Wall clock time and date at job start Thu Mar 4 2021 13:19:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35654 * 117.00303 * 2 1 4 4 C 1.40137 * 120.15140 * 179.97438 * 3 2 1 5 5 C 1.47531 * 120.19158 * 0.03822 * 4 3 2 6 6 O 1.21595 * 119.99987 * 0.02562 * 5 4 3 7 7 N 1.34778 * 120.00323 * 179.97438 * 5 4 3 8 8 C 1.46498 * 120.00276 * 180.02562 * 7 5 4 9 9 H 1.08996 * 112.85112 * 25.34271 * 8 7 5 10 10 C 1.53782 * 113.61316 * 156.53276 * 8 7 5 11 11 C 1.53772 * 87.08168 * 139.98455 * 10 8 7 12 12 H 1.09002 * 113.61946 * 219.93550 * 11 10 8 13 13 C 1.50698 * 113.61595 * 89.11719 * 11 10 8 14 14 N 1.34784 * 120.00118 * 180.02562 * 13 11 10 15 15 O 1.21284 * 119.99978 * 359.97438 * 13 11 10 16 16 C 1.53774 * 113.61783 * 254.14244 * 8 7 5 17 17 C 1.39708 * 119.61715 * 179.77338 * 4 3 2 18 18 C 1.37787 * 119.90633 * 0.52553 * 17 4 3 19 19 C 1.50698 * 119.84984 * 179.75385 * 18 17 4 20 20 O 1.42895 * 109.47614 * 64.72009 * 19 18 17 21 21 Si 1.86300 * 109.47338 * 184.72009 * 19 18 17 22 22 C 1.38548 * 120.30326 * 359.46563 * 18 17 4 23 23 C 1.38065 * 120.38604 * 0.26527 * 22 18 17 24 24 H 1.08996 * 109.47532 * 180.02562 * 1 2 3 25 25 H 1.09004 * 109.47158 * 300.00153 * 1 2 3 26 26 H 1.09001 * 109.46791 * 59.99948 * 1 2 3 27 27 H 0.96996 * 119.99729 * 0.02562 * 7 5 4 28 28 H 1.09005 * 113.61516 * 254.53396 * 10 8 7 29 29 H 1.09000 * 113.61659 * 25.34884 * 10 8 7 30 30 H 0.97002 * 119.99586 * 0.02562 * 14 13 11 31 31 H 0.96992 * 119.99675 * 179.97438 * 14 13 11 32 32 H 1.09002 * 113.61437 * 334.56647 * 16 8 7 33 33 H 1.08994 * 113.62129 * 105.47132 * 16 8 7 34 34 H 1.08001 * 120.04954 * 180.24858 * 17 4 3 35 35 H 1.09001 * 109.47122 * 304.72084 * 19 18 17 36 36 H 0.96698 * 114.00355 * 180.02562 * 20 19 18 37 37 H 1.48506 * 110.00048 * 300.00058 * 21 19 18 38 38 H 1.48502 * 109.99996 * 61.31383 * 21 19 18 39 39 H 1.07994 * 119.81068 * 180.27620 * 22 18 17 40 40 H 1.08002 * 119.95246 * 179.97438 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4442 1.2856 0.0005 5 6 4.2550 0.0531 0.0003 6 8 3.7094 -1.0336 -0.0009 7 7 5.6005 0.1316 0.0003 8 6 6.4056 -1.0923 -0.0006 9 1 5.8799 -1.9446 -0.4310 10 6 7.8240 -0.8962 -0.5616 11 6 8.3116 -1.8286 0.5597 12 1 9.2520 -1.5134 1.0119 13 6 8.3058 -3.2864 0.1779 14 7 8.7086 -4.2172 1.0656 15 8 7.9377 -3.6222 -0.9279 16 6 7.0659 -1.3963 1.3545 17 6 4.0669 2.5362 -0.0043 18 6 3.3039 3.6836 0.0015 19 6 3.9769 5.0319 0.0019 20 8 4.6996 5.2041 -1.2188 21 14 2.6887 6.3691 0.1547 22 6 1.9207 3.6034 0.0008 23 6 1.2925 2.3739 -0.0001 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3634 0.5139 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 6.0357 0.9984 0.0008 28 1 7.9588 -1.3083 -1.5617 29 1 8.1915 0.1260 -0.4720 30 1 9.0019 -3.9487 1.9504 31 1 8.7045 -5.1555 0.8199 32 1 7.2264 -0.5114 1.9703 33 1 6.5898 -2.2115 1.8992 34 1 5.1448 2.6037 -0.0079 35 1 4.6663 5.0936 0.8439 36 1 5.1593 6.0520 -1.2876 37 1 1.7425 6.2957 -0.9876 38 1 1.9515 6.2201 1.4351 39 1 1.3305 4.5077 0.0008 40 1 0.2139 2.3195 -0.0001 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_12496546.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:19:21 Heat of formation + Delta-G solvation = -79.178182 kcal Electronic energy + Delta-G solvation = -25228.512308 eV Core-core repulsion = 21397.407637 eV Total energy + Delta-G solvation = -3831.104671 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.130 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.87768 -41.36292 -39.81038 -39.11208 -38.12464 -37.23545 -34.69202 -34.36106 -32.53103 -31.93926 -28.64938 -27.18811 -26.79081 -26.15436 -25.02121 -23.08897 -22.18579 -21.34286 -20.32723 -19.41197 -18.53567 -18.21389 -18.13131 -18.00893 -17.53769 -16.90872 -16.79227 -16.24606 -16.01814 -15.86915 -15.61988 -15.42878 -15.35295 -14.85740 -14.50714 -14.19553 -14.09958 -13.92916 -13.68482 -13.47597 -13.22903 -13.00231 -12.96182 -12.51467 -12.28227 -12.09054 -11.94861 -11.80195 -11.62183 -10.88961 -10.71046 -10.65123 -10.36999 -10.22624 -9.92238 -9.27112 -5.05670 -0.25856 0.19103 1.19388 1.55605 1.62417 1.87310 1.87962 2.20428 2.23352 2.48356 2.71365 3.27911 3.37959 3.40457 3.50709 3.57686 3.73435 3.79698 3.80632 3.98325 4.06788 4.17827 4.20729 4.21417 4.24218 4.43195 4.50468 4.55285 4.57503 4.63635 4.74458 4.82797 4.88040 4.99618 5.03869 5.17529 5.23894 5.47496 5.59859 5.80285 6.28999 6.33708 6.54106 6.60641 7.29422 7.39280 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.278 6.278 3 C 0.193 3.807 4 C -0.173 4.173 5 C 0.563 3.437 6 O -0.513 6.513 7 N -0.720 5.720 8 C 0.126 3.874 9 H 0.121 0.879 10 C -0.127 4.127 11 C -0.140 4.140 12 H 0.111 0.889 13 C 0.533 3.467 14 N -0.853 5.853 15 O -0.536 6.536 16 C -0.136 4.136 17 C -0.016 4.016 18 C -0.124 4.124 19 C -0.065 4.065 20 O -0.546 6.546 21 Si 0.681 3.319 22 C -0.054 4.054 23 C -0.212 4.212 24 H 0.106 0.894 25 H 0.058 0.942 26 H 0.058 0.942 27 H 0.399 0.601 28 H 0.092 0.908 29 H 0.096 0.904 30 H 0.403 0.597 31 H 0.404 0.596 32 H 0.098 0.902 33 H 0.077 0.923 34 H 0.137 0.863 35 H 0.075 0.925 36 H 0.383 0.617 37 H -0.250 1.250 38 H -0.254 1.254 39 H 0.125 0.875 40 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.276 6.681 5.002 8.966 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.188 6.188 3 C 0.144 3.856 4 C -0.177 4.177 5 C 0.350 3.650 6 O -0.388 6.388 7 N -0.372 5.372 8 C 0.021 3.979 9 H 0.138 0.862 10 C -0.165 4.165 11 C -0.162 4.162 12 H 0.129 0.871 13 C 0.317 3.683 14 N -0.416 5.416 15 O -0.412 6.412 16 C -0.175 4.175 17 C -0.035 4.035 18 C -0.125 4.125 19 C -0.176 4.176 20 O -0.352 6.352 21 Si 0.582 3.418 22 C -0.071 4.071 23 C -0.231 4.231 24 H 0.125 0.875 25 H 0.076 0.924 26 H 0.077 0.923 27 H 0.234 0.766 28 H 0.111 0.889 29 H 0.114 0.886 30 H 0.231 0.769 31 H 0.235 0.765 32 H 0.116 0.884 33 H 0.096 0.904 34 H 0.155 0.845 35 H 0.093 0.907 36 H 0.231 0.769 37 H -0.175 1.175 38 H -0.179 1.179 39 H 0.143 0.857 40 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 1.562 5.216 4.197 6.875 hybrid contribution 0.292 -0.167 0.542 0.638 sum 1.855 5.049 4.739 7.169 Atomic orbital electron populations 1.23242 0.78203 1.04809 1.01410 1.86387 1.21191 1.25052 1.86169 1.19062 0.90980 0.84970 0.90541 1.19359 0.90887 0.93946 1.13525 1.17954 0.82014 0.88561 0.76468 1.90853 1.71495 1.28559 1.47923 1.45863 1.05810 1.09352 1.76219 1.22596 0.90356 0.88846 0.96063 0.86153 1.23233 0.94240 0.99364 0.99659 1.22262 1.01074 0.92322 1.00507 0.87118 1.20087 0.75963 0.87780 0.84484 1.43821 1.69623 1.10474 1.17704 1.90785 1.46558 1.82279 1.21535 1.23470 0.94123 1.02422 0.97492 1.20945 0.99874 0.89698 0.92949 1.19106 0.92824 0.94034 1.06497 1.24574 1.02952 1.00250 0.89827 1.86500 1.69365 1.42339 1.37038 0.95240 0.79688 0.86335 0.80515 1.20876 0.93845 0.97158 0.95262 1.21180 1.00718 0.91462 1.09754 0.87541 0.92364 0.92325 0.76565 0.88941 0.88590 0.76916 0.76531 0.88376 0.90385 0.84508 0.90686 0.76939 1.17510 1.17912 0.85743 0.84165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.28 -1.39 8.57 -40.54 -0.35 -1.74 16 3 C 0.19 0.80 6.70 -38.70 -0.26 0.54 16 4 C -0.17 -0.65 5.89 -104.85 -0.62 -1.27 16 5 C 0.56 2.79 7.76 -12.47 -0.10 2.69 16 6 O -0.51 -4.60 14.78 -16.60 -0.25 -4.84 16 7 N -0.72 -1.00 5.31 -54.06 -0.29 -1.29 16 8 C 0.13 0.21 3.86 -67.12 -0.26 -0.05 16 9 H 0.12 0.63 7.42 -51.93 -0.39 0.25 16 10 C -0.13 0.04 7.20 -25.92 -0.19 -0.15 16 11 C -0.14 0.16 4.35 -90.87 -0.40 -0.23 16 12 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 13 C 0.53 0.87 7.35 -10.98 -0.08 0.79 16 14 N -0.85 1.47 8.87 31.22 0.28 1.75 16 15 O -0.54 -3.43 16.58 5.55 0.09 -3.34 16 16 C -0.14 0.11 7.47 -25.83 -0.19 -0.08 16 17 C -0.02 -0.02 9.16 -39.20 -0.36 -0.38 16 18 C -0.12 -0.18 5.38 -104.67 -0.56 -0.74 16 19 C -0.07 0.08 2.79 36.00 0.10 0.18 16 20 O -0.55 0.58 12.80 -35.23 -0.45 0.13 16 21 Si 0.68 -1.32 29.84 -169.99 -5.07 -6.39 16 22 C -0.05 -0.10 8.65 -39.53 -0.34 -0.44 16 23 C -0.21 -0.44 9.03 -39.47 -0.36 -0.80 16 24 H 0.11 -0.06 8.14 -51.93 -0.42 -0.49 16 25 H 0.06 -0.06 7.66 -51.93 -0.40 -0.46 16 26 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 27 H 0.40 -0.64 6.74 -40.82 -0.28 -0.91 16 28 H 0.09 0.17 7.43 -51.93 -0.39 -0.22 16 29 H 0.10 -0.27 8.11 -51.93 -0.42 -0.69 16 30 H 0.40 -1.90 8.83 -40.82 -0.36 -2.26 16 31 H 0.40 -0.81 8.93 -40.82 -0.36 -1.17 16 32 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 33 H 0.08 0.00 8.09 -51.93 -0.42 -0.42 16 34 H 0.14 -0.19 6.40 -52.49 -0.34 -0.53 16 35 H 0.08 -0.24 7.96 -51.93 -0.41 -0.66 16 36 H 0.38 -2.29 8.74 45.56 0.40 -1.89 16 37 H -0.25 -0.32 7.04 56.52 0.40 0.08 16 38 H -0.25 -0.13 7.11 56.52 0.40 0.28 16 39 H 0.13 0.11 4.84 -52.49 -0.25 -0.15 16 40 H 0.14 -0.03 6.30 -52.49 -0.33 -0.36 16 LS Contribution 335.87 15.07 5.06 5.06 Total: 0.00 -12.75 335.87 -8.40 -21.15 By element: Atomic # 1 Polarization: -6.73 SS G_CDS: -4.81 Total: -11.55 kcal Atomic # 6 Polarization: 3.68 SS G_CDS: -2.62 Total: 1.07 kcal Atomic # 7 Polarization: 0.47 SS G_CDS: -0.01 Total: 0.46 kcal Atomic # 8 Polarization: -8.85 SS G_CDS: -0.95 Total: -9.80 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.07 Total: -6.39 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -12.75 -8.40 -21.15 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_12496546.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.026 kcal (2) G-P(sol) polarization free energy of solvation -12.750 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.776 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.402 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.152 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.178 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds