1.09004 * 113.60939 * 334.65293 * 6 4 2 27 27 H 1.09002 * 113.69006 * 203.76552 * 6 4 2 28 28 H 0.97006 * 119.99499 * 336.53252 * 9 7 6 29 29 H 1.08000 * 120.07498 * 0.02562 * 13 12 10 30 30 H 1.08993 * 109.47323 * 314.99873 * 17 16 14 31 31 H 0.96702 * 114.00303 * 59.99915 * 18 17 16 32 32 H 1.48492 * 109.99724 * 180.02562 * 19 17 16 33 33 H 1.48502 * 109.99706 * 301.31894 * 19 17 16 34 34 H 1.07998 * 119.93410 * 180.02562 * 20 16 14 35 35 H 1.08997 * 113.61881 * 89.15729 * 23 7 6 36 36 H 1.08999 * 113.61579 * 220.06487 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3051 -0.0006 5 1 1.7399 -2.0021 -0.7568 6 6 3.6295 -1.1342 -0.0011 7 6 3.5499 -1.1219 1.5344 8 1 3.4024 -0.1276 1.9561 9 7 4.6357 -1.8601 2.1844 10 6 4.9849 -1.5673 3.4527 11 8 4.3991 -0.6903 4.0574 12 6 6.0799 -2.3112 4.1078 13 6 6.7590 -3.3147 3.4142 14 6 7.7783 -4.0102 4.0346 15 9 8.4329 -4.9850 3.3664 16 6 8.1349 -3.7068 5.3392 17 6 9.2517 -4.4668 6.0074 18 8 10.5071 -4.0207 5.4908 19 14 9.1943 -4.1666 7.8452 20 6 7.4710 -2.7107 6.0304 21 6 6.4449 -2.0101 5.4237 22 9 5.7972 -1.0364 6.1002 23 6 2.2500 -1.9320 1.3977 24 1 -0.4851 -0.8400 0.0004 25 1 -0.4850 0.8401 0.0004 26 1 3.9628 -0.1885 -0.4286 27 1 4.1661 -1.9932 -0.4038 28 1 5.1034 -2.5596 1.7017 29 1 6.4853 -3.5493 2.3961 30 1 9.1353 -5.5323 5.8095 31 1 10.6784 -3.0794 5.6317 32 1 10.2910 -4.9101 8.5156 33 1 9.3201 -2.7139 8.1266 34 1 7.7543 -2.4791 7.0465 35 1 2.4075 -3.0104 1.3782 36 1 1.4713 -1.6295 2.0978 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_12360598.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:19:17 Heat of formation + Delta-G solvation = -138.520405 kcal Electronic energy + Delta-G solvation = -25620.963099 eV Core-core repulsion = 21322.597016 eV Total energy + Delta-G solvation = -4298.366083 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.096 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -50.12229 -50.08736 -41.87830 -40.99053 -39.90518 -38.39071 -37.75286 -34.97326 -34.58520 -33.08375 -31.38480 -28.27151 -26.78052 -26.72051 -24.41614 -23.99205 -22.74853 -21.92085 -20.49594 -19.61435 -18.85993 -18.74955 -18.06462 -17.97399 -17.93968 -17.37599 -17.07532 -16.95017 -16.60078 -16.26006 -16.11341 -15.90544 -15.82263 -15.63462 -15.50473 -15.22367 -14.76601 -14.32347 -14.14187 -13.82870 -13.58906 -13.32422 -13.19661 -13.06009 -12.97319 -12.40848 -11.93544 -11.88411 -11.69084 -11.24377 -10.99759 -10.78615 -10.69653 -10.61200 -10.20158 -9.82770 -4.96151 -0.82247 -0.31242 1.16018 1.36463 1.54248 1.54551 1.85013 1.91463 2.22203 2.54720 2.78440 2.84347 3.10373 3.24127 3.36047 3.41271 3.46728 3.52206 3.72261 3.78177 3.88655 4.16083 4.27614 4.31827 4.38264 4.49381 4.58589 4.68514 4.69176 4.72745 4.79699 4.86286 4.98343 5.04972 5.36972 5.42666 5.84550 6.31199 6.38328 6.43746 6.99210 7.31306 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.521 3.479 3 O -0.595 6.595 4 C -0.130 4.130 5 H 0.150 0.850 6 C -0.119 4.119 7 C 0.109 3.891 8 H 0.077 0.923 9 N -0.692 5.692 10 C 0.555 3.445 11 O -0.566 6.566 12 C -0.147 4.147 13 C -0.074 4.074 14 C 0.106 3.894 15 F -0.126 7.126 16 C -0.090 4.090 17 C -0.086 4.086 18 O -0.540 6.540 19 Si 0.773 3.227 20 C -0.130 4.130 21 C 0.137 3.863 22 F -0.127 7.127 23 C -0.121 4.121 24 H 0.419 0.581 25 H 0.405 0.595 26 H 0.066 0.934 27 H 0.134 0.866 28 H 0.419 0.581 29 H 0.185 0.815 30 H 0.134 0.866 31 H 0.390 0.610 32 H -0.294 1.294 33 H -0.273 1.273 34 H 0.170 0.830 35 H 0.131 0.869 36 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.398 -8.393 -2.762 9.467 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.307 3.693 3 O -0.476 6.476 4 C -0.152 4.152 5 H 0.167 0.833 6 C -0.157 4.157 7 C 0.004 3.996 8 H 0.095 0.905 9 N -0.345 5.345 10 C 0.342 3.658 11 O -0.445 6.445 12 C -0.151 4.151 13 C -0.093 4.093 14 C 0.086 3.914 15 F -0.104 7.104 16 C -0.092 4.092 17 C -0.194 4.194 18 O -0.348 6.348 19 Si 0.676 3.324 20 C -0.149 4.149 21 C 0.117 3.883 22 F -0.105 7.105 23 C -0.160 4.160 24 H 0.251 0.749 25 H 0.236 0.764 26 H 0.085 0.915 27 H 0.152 0.848 28 H 0.259 0.741 29 H 0.202 0.798 30 H 0.152 0.848 31 H 0.240 0.760 32 H -0.221 1.221 33 H -0.200 1.200 34 H 0.187 0.813 35 H 0.149 0.851 36 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -2.835 -7.529 -1.852 8.255 hybrid contribution 0.397 0.976 -0.687 1.258 sum -2.438 -6.553 -2.539 7.439 Atomic orbital electron populations 1.43764 1.06382 1.13839 1.76027 1.20729 0.83513 0.91066 0.74041 1.90764 1.69453 1.35575 1.51811 1.22257 0.96558 0.94706 1.01673 0.83263 1.23282 0.94570 1.04648 0.93246 1.22665 0.87340 0.95994 0.93601 0.90482 1.45710 1.36843 1.39300 1.12626 1.18196 0.82533 0.82394 0.82629 1.90877 1.55349 1.33251 1.65065 1.19813 1.00263 1.00919 0.94132 1.21360 0.93291 0.92840 1.01821 1.17321 0.93899 0.89707 0.90482 1.91579 1.79600 1.59536 1.79724 1.20443 0.98391 0.96880 0.93477 1.25296 0.81286 1.02353 1.10496 1.86655 1.35263 1.31804 1.81079 0.93846 0.87588 0.79159 0.71784 1.21089 0.95421 0.96006 1.02359 1.17843 0.92777 0.87958 0.89747 1.91602 1.79846 1.59780 1.79243 1.23452 0.96509 1.02102 0.93910 0.74896 0.76419 0.91542 0.84830 0.74091 0.79825 0.84780 0.76044 1.22136 1.19953 0.81278 0.85132 0.91321 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 4.33 8.87 -173.53 -1.54 2.79 16 2 C 0.52 0.99 7.36 87.66 0.65 1.63 16 3 O -0.60 -7.92 16.59 -3.04 -0.05 -7.97 16 4 C -0.13 0.78 4.34 -10.95 -0.05 0.74 16 5 H 0.15 -1.96 8.14 -2.39 -0.02 -1.97 16 6 C -0.12 0.51 7.20 31.12 0.22 0.74 16 7 C 0.11 0.03 3.87 45.51 0.18 0.21 16 8 H 0.08 0.79 7.43 -2.39 -0.02 0.77 16 9 N -0.69 1.67 5.31 -443.07 -2.35 -0.68 16 10 C 0.56 2.98 7.77 86.74 0.67 3.65 16 11 O -0.57 -8.98 14.96 -3.93 -0.06 -9.04 16 12 C -0.15 -0.14 5.88 -20.06 -0.12 -0.26 16 13 C -0.07 0.38 9.52 22.57 0.21 0.60 16 14 C 0.11 -0.30 7.23 22.33 0.16 -0.14 16 15 F -0.13 0.05 16.73 44.97 0.75 0.80 16 16 C -0.09 0.29 5.27 -19.78 -0.10 0.18 16 17 C -0.09 0.31 2.44 71.24 0.17 0.49 16 18 O -0.54 0.13 12.88 -148.98 -1.92 -1.79 16 19 Si 0.77 -3.82 30.23 68.60 2.07 -1.75 16 20 C -0.13 0.28 8.62 22.27 0.19 0.47 16 21 C 0.14 0.45 7.28 22.67 0.17 0.61 16 22 F -0.13 -1.25 15.55 44.97 0.70 -0.55 16 23 C -0.12 0.72 7.47 31.18 0.23 0.95 16 24 H 0.42 -5.14 8.83 -92.71 -0.82 -5.96 16 25 H 0.40 -2.01 8.93 -92.71 -0.83 -2.84 16 26 H 0.07 0.14 7.43 -2.38 -0.02 0.12 16 27 H 0.13 -1.58 8.11 -2.39 -0.02 -1.60 16 28 H 0.42 -4.49 6.74 -92.70 -0.63 -5.11 16 29 H 0.18 -2.32 6.40 -2.91 -0.02 -2.34 16 30 H 0.13 -0.68 7.89 -2.39 -0.02 -0.70 16 31 H 0.39 -2.46 8.70 -74.06 -0.64 -3.10 16 32 H -0.29 -0.80 7.11 99.48 0.71 -0.09 16 33 H -0.27 0.50 6.68 99.48 0.66 1.16 16 34 H 0.17 -0.85 4.83 -2.91 -0.01 -0.86 16 35 H 0.13 -1.53 8.14 -2.39 -0.02 -1.55 16 36 H 0.07 -0.21 8.10 -2.39 -0.02 -0.23 16 Total: 0.00 -31.11 318.85 -1.51 -32.62 By element: Atomic # 1 Polarization: -22.59 SS G_CDS: -1.71 Total: -24.30 kcal Atomic # 6 Polarization: 7.28 SS G_CDS: 2.59 Total: 9.87 kcal Atomic # 7 Polarization: 6.00 SS G_CDS: -3.89 Total: 2.11 kcal Atomic # 8 Polarization: -16.77 SS G_CDS: -2.03 Total: -18.80 kcal Atomic # 9 Polarization: -1.21 SS G_CDS: 1.45 Total: 0.25 kcal Atomic # 14 Polarization: -3.82 SS G_CDS: 2.07 Total: -1.75 kcal Total: -31.11 -1.51 -32.62 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_12360598.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.899 kcal (2) G-P(sol) polarization free energy of solvation -31.107 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.005 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.515 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.622 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.520 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds