Wall clock time and date at job start Thu Mar 4 2021 13:19:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34776 * 1 3 3 O 1.21285 * 120.00220 * 2 1 4 4 C 1.50699 * 119.99899 * 180.02562 * 2 1 3 5 5 H 1.09000 * 112.84783 * 311.19041 * 4 2 1 6 6 C 1.53782 * 113.69271 * 82.46310 * 4 2 1 7 7 C 1.53775 * 87.08043 * 139.99291 * 6 4 2 8 8 H 1.09003 * 113.69092 * 220.00498 * 7 6 4 9 9 N 1.46498 * 113.61870 * 89.11857 * 7 6 4 10 10 C 1.34779 * 120.00674 * 107.49977 * 9 7 6 11 11 O 1.21626 * 119.99301 * 0.02562 * 10 9 7 12 12 C 1.47290 * 120.00110 * 180.02562 * 10 9 7 13 13 C 1.39874 * 120.05035 * 359.97438 * 12 10 9 14 14 C 1.36422 * 120.19038 * 179.97438 * 13 12 10 15 15 C 1.39928 * 120.27770 * 0.02562 * 14 13 12 16 16 C 1.47564 * 119.95976 * 179.97438 * 15 14 13 17 17 C 1.36115 * 125.93954 * 359.97438 * 16 15 14 18 18 C 1.40797 * 106.72767 * 180.02562 * 17 16 15 19 19 C 1.34828 * 107.05339 * 0.02562 * 18 17 16 20 20 C 1.50705 * 125.65410 * 179.97438 * 19 18 17 21 21 O 1.42902 * 109.46956 * 64.99909 * 20 19 18 22 22 Si 1.86295 * 109.47371 * 184.99674 * 20 19 18 23 23 O 1.34228 * 108.69468 * 359.97438 * 19 18 17 24 24 C 1.39609 * 120.08678 * 0.26924 * 15 14 13 25 25 C 1.38276 * 119.81231 * 359.45126 * 24 15 14 26 26 O 1.35679 * 120.13757 * 180.24745 * 25 24 15 27 27 C 1.53776 * 87.08501 * 334.56611 * 7 6 4 28 28 H 0.96999 * 119.99835 * 179.97438 * 1 2 3 29 29 H 0.96997 * 119.99891 * 359.97438 * 1 2 3 30 30 H 1.09000 * 113.61604 * 25.44119 * 6 4 2 31 31 H 1.09005 * 113.61227 * 254.53974 * 6 4 2 32 32 H 0.97000 * 119.99858 * 287.49797 * 9 7 6 33 33 H 1.08001 * 119.90712 * 0.02562 * 13 12 10 34 34 H 1.07994 * 119.86572 * 179.97438 * 14 13 12 35 35 H 1.07994 * 126.63208 * 359.77392 * 17 16 15 36 36 H 1.08003 * 126.47242 * 179.97438 * 18 17 16 37 37 H 1.08999 * 109.47098 * 305.00196 * 20 19 18 38 38 H 0.96694 * 113.99653 * 180.02562 * 21 20 19 39 39 H 1.48499 * 110.00113 * 300.00267 * 22 20 19 40 40 H 1.48508 * 109.99615 * 61.31863 * 22 20 19 41 41 H 1.07998 * 120.09461 * 179.72969 * 24 15 14 42 42 H 0.96700 * 113.99798 * 270.30424 * 26 25 24 43 43 H 1.09003 * 113.61858 * 139.98232 * 27 7 6 44 44 H 1.09003 * 113.61390 * 270.88634 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3051 -0.0006 5 1 1.7400 -2.0027 0.7550 6 6 2.2502 -1.9320 -1.3969 7 6 3.6826 -2.3127 -0.9869 8 1 4.4153 -2.1829 -1.7834 9 7 3.7781 -3.6206 -0.3338 10 6 4.3240 -4.6635 -0.9903 11 8 4.7377 -4.5185 -2.1248 12 6 4.4195 -5.9785 -0.3339 13 6 3.9445 -6.1462 0.9710 14 6 4.0310 -7.3630 1.5816 15 6 4.5956 -8.4518 0.9080 16 6 4.6862 -9.7648 1.5753 17 6 4.2614 -10.0510 2.8364 18 6 4.5428 -11.4124 3.0596 19 6 5.1198 -11.8862 1.9369 20 6 5.5914 -13.3012 1.7214 21 8 4.4689 -14.1854 1.7399 22 14 6.4522 -13.4249 0.0739 23 8 5.2045 -10.8886 1.0428 24 6 5.0790 -8.2960 -0.3925 25 6 4.9878 -7.0657 -1.0170 26 8 5.4509 -6.9082 -2.2825 27 6 3.6295 -1.1341 -0.0006 28 1 -0.4850 -0.8400 -0.0004 29 1 -0.4850 0.8400 0.0004 30 1 2.2068 -1.2057 -2.2085 31 1 1.6001 -2.7914 -1.5613 32 1 3.4485 -3.7361 0.5711 33 1 3.5072 -5.3100 1.4965 34 1 3.6630 -7.4864 2.5894 35 1 3.8017 -9.3653 3.5326 36 1 4.3363 -11.9714 3.9604 37 1 6.2849 -13.5779 2.5155 38 1 4.6986 -15.1153 1.6074 39 1 5.5171 -13.0501 -1.0171 40 1 7.6399 -12.5337 0.0533 41 1 5.5187 -9.1352 -0.9109 42 1 6.3806 -6.6467 -2.3315 43 1 4.0930 -1.3493 0.9623 44 1 3.9633 -0.1897 -0.4304 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_12807986.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:19:32 Heat of formation + Delta-G solvation = -75.099849 kcal Electronic energy + Delta-G solvation = -30589.441725 eV Core-core repulsion = 26055.153291 eV Total energy + Delta-G solvation = -4534.288434 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.129 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -43.87318 -41.94862 -41.15598 -39.82770 -38.45160 -38.05252 -37.82463 -34.81498 -34.57237 -34.27504 -33.19391 -31.43019 -30.61037 -27.74665 -26.78261 -26.75408 -24.55637 -24.14153 -22.79288 -22.23584 -22.05285 -21.43360 -20.36775 -19.70992 -19.01378 -18.69201 -18.33228 -18.09461 -17.75158 -17.35312 -17.18793 -16.67245 -16.53196 -16.30131 -16.07611 -15.90254 -15.87835 -15.54782 -15.30219 -14.96624 -14.58386 -14.44258 -14.31069 -14.20383 -14.00090 -13.76627 -13.63226 -13.55376 -13.34364 -12.94863 -12.80555 -12.73479 -12.26978 -12.01932 -11.76309 -11.62589 -11.24446 -11.03607 -10.93517 -10.79427 -10.67029 -10.45940 -10.18223 -10.05471 -9.11389 -5.14871 -0.89642 0.04263 0.52273 1.11967 1.30499 1.49993 1.57551 1.58775 1.83062 1.91233 1.96097 2.54680 2.62379 2.91413 3.19651 3.34456 3.42091 3.49184 3.55270 3.69694 3.71606 3.74460 3.89343 3.89753 3.91748 4.11650 4.25666 4.26701 4.34989 4.51825 4.55613 4.59678 4.68040 4.69997 4.74609 4.81506 4.84872 4.91366 4.96986 5.00515 5.05130 5.12219 5.35077 5.44068 5.48776 5.85988 5.87376 6.41335 6.46010 6.59278 6.80985 7.10972 7.33401 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.839 5.839 2 C 0.520 3.480 3 O -0.595 6.595 4 C -0.127 4.127 5 H 0.150 0.850 6 C -0.128 4.128 7 C 0.119 3.881 8 H 0.087 0.913 9 N -0.691 5.691 10 C 0.561 3.439 11 O -0.561 6.561 12 C -0.175 4.175 13 C -0.045 4.045 14 C -0.107 4.107 15 C 0.023 3.977 16 C -0.006 4.006 17 C -0.166 4.166 18 C -0.175 4.175 19 C -0.031 4.031 20 C -0.035 4.035 21 O -0.559 6.559 22 Si 0.799 3.201 23 O -0.198 6.198 24 C -0.162 4.162 25 C 0.162 3.838 26 O -0.496 6.496 27 C -0.119 4.119 28 H 0.418 0.582 29 H 0.404 0.596 30 H 0.086 0.914 31 H 0.091 0.909 32 H 0.417 0.583 33 H 0.182 0.818 34 H 0.175 0.825 35 H 0.192 0.808 36 H 0.177 0.823 37 H 0.130 0.870 38 H 0.414 0.586 39 H -0.312 1.312 40 H -0.295 1.295 41 H 0.122 0.878 42 H 0.409 0.591 43 H 0.097 0.903 44 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.419 -6.201 8.779 11.017 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.402 5.402 2 C 0.306 3.694 3 O -0.476 6.476 4 C -0.148 4.148 5 H 0.168 0.832 6 C -0.168 4.168 7 C 0.013 3.987 8 H 0.105 0.895 9 N -0.344 5.344 10 C 0.349 3.651 11 O -0.440 6.440 12 C -0.179 4.179 13 C -0.063 4.063 14 C -0.124 4.124 15 C 0.023 3.977 16 C -0.054 4.054 17 C -0.184 4.184 18 C -0.194 4.194 19 C -0.080 4.080 20 C -0.145 4.145 21 O -0.371 6.371 22 Si 0.706 3.294 23 O -0.097 6.097 24 C -0.181 4.181 25 C 0.115 3.885 26 O -0.309 6.309 27 C -0.158 4.158 28 H 0.249 0.751 29 H 0.235 0.765 30 H 0.105 0.895 31 H 0.109 0.891 32 H 0.257 0.743 33 H 0.199 0.801 34 H 0.193 0.807 35 H 0.209 0.791 36 H 0.194 0.806 37 H 0.147 0.853 38 H 0.267 0.733 39 H -0.241 1.241 40 H -0.223 1.223 41 H 0.140 0.860 42 H 0.269 0.731 43 H 0.115 0.885 44 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -2.085 -4.755 6.912 8.645 hybrid contribution -0.213 0.413 0.268 0.537 sum -2.299 -4.342 7.180 8.700 Atomic orbital electron populations 1.43833 1.06547 1.13727 1.76044 1.20904 0.83353 0.91222 0.73932 1.90752 1.69439 1.35472 1.51947 1.22904 0.96287 0.94680 1.00953 0.83199 1.23297 0.97101 1.00985 0.95372 1.21749 0.98038 0.82262 0.96619 0.89525 1.45363 1.61879 1.08231 1.18903 1.18157 0.77343 0.84307 0.85285 1.90839 1.49077 1.84623 1.19479 1.20488 1.07698 0.93034 0.96694 1.21245 0.95029 0.98699 0.91329 1.21097 0.99075 0.90245 1.01992 1.18023 0.97805 0.89370 0.92544 1.20774 1.04107 0.86004 0.94563 1.22332 1.03586 0.97021 0.95480 1.21915 1.02192 0.95219 1.00053 1.22216 1.06141 0.90351 0.89338 1.23900 0.93447 0.82999 1.14114 1.86411 1.31801 1.22590 1.96328 0.94460 0.75277 0.86898 0.72787 1.83954 1.65134 1.18384 1.42230 1.21494 1.03761 0.97701 0.95131 1.18465 0.95013 0.91197 0.83801 1.84728 1.33262 1.90832 1.22094 1.23167 0.94038 0.97750 1.00797 0.75078 0.76518 0.89517 0.89057 0.74349 0.80117 0.80745 0.79096 0.80559 0.85265 0.73301 1.24102 1.22291 0.86007 0.73138 0.88463 0.89164 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.36 8.87 -173.53 -1.54 3.82 16 2 C 0.52 0.25 7.63 87.66 0.67 0.91 16 3 O -0.60 -6.75 16.74 -3.04 -0.05 -6.80 16 4 C -0.13 0.75 4.02 -11.01 -0.04 0.71 16 5 H 0.15 -1.98 8.14 -2.39 -0.02 -2.00 16 6 C -0.13 0.46 7.43 31.12 0.23 0.69 16 7 C 0.12 -0.16 4.32 45.51 0.20 0.04 16 8 H 0.09 0.38 7.46 -2.39 -0.02 0.36 16 9 N -0.69 2.54 5.21 -443.44 -2.31 0.23 16 10 C 0.56 2.50 7.75 86.62 0.67 3.17 16 11 O -0.56 -7.74 14.74 16.88 0.25 -7.49 16 12 C -0.18 -0.37 5.89 -19.97 -0.12 -0.49 16 13 C -0.04 0.27 9.47 22.24 0.21 0.48 16 14 C -0.11 0.50 9.49 22.26 0.21 0.71 16 15 C 0.02 0.07 5.87 -20.08 -0.12 -0.05 16 16 C -0.01 -0.03 7.02 24.24 0.17 0.14 16 17 C -0.17 -0.09 10.26 22.40 0.23 0.14 16 18 C -0.17 -0.37 10.78 22.11 0.24 -0.13 16 19 C -0.03 -0.17 6.24 24.90 0.16 -0.01 16 20 C -0.03 0.06 2.97 71.24 0.21 0.27 16 21 O -0.56 1.21 12.86 -148.98 -1.92 -0.70 16 22 Si 0.80 -0.39 32.11 68.60 2.20 1.82 16 23 O -0.20 -1.92 8.79 -5.92 -0.05 -1.97 16 24 C -0.16 -1.10 9.65 22.61 0.22 -0.88 16 25 C 0.16 1.12 6.71 22.81 0.15 1.27 16 26 O -0.50 -4.76 11.56 -68.98 -0.80 -5.55 16 27 C -0.12 0.35 7.15 31.12 0.22 0.57 16 28 H 0.42 -5.39 8.83 -92.71 -0.82 -6.21 16 29 H 0.40 -2.55 8.93 -92.71 -0.83 -3.38 16 30 H 0.09 -0.08 8.10 -2.39 -0.02 -0.10 16 31 H 0.09 -0.46 8.14 -2.38 -0.02 -0.48 16 32 H 0.42 -4.81 6.71 -92.71 -0.62 -5.43 16 33 H 0.18 -2.80 6.38 -2.91 -0.02 -2.82 16 34 H 0.18 -2.06 6.95 -2.91 -0.02 -2.08 16 35 H 0.19 -1.41 7.24 -2.91 -0.02 -1.43 16 36 H 0.18 -0.46 8.06 -2.91 -0.02 -0.48 16 37 H 0.13 -1.07 7.96 -2.39 -0.02 -1.09 16 38 H 0.41 -5.66 8.74 -74.06 -0.65 -6.31 16 39 H -0.31 -3.13 7.11 99.48 0.71 -2.43 16 40 H -0.30 -1.87 7.11 99.48 0.71 -1.16 16 41 H 0.12 1.10 7.90 -2.91 -0.02 1.08 16 42 H 0.41 0.99 9.06 -74.06 -0.67 0.32 16 43 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16 44 H 0.09 0.20 7.43 -2.39 -0.02 0.19 16 Total: 0.00 -40.08 381.92 -3.12 -43.19 By element: Atomic # 1 Polarization: -31.66 SS G_CDS: -2.41 Total: -34.07 kcal Atomic # 6 Polarization: 4.03 SS G_CDS: 3.51 Total: 7.54 kcal Atomic # 7 Polarization: 7.90 SS G_CDS: -3.85 Total: 4.05 kcal Atomic # 8 Polarization: -19.96 SS G_CDS: -2.57 Total: -22.52 kcal Atomic # 14 Polarization: -0.39 SS G_CDS: 2.20 Total: 1.82 kcal Total: -40.08 -3.12 -43.19 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_12807986.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.905 kcal (2) G-P(sol) polarization free energy of solvation -40.079 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.984 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.116 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.195 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.100 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds