Wall clock time and date at job start Thu Mar 4 2021 13:19:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34773 * 1 3 3 O 1.21275 * 120.00214 * 2 1 4 4 C 1.50703 * 119.99826 * 179.97438 * 2 1 3 5 5 H 1.09001 * 112.84926 * 48.80662 * 4 2 1 6 6 C 1.53782 * 113.61208 * 180.02562 * 4 2 1 7 7 C 1.53777 * 87.08070 * 89.11748 * 6 4 2 8 8 H 1.08997 * 113.61711 * 270.79347 * 7 6 4 9 9 N 1.46507 * 113.61262 * 139.97858 * 7 6 4 10 10 C 1.34778 * 119.99816 * 156.52892 * 9 7 6 11 11 O 1.21283 * 119.99857 * 359.97438 * 10 9 7 12 12 C 1.50702 * 120.00026 * 180.02562 * 10 9 7 13 13 N 1.46494 * 109.47024 * 179.97438 * 12 10 9 14 14 C 1.35044 * 125.92830 * 125.00130 * 13 12 10 15 15 C 1.35090 * 107.97752 * 179.97438 * 14 13 12 16 16 C 1.50702 * 126.07077 * 180.02562 * 15 14 13 17 17 O 1.42898 * 109.46783 * 255.02393 * 16 15 14 18 18 Si 1.86300 * 109.47301 * 15.02325 * 16 15 14 19 19 C 1.40837 * 107.84943 * 0.26433 * 15 14 13 20 20 C 1.48426 * 126.03808 * 179.70139 * 19 15 14 21 21 C 1.39322 * 120.11179 * 324.71804 * 20 19 15 22 22 C 1.38028 * 119.87219 * 179.74605 * 21 20 19 23 23 C 1.38324 * 120.11925 * 0.55811 * 22 21 20 24 24 C 1.38319 * 120.23929 * 359.69383 * 23 22 21 25 25 C 1.38019 * 120.12144 * 0.02566 * 24 23 22 26 26 N 1.31621 * 107.92771 * 359.55460 * 19 15 14 27 27 C 1.53782 * 87.17366 * 25.38987 * 7 6 4 28 28 H 0.96994 * 120.00020 * 180.02562 * 1 2 3 29 29 H 0.96999 * 119.99556 * 0.02562 * 1 2 3 30 30 H 1.08994 * 113.61771 * 334.56632 * 6 4 2 31 31 H 1.09004 * 113.61050 * 203.66278 * 6 4 2 32 32 H 0.96996 * 119.99913 * 336.53190 * 9 7 6 33 33 H 1.08997 * 109.46809 * 59.99972 * 12 10 9 34 34 H 1.08996 * 109.46950 * 299.99942 * 12 10 9 35 35 H 1.08003 * 126.01189 * 359.93028 * 14 13 12 36 36 H 1.09004 * 109.46818 * 135.02957 * 16 15 14 37 37 H 0.96700 * 113.99995 * 180.02562 * 17 16 15 38 38 H 1.48501 * 109.99832 * 178.67878 * 18 16 15 39 39 H 1.48498 * 109.99998 * 300.00196 * 18 16 15 40 40 H 1.07994 * 120.07019 * 0.02562 * 21 20 19 41 41 H 1.07999 * 119.94140 * 180.27461 * 22 21 20 42 42 H 1.08000 * 119.87698 * 179.72433 * 23 22 21 43 43 H 1.08003 * 119.93497 * 180.02562 * 24 23 22 44 44 H 1.08002 * 120.05626 * 180.02562 * 25 24 23 45 45 H 1.09000 * 113.61209 * 89.15858 * 27 7 6 46 46 H 1.08999 * 113.61516 * 220.05895 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1012 -1.3052 0.0006 5 1 1.7399 -2.0028 -0.7550 6 6 3.6295 -1.1341 0.0011 7 6 3.5484 -1.1190 1.5367 8 1 3.4006 -0.1239 1.9564 9 7 4.6337 -1.8560 2.1889 10 6 4.9817 -1.5608 3.4571 11 8 4.3967 -0.6848 4.0582 12 6 6.0984 -2.3185 4.1279 13 7 6.2815 -1.8134 5.4907 14 6 6.2556 -2.5532 6.6202 15 6 6.4643 -1.7244 7.6664 16 6 6.5163 -2.1243 9.1185 17 8 5.3079 -1.7224 9.7667 18 14 6.7048 -3.9732 9.2472 19 6 6.6192 -0.4197 7.1593 20 6 6.8614 0.8057 7.9610 21 6 6.2717 0.9483 9.2153 22 6 6.5045 2.0876 9.9589 23 6 7.3122 3.0917 9.4560 24 6 7.8958 2.9575 8.2092 25 6 7.6744 1.8199 7.4596 26 7 6.5144 -0.4793 5.8486 27 6 2.2486 -1.9294 1.4001 28 1 -0.4850 -0.8400 0.0004 29 1 -0.4849 0.8401 -0.0004 30 1 3.9633 -0.1894 -0.4278 31 1 4.1653 -1.9948 -0.3993 32 1 5.1018 -2.5563 1.7080 33 1 7.0206 -2.1818 3.5631 34 1 5.8479 -3.3787 4.1635 35 1 6.0954 -3.6198 6.6771 36 1 7.3654 -1.6381 9.5990 37 1 5.2719 -1.9478 10.7063 38 1 6.7894 -4.3770 10.6737 39 1 5.5534 -4.6477 8.5957 40 1 5.6374 0.1670 9.6069 41 1 6.0516 2.1973 10.9331 42 1 7.4881 3.9834 10.0393 43 1 8.5259 3.7443 7.8215 44 1 8.1309 1.7160 6.4864 45 1 2.4063 -3.0078 1.3829 46 1 1.4693 -1.6257 2.0990 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_12622748.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:19:25 Heat of formation + Delta-G solvation = 30.249361 kcal Electronic energy + Delta-G solvation = -31019.341792 eV Core-core repulsion = 26685.058966 eV Total energy + Delta-G solvation = -4334.282826 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.152 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.49616 -41.75132 -40.47885 -39.77032 -38.41080 -37.85241 -34.95145 -34.78579 -34.37255 -32.39341 -31.88413 -31.47529 -29.05409 -26.94678 -26.77696 -25.80634 -24.22187 -23.50488 -22.86984 -21.92486 -21.47970 -20.85778 -20.33230 -18.59030 -18.52588 -18.35275 -18.11408 -18.06861 -17.54310 -17.02341 -16.65274 -16.40300 -16.09689 -15.91872 -15.78176 -15.59195 -15.39825 -15.13690 -14.83761 -14.53237 -14.39553 -14.33552 -14.14971 -13.73186 -13.65205 -13.59967 -13.37806 -13.18536 -13.07933 -12.78443 -12.38368 -12.17037 -11.90332 -11.86295 -11.71981 -11.47139 -11.28964 -11.05240 -10.76070 -10.65708 -10.30622 -10.15891 -9.88525 -9.76053 -9.30051 -4.83958 0.06168 0.46175 0.78154 1.31916 1.41302 1.43588 1.49688 1.68019 1.69307 2.01944 2.09478 2.50039 2.87866 3.31848 3.35312 3.39353 3.57975 3.59144 3.69521 3.75227 3.84868 3.92806 4.02431 4.10105 4.13242 4.15006 4.23457 4.29096 4.39911 4.50256 4.52101 4.61675 4.66373 4.76359 4.78381 4.81570 4.86281 4.96892 5.00312 5.06289 5.16140 5.30267 5.45349 5.56244 5.60270 5.63096 5.78773 5.90744 6.04817 6.38221 6.46387 6.58973 6.69657 7.16980 7.25992 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.838 5.838 2 C 0.519 3.481 3 O -0.597 6.597 4 C -0.131 4.131 5 H 0.151 0.849 6 C -0.117 4.117 7 C 0.111 3.889 8 H 0.063 0.937 9 N -0.697 5.697 10 C 0.491 3.509 11 O -0.573 6.573 12 C 0.111 3.889 13 N -0.360 5.360 14 C 0.075 3.925 15 C -0.227 4.227 16 C -0.055 4.055 17 O -0.555 6.555 18 Si 0.784 3.216 19 C 0.107 3.893 20 C -0.038 4.038 21 C -0.116 4.116 22 C -0.129 4.129 23 C -0.117 4.117 24 C -0.131 4.131 25 C -0.110 4.110 26 N -0.297 5.297 27 C -0.120 4.120 28 H 0.420 0.580 29 H 0.405 0.595 30 H 0.061 0.939 31 H 0.138 0.862 32 H 0.426 0.574 33 H 0.147 0.853 34 H 0.183 0.817 35 H 0.218 0.782 36 H 0.074 0.926 37 H 0.392 0.608 38 H -0.287 1.287 39 H -0.278 1.278 40 H 0.153 0.847 41 H 0.146 0.854 42 H 0.147 0.853 43 H 0.142 0.858 44 H 0.116 0.884 45 H 0.134 0.866 46 H 0.060 0.940 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.266 -12.506 -3.167 12.963 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.401 5.401 2 C 0.305 3.695 3 O -0.478 6.478 4 C -0.153 4.153 5 H 0.169 0.831 6 C -0.155 4.155 7 C 0.006 3.994 8 H 0.081 0.919 9 N -0.351 5.351 10 C 0.277 3.723 11 O -0.451 6.451 12 C -0.012 4.012 13 N -0.141 5.141 14 C -0.070 4.070 15 C -0.238 4.238 16 C -0.163 4.163 17 O -0.366 6.366 18 Si 0.686 3.314 19 C -0.058 4.058 20 C -0.040 4.040 21 C -0.135 4.135 22 C -0.147 4.147 23 C -0.135 4.135 24 C -0.149 4.149 25 C -0.130 4.130 26 N -0.119 5.119 27 C -0.159 4.159 28 H 0.251 0.749 29 H 0.235 0.765 30 H 0.080 0.920 31 H 0.156 0.844 32 H 0.265 0.735 33 H 0.165 0.835 34 H 0.200 0.800 35 H 0.234 0.766 36 H 0.093 0.907 37 H 0.242 0.758 38 H -0.214 1.214 39 H -0.205 1.205 40 H 0.170 0.830 41 H 0.163 0.837 42 H 0.165 0.835 43 H 0.160 0.840 44 H 0.134 0.866 45 H 0.152 0.848 46 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 0.909 -11.284 -4.331 12.121 hybrid contribution -1.242 0.674 1.299 1.920 sum -0.333 -10.610 -3.032 11.039 Atomic orbital electron populations 1.43764 1.06402 1.13816 1.76070 1.20807 0.83529 0.91201 0.73997 1.90764 1.69483 1.35701 1.51827 1.22278 0.96744 0.94555 1.01686 0.83139 1.23268 0.94362 1.04529 0.93329 1.22482 0.87824 0.95574 0.93561 0.91869 1.45692 1.36910 1.39563 1.12930 1.21304 0.84639 0.83593 0.82807 1.90838 1.55421 1.33466 1.65364 1.22041 0.99578 1.00968 0.78617 1.48111 1.54790 1.04556 1.06685 1.22783 0.99740 0.99741 0.84781 1.19629 1.16825 0.91850 0.95516 1.24419 0.88689 1.13829 0.89383 1.86526 1.39732 1.81725 1.28570 0.94042 0.85761 0.70838 0.80725 1.20921 0.99962 0.94168 0.90777 1.18066 0.99684 0.91909 0.94323 1.22033 0.98905 0.99419 0.93117 1.21436 0.98948 0.93457 1.00844 1.21610 0.96426 0.99638 0.95847 1.21361 1.00707 0.97591 0.95200 1.21319 0.98276 0.93737 0.99641 1.77685 1.23156 0.97310 1.13727 1.23440 0.96515 1.02242 0.93676 0.74886 0.76470 0.91993 0.84420 0.73496 0.83523 0.79961 0.76555 0.90749 0.75773 1.21392 1.20488 0.83021 0.83660 0.83519 0.84005 0.86554 0.84776 0.92154 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 2.81 8.87 -173.54 -1.54 1.27 16 2 C 0.52 2.00 7.35 87.66 0.64 2.64 16 3 O -0.60 -9.34 16.58 -3.02 -0.05 -9.39 16 4 C -0.13 0.62 4.35 -10.95 -0.05 0.57 16 5 H 0.15 -1.84 8.14 -2.39 -0.02 -1.86 16 6 C -0.12 0.38 7.20 31.12 0.22 0.61 16 7 C 0.11 0.17 3.86 45.52 0.18 0.35 16 8 H 0.06 0.87 7.43 -2.39 -0.02 0.85 16 9 N -0.70 2.55 5.36 -440.03 -2.36 0.19 16 10 C 0.49 2.01 7.86 87.66 0.69 2.70 16 11 O -0.57 -10.76 15.32 -3.04 -0.05 -10.81 16 12 C 0.11 -0.52 6.99 85.63 0.60 0.08 16 13 N -0.36 -2.09 3.40 -351.92 -1.20 -3.28 16 14 C 0.07 0.19 9.96 83.47 0.83 1.02 16 15 C -0.23 -1.72 5.37 -19.95 -0.11 -1.83 16 16 C -0.06 -0.13 2.00 71.24 0.14 0.01 16 17 O -0.56 -2.35 10.05 -148.98 -1.50 -3.84 16 18 Si 0.78 -2.78 30.78 68.60 2.11 -0.67 16 19 C 0.11 1.52 6.74 42.53 0.29 1.80 16 20 C -0.04 -0.53 5.80 -20.04 -0.12 -0.64 16 21 C -0.12 -1.25 8.95 22.48 0.20 -1.05 16 22 C -0.13 -0.88 10.03 22.24 0.22 -0.66 16 23 C -0.12 -0.69 10.04 22.31 0.22 -0.46 16 24 C -0.13 -1.04 10.03 22.24 0.22 -0.82 16 25 C -0.11 -1.36 9.75 22.48 0.22 -1.14 16 26 N -0.30 -4.62 11.63 -48.16 -0.56 -5.19 16 27 C -0.12 0.56 7.47 31.18 0.23 0.80 16 28 H 0.42 -4.47 8.83 -92.71 -0.82 -5.29 16 29 H 0.40 -1.25 8.93 -92.71 -0.83 -2.08 16 30 H 0.06 0.23 7.43 -2.39 -0.02 0.22 16 31 H 0.14 -1.61 8.11 -2.38 -0.02 -1.63 16 32 H 0.43 -5.82 8.71 -92.71 -0.81 -6.62 16 33 H 0.15 -1.48 8.14 -2.39 -0.02 -1.50 16 34 H 0.18 -2.94 8.07 -2.39 -0.02 -2.96 16 35 H 0.22 -1.52 6.36 -2.91 -0.02 -1.54 16 36 H 0.07 0.10 7.86 -2.39 -0.02 0.08 16 37 H 0.39 -1.76 8.74 -74.06 -0.65 -2.41 16 38 H -0.29 -0.27 7.11 99.48 0.71 0.44 16 39 H -0.28 -0.10 7.04 99.48 0.70 0.60 16 40 H 0.15 1.50 4.50 -2.91 -0.01 1.49 16 41 H 0.15 0.23 8.06 -2.91 -0.02 0.20 16 42 H 0.15 0.05 8.06 -2.91 -0.02 0.02 16 43 H 0.14 0.46 8.06 -2.91 -0.02 0.44 16 44 H 0.12 1.45 8.06 -2.91 -0.02 1.42 16 45 H 0.13 -1.53 8.14 -2.39 -0.02 -1.55 16 46 H 0.06 -0.04 8.09 -2.39 -0.02 -0.06 16 Total: 0.00 -46.99 389.64 -2.48 -49.47 By element: Atomic # 1 Polarization: -19.75 SS G_CDS: -1.99 Total: -21.74 kcal Atomic # 6 Polarization: -0.66 SS G_CDS: 4.65 Total: 3.98 kcal Atomic # 7 Polarization: -1.35 SS G_CDS: -5.66 Total: -7.01 kcal Atomic # 8 Polarization: -22.45 SS G_CDS: -1.59 Total: -24.04 kcal Atomic # 14 Polarization: -2.78 SS G_CDS: 2.11 Total: -0.67 kcal Total: -46.99 -2.48 -49.47 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_12622748.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.722 kcal (2) G-P(sol) polarization free energy of solvation -46.989 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.733 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.483 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -49.472 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.249 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds