Wall clock time and date at job start Thu Mar 4 2021 13:19:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34779 * 1 3 3 O 1.21280 * 119.99565 * 2 1 4 4 C 1.50698 * 120.00032 * 180.02562 * 2 1 3 5 5 H 1.09003 * 112.85132 * 48.80105 * 4 2 1 6 6 C 1.53785 * 113.61425 * 180.02562 * 4 2 1 7 7 C 1.53781 * 87.08021 * 89.19917 * 6 4 2 8 8 H 1.09002 * 113.61190 * 270.79838 * 7 6 4 9 9 N 1.46496 * 113.61479 * 139.98553 * 7 6 4 10 10 C 1.34777 * 120.00258 * 155.00061 * 9 7 6 11 11 O 1.21565 * 120.00159 * 359.97438 * 10 9 7 12 12 C 1.47726 * 119.99742 * 179.97438 * 10 9 7 13 13 C 1.39700 * 120.02664 * 359.72383 * 12 10 9 14 14 C 1.37667 * 119.97617 * 179.75701 * 13 12 10 15 15 C 1.39503 * 120.02333 * 0.49730 * 14 13 12 16 16 C 1.48276 * 119.97728 * 179.73748 * 15 14 13 17 17 C 1.39403 * 120.12763 * 179.74043 * 16 15 14 18 18 C 1.38003 * 119.87114 * 179.78963 * 17 16 15 19 19 C 1.38332 * 120.12775 * 0.49395 * 18 17 16 20 20 C 1.50697 * 119.87194 * 179.72297 * 19 18 17 21 21 O 1.42901 * 109.46867 * 245.01543 * 20 19 18 22 22 Si 1.86299 * 109.47323 * 5.01549 * 20 19 18 23 23 C 1.38341 * 120.25401 * 359.73755 * 19 18 17 24 24 C 1.37998 * 120.12686 * 0.02677 * 23 19 18 25 25 C 1.39511 * 120.04843 * 359.75455 * 15 14 13 26 26 C 1.37666 * 120.02187 * 0.02562 * 25 15 14 27 27 C 1.53779 * 87.08570 * 25.43174 * 7 6 4 28 28 H 0.97007 * 119.99882 * 179.97438 * 1 2 3 29 29 H 0.97000 * 120.00201 * 359.97438 * 1 2 3 30 30 H 1.08997 * 113.61163 * 334.65039 * 6 4 2 31 31 H 1.08998 * 113.69109 * 203.75897 * 6 4 2 32 32 H 0.96999 * 119.99694 * 334.99451 * 9 7 6 33 33 H 1.08002 * 120.01664 * 359.97438 * 13 12 10 34 34 H 1.08001 * 119.98800 * 180.21158 * 14 13 12 35 35 H 1.08002 * 120.06360 * 0.02860 * 17 16 15 36 36 H 1.07996 * 119.93338 * 180.23182 * 18 17 16 37 37 H 1.09002 * 109.47259 * 125.02327 * 20 19 18 38 38 H 0.96700 * 113.99790 * 59.99909 * 21 20 19 39 39 H 1.48503 * 109.99722 * 58.68228 * 22 20 19 40 40 H 1.48493 * 110.00033 * 180.02562 * 22 20 19 41 41 H 1.07999 * 119.93262 * 180.02562 * 23 19 18 42 42 H 1.08002 * 120.06367 * 179.97438 * 24 23 19 43 43 H 1.08001 * 119.98708 * 179.97438 * 25 15 14 44 44 H 1.07997 * 120.01115 * 179.97438 * 26 25 15 45 45 H 1.09000 * 113.60898 * 89.11248 * 27 7 6 46 46 H 1.08994 * 113.62073 * 220.01889 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1013 -1.3051 -0.0006 5 1 1.7400 -2.0021 -0.7567 6 6 3.6296 -1.1340 0.0001 7 6 3.5488 -1.1224 1.5358 8 1 3.4009 -0.1283 1.9577 9 7 4.6341 -1.8608 2.1861 10 6 5.0028 -1.5478 3.4441 11 8 4.4351 -0.6525 4.0390 12 6 6.0969 -2.2928 4.1001 13 6 6.7459 -3.3255 3.4190 14 6 7.7687 -4.0158 4.0294 15 6 8.1503 -3.6911 5.3314 16 6 9.2482 -4.4391 5.9900 17 6 9.6356 -4.1137 7.2889 18 6 10.6552 -4.8162 7.8984 19 6 11.2992 -5.8348 7.2192 20 6 12.4160 -6.5940 7.8880 21 8 13.6409 -6.3490 7.1940 22 14 12.5799 -6.0285 9.6555 23 6 10.9222 -6.1589 5.9282 24 6 9.9008 -5.4665 5.3105 25 6 7.4994 -2.6634 6.0144 26 6 6.4793 -1.9689 5.4042 27 6 2.2498 -1.9334 1.3952 28 1 -0.4850 -0.8401 -0.0004 29 1 -0.4850 0.8400 0.0004 30 1 3.9632 -0.1882 -0.4267 31 1 4.1666 -1.9929 -0.4024 32 1 5.0873 -2.5749 1.7114 33 1 6.4477 -3.5801 2.4127 34 1 8.2728 -4.8120 3.5018 35 1 9.1363 -3.3160 7.8187 36 1 10.9536 -4.5675 8.9061 37 1 12.1937 -7.6609 7.8669 38 1 13.9015 -5.4180 7.1727 39 1 11.3023 -6.2486 10.3797 40 1 13.6785 -6.7693 10.3260 41 1 11.4283 -6.9553 5.4029 42 1 9.6076 -5.7201 4.3024 43 1 7.7953 -2.4132 7.0225 44 1 5.9753 -1.1737 5.9332 45 1 2.4084 -3.0116 1.3740 46 1 1.4696 -1.6330 2.0945 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_13158362.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:19:39 Heat of formation + Delta-G solvation = -28.744610 kcal Electronic energy + Delta-G solvation = -28897.500653 eV Core-core repulsion = 24718.822957 eV Total energy + Delta-G solvation = -4178.677696 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.146 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -41.86752 -41.18076 -40.54219 -39.29570 -38.30749 -37.49335 -34.92957 -34.58065 -33.80515 -32.54855 -31.57156 -30.82454 -27.58548 -26.75191 -26.52905 -24.65155 -24.44479 -22.95023 -22.55548 -22.20383 -21.32481 -20.40216 -19.19912 -18.44203 -18.19849 -18.04334 -17.71863 -17.24614 -16.85684 -16.36270 -16.29613 -16.18174 -15.93602 -15.68604 -15.49661 -15.38809 -15.06346 -14.96163 -14.86633 -14.41307 -14.32190 -14.16127 -14.03823 -13.59973 -13.58045 -13.33593 -13.14572 -13.04332 -12.73113 -12.53467 -12.11197 -11.94301 -11.86116 -11.68615 -11.59273 -11.11521 -10.98820 -10.76708 -10.69701 -10.41258 -10.14738 -10.05813 -9.94896 -9.07032 -5.00926 -0.68948 0.35535 0.41242 0.50283 1.30751 1.53956 1.62439 1.76854 1.95715 2.06784 2.54317 2.60756 3.01488 3.36864 3.40637 3.43703 3.54705 3.63825 3.67485 3.74051 3.80998 3.87480 3.89667 4.02250 4.06189 4.26990 4.27479 4.29501 4.37888 4.48150 4.53308 4.65384 4.67862 4.68584 4.79606 4.85303 4.90488 4.92246 4.99242 5.07105 5.09409 5.14767 5.21278 5.27487 5.42167 5.46992 5.50824 5.66020 5.80221 5.84600 5.93969 6.43330 6.45575 6.75885 7.12445 7.31162 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.521 3.479 3 O -0.595 6.595 4 C -0.130 4.130 5 H 0.149 0.851 6 C -0.119 4.119 7 C 0.108 3.892 8 H 0.075 0.925 9 N -0.697 5.697 10 C 0.554 3.446 11 O -0.586 6.586 12 C -0.152 4.152 13 C -0.072 4.072 14 C -0.120 4.120 15 C -0.022 4.022 16 C -0.060 4.060 17 C -0.107 4.107 18 C -0.119 4.119 19 C -0.120 4.120 20 C -0.073 4.073 21 O -0.555 6.555 22 Si 0.770 3.230 23 C -0.102 4.102 24 C -0.107 4.107 25 C -0.122 4.122 26 C -0.072 4.072 27 C -0.121 4.121 28 H 0.419 0.581 29 H 0.405 0.595 30 H 0.065 0.935 31 H 0.132 0.868 32 H 0.418 0.582 33 H 0.161 0.839 34 H 0.158 0.842 35 H 0.146 0.854 36 H 0.146 0.854 37 H 0.107 0.893 38 H 0.395 0.605 39 H -0.287 1.287 40 H -0.301 1.301 41 H 0.132 0.868 42 H 0.147 0.853 43 H 0.148 0.852 44 H 0.125 0.875 45 H 0.128 0.872 46 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.995 -6.035 -3.635 7.116 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.307 3.693 3 O -0.475 6.475 4 C -0.151 4.151 5 H 0.167 0.833 6 C -0.158 4.158 7 C 0.003 3.997 8 H 0.093 0.907 9 N -0.349 5.349 10 C 0.343 3.657 11 O -0.468 6.468 12 C -0.155 4.155 13 C -0.090 4.090 14 C -0.137 4.137 15 C -0.022 4.022 16 C -0.060 4.060 17 C -0.125 4.125 18 C -0.136 4.136 19 C -0.120 4.120 20 C -0.183 4.183 21 O -0.363 6.363 22 Si 0.677 3.323 23 C -0.121 4.121 24 C -0.125 4.125 25 C -0.140 4.140 26 C -0.091 4.091 27 C -0.160 4.160 28 H 0.251 0.749 29 H 0.236 0.764 30 H 0.084 0.916 31 H 0.150 0.850 32 H 0.258 0.742 33 H 0.179 0.821 34 H 0.175 0.825 35 H 0.164 0.836 36 H 0.163 0.837 37 H 0.124 0.876 38 H 0.245 0.755 39 H -0.214 1.214 40 H -0.229 1.229 41 H 0.150 0.850 42 H 0.165 0.835 43 H 0.166 0.834 44 H 0.143 0.857 45 H 0.147 0.853 46 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -0.934 -5.715 -2.494 6.305 hybrid contribution -0.694 -0.288 -0.316 0.815 sum -1.628 -6.003 -2.810 6.825 Atomic orbital electron populations 1.43755 1.06341 1.13842 1.76041 1.20711 0.83528 0.91033 0.74058 1.90762 1.69462 1.35534 1.51772 1.22222 0.96586 0.94727 1.01593 0.83304 1.23279 0.94529 1.04528 0.93420 1.22619 0.87537 0.95960 0.93612 0.90669 1.45740 1.36994 1.38115 1.14058 1.18700 0.82606 0.82343 0.82079 1.90777 1.57133 1.33365 1.65499 1.19984 0.99095 1.00123 0.96337 1.21482 0.94252 0.92808 1.00481 1.21486 0.97371 1.00764 0.94101 1.19155 0.94248 0.94573 0.94264 1.18937 0.95879 0.96609 0.94597 1.21492 0.96899 0.99923 0.94195 1.21131 0.96678 0.95637 1.00145 1.20532 0.98211 0.97479 0.95781 1.25143 0.83758 1.02173 1.07225 1.86474 1.37893 1.33394 1.78548 0.93767 0.77230 0.89151 0.72150 1.21110 0.96575 0.99862 0.94503 1.21520 0.95378 0.94759 1.00801 1.21380 0.95780 0.95621 1.01218 1.21254 0.95733 0.98414 0.93721 1.23413 0.96628 1.01998 0.93994 0.74899 0.76391 0.91608 0.84971 0.74230 0.82127 0.82477 0.83631 0.83696 0.87554 0.75481 1.21417 1.22934 0.85046 0.83514 0.83425 0.85745 0.85340 0.91466 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 3.91 8.87 -173.53 -1.54 2.37 16 2 C 0.52 1.36 7.36 87.66 0.65 2.01 16 3 O -0.59 -8.29 16.59 -3.03 -0.05 -8.34 16 4 C -0.13 0.65 4.34 -11.01 -0.05 0.60 16 5 H 0.15 -1.82 8.14 -2.39 -0.02 -1.84 16 6 C -0.12 0.36 7.21 31.12 0.22 0.59 16 7 C 0.11 0.20 3.89 45.52 0.18 0.38 16 8 H 0.08 0.90 7.40 -2.39 -0.02 0.88 16 9 N -0.70 0.32 5.30 -443.03 -2.35 -2.03 16 10 C 0.55 4.01 7.77 86.75 0.67 4.69 16 11 O -0.59 -10.14 15.93 -3.92 -0.06 -10.20 16 12 C -0.15 -0.46 5.88 -20.06 -0.12 -0.58 16 13 C -0.07 0.27 9.52 22.49 0.21 0.49 16 14 C -0.12 0.46 9.41 22.44 0.21 0.67 16 15 C -0.02 0.02 5.88 -19.99 -0.12 -0.10 16 16 C -0.06 0.06 5.88 -20.05 -0.12 -0.06 16 17 C -0.11 0.23 9.43 22.49 0.21 0.44 16 18 C -0.12 0.32 8.65 22.24 0.19 0.51 16 19 C -0.12 0.15 5.36 -19.82 -0.11 0.05 16 20 C -0.07 0.10 2.80 71.23 0.20 0.30 16 21 O -0.56 0.32 12.83 -148.98 -1.91 -1.59 16 22 Si 0.77 -1.96 29.79 68.60 2.04 0.08 16 23 C -0.10 0.11 9.67 22.24 0.21 0.32 16 24 C -0.11 0.24 9.43 22.49 0.21 0.46 16 25 C -0.12 -0.06 9.41 22.44 0.21 0.15 16 26 C -0.07 -0.31 9.58 22.49 0.22 -0.09 16 27 C -0.12 0.55 7.46 31.12 0.23 0.79 16 28 H 0.42 -4.93 8.83 -92.70 -0.82 -5.75 16 29 H 0.41 -1.86 8.93 -92.71 -0.83 -2.69 16 30 H 0.07 0.21 7.43 -2.39 -0.02 0.19 16 31 H 0.13 -1.39 8.12 -2.39 -0.02 -1.41 16 32 H 0.42 -3.58 6.74 -92.71 -0.63 -4.20 16 33 H 0.16 -1.82 6.39 -2.91 -0.02 -1.84 16 34 H 0.16 -1.42 6.19 -2.91 -0.02 -1.44 16 35 H 0.15 -0.84 6.19 -2.91 -0.02 -0.85 16 36 H 0.15 -0.98 4.89 -2.91 -0.01 -0.99 16 37 H 0.11 -0.02 7.96 -2.39 -0.02 -0.04 16 38 H 0.40 -3.34 8.70 -74.06 -0.64 -3.98 16 39 H -0.29 -0.69 7.11 99.48 0.71 0.02 16 40 H -0.30 -1.60 7.11 99.48 0.71 -0.89 16 41 H 0.13 -0.28 8.06 -2.91 -0.02 -0.30 16 42 H 0.15 -1.00 6.19 -2.91 -0.02 -1.02 16 43 H 0.15 -0.51 6.19 -2.91 -0.02 -0.52 16 44 H 0.12 0.80 7.64 -2.91 -0.02 0.78 16 45 H 0.13 -1.30 8.14 -2.39 -0.02 -1.32 16 46 H 0.07 -0.12 8.10 -2.39 -0.02 -0.14 16 Total: 0.00 -33.14 382.67 -2.33 -35.47 By element: Atomic # 1 Polarization: -25.58 SS G_CDS: -1.78 Total: -27.36 kcal Atomic # 6 Polarization: 8.28 SS G_CDS: 3.33 Total: 11.61 kcal Atomic # 7 Polarization: 4.23 SS G_CDS: -3.89 Total: 0.34 kcal Atomic # 8 Polarization: -18.11 SS G_CDS: -2.02 Total: -20.13 kcal Atomic # 14 Polarization: -1.96 SS G_CDS: 2.04 Total: 0.08 kcal Total: -33.14 -2.33 -35.47 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13158362.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.724 kcal (2) G-P(sol) polarization free energy of solvation -33.142 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.418 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.327 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.469 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.745 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds