Wall clock time and date at job start Thu Mar 4 2021 13:19:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34779 * 1 3 3 O 1.21282 * 120.00023 * 2 1 4 4 C 1.50700 * 120.00233 * 179.97438 * 2 1 3 5 5 H 1.08992 * 112.84884 * 48.80851 * 4 2 1 6 6 C 1.53776 * 113.61561 * 180.02562 * 4 2 1 7 7 C 1.53784 * 87.08293 * 89.11668 * 6 4 2 8 8 H 1.09001 * 113.61507 * 270.80079 * 7 6 4 9 9 N 1.46498 * 113.61507 * 139.97795 * 7 6 4 10 10 C 1.34777 * 119.99828 * 156.25317 * 9 7 6 11 11 O 1.21573 * 119.99937 * 0.28077 * 10 9 7 12 12 C 1.47726 * 120.00147 * 180.27844 * 10 9 7 13 13 C 1.39627 * 120.11765 * 359.72611 * 12 10 9 14 14 C 1.37864 * 119.88192 * 179.67621 * 13 12 10 15 15 C 1.38633 * 120.11128 * 0.62177 * 14 13 12 16 16 F 1.35101 * 119.87634 * 179.69776 * 15 14 13 17 17 C 1.38671 * 120.24354 * 359.67649 * 15 14 13 18 18 C 1.50703 * 119.94305 * 180.02562 * 17 15 14 19 19 O 1.42907 * 109.46487 * 74.97786 * 18 17 15 20 20 Si 1.86303 * 109.47249 * 314.98115 * 18 17 15 21 21 C 1.37819 * 120.11991 * 0.02562 * 17 15 14 22 22 C 1.53781 * 87.17096 * 25.39168 * 7 6 4 23 23 H 0.97001 * 119.99723 * 180.02562 * 1 2 3 24 24 H 0.97002 * 120.00141 * 0.02562 * 1 2 3 25 25 H 1.09000 * 113.61546 * 334.56867 * 6 4 2 26 26 H 1.08999 * 113.61714 * 203.66534 * 6 4 2 27 27 H 0.97001 * 120.00384 * 336.53764 * 9 7 6 28 28 H 1.08003 * 120.05978 * 359.97438 * 13 12 10 29 29 H 1.07997 * 119.94247 * 180.30068 * 14 13 12 30 30 H 1.08999 * 109.47257 * 194.97784 * 18 17 15 31 31 H 0.96693 * 114.00349 * 299.99964 * 19 18 17 32 32 H 1.48504 * 109.99660 * 58.67805 * 20 18 17 33 33 H 1.48496 * 109.99936 * 179.97438 * 20 18 17 34 34 H 1.07998 * 120.06245 * 179.97438 * 21 17 15 35 35 H 1.08995 * 113.61680 * 89.16196 * 22 7 6 36 36 H 1.09006 * 113.61326 * 220.06146 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 1 1.7401 -2.0027 -0.7549 6 6 3.6296 -1.1340 0.0011 7 6 3.5486 -1.1188 1.5368 8 1 3.4006 -0.1238 1.9564 9 7 4.6338 -1.8558 2.1890 10 6 4.9854 -1.5568 3.4553 11 8 4.3987 -0.6790 4.0579 12 6 6.0838 -2.2957 4.1109 13 6 6.7556 -3.3082 3.4230 14 6 7.7843 -3.9902 4.0372 15 6 8.1436 -3.6808 5.3400 16 9 9.1485 -4.3563 5.9394 17 6 7.4757 -2.6804 6.0299 18 6 7.8723 -2.3493 7.4456 19 8 9.0983 -1.6151 7.4374 20 14 8.0990 -3.9259 8.4119 21 6 6.4499 -1.9883 5.4232 22 6 2.2488 -1.9293 1.4002 23 1 -0.4850 -0.8401 0.0004 24 1 -0.4850 0.8400 -0.0004 25 1 3.9633 -0.1892 -0.4278 26 1 4.1654 -1.9946 -0.3993 27 1 5.1020 -2.5561 1.7081 28 1 6.4729 -3.5535 2.4099 29 1 8.3078 -4.7702 3.5044 30 1 7.0914 -1.7474 7.9104 31 1 9.8390 -2.0909 7.0375 32 1 9.1388 -4.7698 7.7701 33 1 8.4908 -3.6130 9.8097 34 1 5.9301 -1.2096 5.9616 35 1 2.4064 -3.0076 1.3830 36 1 1.4694 -1.6255 2.0991 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_12496548.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:19:23 Heat of formation + Delta-G solvation = -90.632060 kcal Electronic energy + Delta-G solvation = -23110.251234 eV Core-core repulsion = 19283.415721 eV Total energy + Delta-G solvation = -3826.835513 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.105 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -50.46824 -41.85590 -41.01722 -39.68545 -38.32942 -37.79801 -34.88839 -34.52450 -32.82680 -31.87179 -27.41206 -26.89309 -26.71396 -24.81575 -23.52665 -22.73441 -21.56466 -20.35510 -19.22042 -18.90288 -18.34373 -18.02984 -17.89939 -17.73084 -17.15849 -17.01688 -16.33583 -16.16207 -15.87817 -15.63744 -15.60526 -15.21362 -15.02992 -14.72371 -14.29983 -14.03283 -13.87584 -13.60965 -13.38642 -13.23067 -13.03116 -12.95451 -12.36087 -11.84642 -11.65280 -11.35151 -11.19916 -10.98075 -10.86673 -10.68447 -10.22792 -10.11404 -9.81540 -4.97435 -0.52010 0.02156 1.19068 1.54317 1.56845 1.58562 1.93441 2.03993 2.54585 2.57010 2.96931 3.22582 3.39813 3.44774 3.45289 3.55750 3.61211 3.76762 3.90765 3.98215 4.10995 4.27763 4.33932 4.56018 4.63638 4.72390 4.76526 4.82974 4.88602 4.91132 4.98086 5.02464 5.07811 5.13376 5.47832 5.60368 5.85684 6.30124 6.44733 6.45773 7.12415 7.32689 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.521 3.479 3 O -0.596 6.596 4 C -0.131 4.131 5 H 0.149 0.851 6 C -0.119 4.119 7 C 0.109 3.891 8 H 0.074 0.926 9 N -0.695 5.695 10 C 0.557 3.443 11 O -0.582 6.582 12 C -0.153 4.153 13 C -0.037 4.037 14 C -0.145 4.145 15 C 0.109 3.891 16 F -0.130 7.130 17 C -0.156 4.156 18 C -0.086 4.086 19 O -0.544 6.544 20 Si 0.754 3.246 21 C -0.024 4.024 22 C -0.120 4.120 23 H 0.419 0.581 24 H 0.405 0.595 25 H 0.064 0.936 26 H 0.134 0.866 27 H 0.420 0.580 28 H 0.179 0.821 29 H 0.174 0.826 30 H 0.127 0.873 31 H 0.384 0.616 32 H -0.250 1.250 33 H -0.308 1.308 34 H 0.135 0.865 35 H 0.131 0.869 36 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.002 -10.175 -6.316 12.627 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.306 3.694 3 O -0.477 6.477 4 C -0.153 4.153 5 H 0.167 0.833 6 C -0.158 4.158 7 C 0.004 3.996 8 H 0.093 0.907 9 N -0.347 5.347 10 C 0.346 3.654 11 O -0.463 6.463 12 C -0.156 4.156 13 C -0.055 4.055 14 C -0.163 4.163 15 C 0.090 3.910 16 F -0.108 7.108 17 C -0.157 4.157 18 C -0.194 4.194 19 O -0.352 6.352 20 Si 0.657 3.343 21 C -0.043 4.043 22 C -0.159 4.159 23 H 0.251 0.749 24 H 0.235 0.765 25 H 0.083 0.917 26 H 0.152 0.848 27 H 0.260 0.740 28 H 0.196 0.804 29 H 0.192 0.808 30 H 0.145 0.855 31 H 0.233 0.767 32 H -0.175 1.175 33 H -0.236 1.236 34 H 0.153 0.847 35 H 0.149 0.851 36 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -3.681 -9.087 -5.168 11.083 hybrid contribution 0.873 0.756 -0.216 1.174 sum -2.808 -8.332 -5.384 10.310 Atomic orbital electron populations 1.43769 1.06404 1.13821 1.76053 1.20760 0.83502 0.91118 0.74006 1.90763 1.69462 1.35623 1.51832 1.22266 0.96621 0.94641 1.01738 0.83310 1.23283 0.94492 1.04562 0.93421 1.22612 0.87543 0.95952 0.93507 0.90746 1.45713 1.36729 1.39196 1.13075 1.18495 0.82572 0.82108 0.82251 1.90808 1.56122 1.33945 1.65404 1.19973 0.99364 1.00536 0.95711 1.21538 0.92042 0.91173 1.00788 1.21427 0.99429 1.02893 0.92597 1.18117 0.87517 0.92350 0.93051 1.91556 1.58400 1.78539 1.82348 1.20129 0.99300 0.98070 0.98188 1.25213 0.89131 1.08726 0.96362 1.86625 1.19874 1.45008 1.83711 0.94620 0.88464 0.76826 0.74358 1.21008 0.93607 0.96288 0.93380 1.23448 0.96572 1.02138 0.93763 0.74900 0.76452 0.91718 0.84751 0.74040 0.80401 0.80819 0.85470 0.76727 1.17519 1.23621 0.84672 0.85074 0.91451 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 4.54 8.87 -173.53 -1.54 3.00 16 2 C 0.52 0.85 7.35 87.66 0.64 1.49 16 3 O -0.60 -7.82 16.58 -3.03 -0.05 -7.87 16 4 C -0.13 0.85 4.35 -10.95 -0.05 0.80 16 5 H 0.15 -2.02 8.14 -2.39 -0.02 -2.04 16 6 C -0.12 0.58 7.20 31.12 0.22 0.81 16 7 C 0.11 -0.04 3.87 45.52 0.18 0.14 16 8 H 0.07 0.74 7.42 -2.39 -0.02 0.72 16 9 N -0.70 2.47 5.31 -443.01 -2.35 0.12 16 10 C 0.56 2.24 7.77 86.75 0.67 2.92 16 11 O -0.58 -8.43 15.96 -3.95 -0.06 -8.50 16 12 C -0.15 0.05 5.87 -20.09 -0.12 -0.07 16 13 C -0.04 0.29 9.54 22.52 0.21 0.50 16 14 C -0.15 0.95 10.01 22.28 0.22 1.18 16 15 C 0.11 -0.14 6.62 22.47 0.15 0.01 16 16 F -0.13 -0.13 12.57 44.97 0.57 0.44 16 17 C -0.16 -0.14 4.78 -19.86 -0.09 -0.23 16 18 C -0.09 -0.17 2.81 71.24 0.20 0.03 16 19 O -0.54 -3.06 12.88 -148.98 -1.92 -4.98 16 20 Si 0.75 0.40 30.81 68.60 2.11 2.52 16 21 C -0.02 -0.06 9.21 22.52 0.21 0.15 16 22 C -0.12 0.79 7.47 31.18 0.23 1.02 16 23 H 0.42 -5.26 8.83 -92.71 -0.82 -6.07 16 24 H 0.40 -2.09 8.93 -92.71 -0.83 -2.92 16 25 H 0.06 0.11 7.43 -2.39 -0.02 0.10 16 26 H 0.13 -1.71 8.11 -2.39 -0.02 -1.73 16 27 H 0.42 -5.13 6.74 -92.71 -0.62 -5.76 16 28 H 0.18 -2.91 6.40 -2.91 -0.02 -2.93 16 29 H 0.17 -2.06 8.06 -2.91 -0.02 -2.08 16 30 H 0.13 0.08 7.77 -2.39 -0.02 0.06 16 31 H 0.38 0.11 8.41 -74.06 -0.62 -0.51 16 32 H -0.25 -0.88 5.27 99.48 0.52 -0.36 16 33 H -0.31 -2.58 7.11 99.48 0.71 -1.88 16 34 H 0.14 0.65 7.58 -2.91 -0.02 0.63 16 35 H 0.13 -1.64 8.14 -2.39 -0.02 -1.66 16 36 H 0.07 -0.24 8.10 -2.38 -0.02 -0.26 16 Total: 0.00 -30.78 312.28 -2.42 -33.20 By element: Atomic # 1 Polarization: -24.81 SS G_CDS: -1.86 Total: -26.67 kcal Atomic # 6 Polarization: 6.05 SS G_CDS: 2.68 Total: 8.74 kcal Atomic # 7 Polarization: 7.01 SS G_CDS: -3.89 Total: 3.12 kcal Atomic # 8 Polarization: -19.31 SS G_CDS: -2.03 Total: -21.34 kcal Atomic # 9 Polarization: -0.13 SS G_CDS: 0.57 Total: 0.44 kcal Atomic # 14 Polarization: 0.40 SS G_CDS: 2.11 Total: 2.52 kcal Total: -30.78 -2.42 -33.20 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_12496548.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.428 kcal (2) G-P(sol) polarization free energy of solvation -30.785 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.213 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.420 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.204 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.632 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds