Wall clock time and date at job start Thu Mar 4 2021 13:19:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34781 * 1 3 3 O 1.21279 * 119.99889 * 2 1 4 4 C 1.50698 * 119.99793 * 180.02562 * 2 1 3 5 5 H 1.09003 * 112.85095 * 311.19539 * 4 2 1 6 6 C 1.53777 * 113.61787 * 82.50414 * 4 2 1 7 7 C 1.53777 * 87.08446 * 139.97681 * 6 4 2 8 8 H 1.09000 * 113.69063 * 220.00613 * 7 6 4 9 9 N 1.46505 * 113.61441 * 89.11804 * 7 6 4 10 10 C 1.34767 * 120.00032 * 107.50088 * 9 7 6 11 11 O 1.21279 * 120.00236 * 0.02562 * 10 9 7 12 12 C 1.50706 * 119.99811 * 180.02562 * 10 9 7 13 13 C 1.50700 * 109.46903 * 185.69000 * 12 10 9 14 14 C 1.39323 * 120.06228 * 83.00480 * 13 12 10 15 15 C 1.48388 * 120.11936 * 359.97438 * 14 13 12 16 16 C 1.39335 * 120.11974 * 235.75987 * 15 14 13 17 17 C 1.38022 * 119.87543 * 179.78827 * 16 15 14 18 18 C 1.38323 * 120.12272 * 0.48936 * 17 16 15 19 19 C 1.50696 * 119.87806 * 179.76587 * 18 17 16 20 20 O 1.42902 * 109.47055 * 244.97668 * 19 18 17 21 21 Si 1.86305 * 109.47269 * 4.97331 * 19 18 17 22 22 C 1.38322 * 120.24208 * 359.74181 * 18 17 16 23 23 C 1.38020 * 120.12138 * 0.02562 * 22 18 17 24 24 C 1.39355 * 119.75949 * 179.71739 * 14 13 12 25 25 C 1.37998 * 119.87854 * 0.28069 * 24 14 13 26 26 C 1.38342 * 120.11870 * 0.02562 * 25 24 14 27 27 C 1.38038 * 120.06462 * 263.30033 * 13 12 10 28 28 C 1.53779 * 87.08304 * 334.56833 * 7 6 4 29 29 H 0.97003 * 119.99522 * 179.97438 * 1 2 3 30 30 H 0.96994 * 120.00075 * 359.97438 * 1 2 3 31 31 H 1.09007 * 113.61353 * 25.42606 * 6 4 2 32 32 H 1.09000 * 113.61764 * 254.53116 * 6 4 2 33 33 H 0.96999 * 119.99440 * 287.50316 * 9 7 6 34 34 H 1.08993 * 109.47304 * 65.68988 * 12 10 9 35 35 H 1.09002 * 109.46920 * 305.68823 * 12 10 9 36 36 H 1.07997 * 120.06320 * 0.02562 * 16 15 14 37 37 H 1.08003 * 119.93503 * 180.23106 * 17 16 15 38 38 H 1.09001 * 109.47456 * 124.98082 * 19 18 17 39 39 H 0.96699 * 114.00290 * 179.97438 * 20 19 18 40 40 H 1.48498 * 110.00034 * 300.00398 * 21 19 18 41 41 H 1.48501 * 109.99670 * 61.32310 * 21 19 18 42 42 H 1.07998 * 119.93479 * 180.02562 * 22 18 17 43 43 H 1.08000 * 120.05861 * 180.02562 * 23 22 18 44 44 H 1.08004 * 120.06170 * 180.29783 * 24 14 13 45 45 H 1.08001 * 119.94303 * 179.97438 * 25 24 14 46 46 H 1.08005 * 119.87955 * 179.97438 * 26 25 24 47 47 H 1.08007 * 119.93960 * 359.97438 * 27 13 12 48 48 H 1.08996 * 113.61724 * 139.97879 * 28 7 6 49 49 H 1.08997 * 113.61199 * 270.80135 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 -0.0006 5 1 1.7399 -2.0028 0.7549 6 6 2.2501 -1.9299 -1.3978 7 6 3.6825 -2.3112 -0.9886 8 1 4.4151 -2.1802 -1.7850 9 7 3.7782 -3.6201 -0.3375 10 6 4.3239 -4.6619 -0.9957 11 8 4.7363 -4.5158 -2.1268 12 6 4.4217 -6.0085 -0.3261 13 6 5.1893 -6.9555 -1.2121 14 6 6.5824 -6.9518 -1.1963 15 6 7.3145 -6.0155 -0.3078 16 6 8.2557 -5.1373 -0.8411 17 6 8.9306 -4.2656 -0.0106 18 6 8.6813 -4.2697 1.3500 19 6 9.4252 -3.3191 2.2523 20 8 10.2563 -4.0627 3.1459 21 14 10.4823 -2.1832 1.2213 22 6 7.7515 -5.1427 1.8853 23 6 7.0674 -6.0154 1.0635 24 6 7.2858 -7.8343 -2.0139 25 6 6.5999 -8.7025 -2.8386 26 6 5.2166 -8.6975 -2.8550 27 6 4.5135 -7.8240 -2.0455 28 6 3.6296 -1.1341 -0.0005 29 1 -0.4849 -0.8401 -0.0004 30 1 -0.4850 0.8400 0.0004 31 1 2.2065 -1.2024 -2.2084 32 1 1.6000 -2.7890 -1.5635 33 1 3.4486 -3.7369 0.5673 34 1 3.4201 -6.4026 -0.1545 35 1 4.9390 -5.9033 0.6276 36 1 8.4541 -5.1361 -1.9027 37 1 9.6577 -3.5819 -0.4234 38 1 8.7109 -2.7292 2.8266 39 1 10.7662 -3.5138 3.7573 40 1 11.4605 -2.9754 0.4336 41 1 9.6269 -1.3812 0.3101 42 1 7.5605 -5.1413 2.9482 43 1 6.3413 -6.6963 1.4825 44 1 8.3657 -7.8389 -2.0020 45 1 7.1440 -9.3866 -3.4730 46 1 4.6837 -9.3784 -3.5022 47 1 3.4335 -7.8247 -2.0618 48 1 4.0931 -1.3507 0.9619 49 1 3.9645 -0.1893 -0.4286 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_13158394.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:19:45 Heat of formation + Delta-G solvation = -28.929853 kcal Electronic energy + Delta-G solvation = -32966.796756 eV Core-core repulsion = 28632.573409 eV Total energy + Delta-G solvation = -4334.223348 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.162 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -41.83997 -41.29064 -40.33022 -39.59571 -38.46564 -37.54653 -34.71592 -34.51794 -34.12412 -33.41913 -32.13336 -30.84374 -29.05903 -27.14665 -26.80448 -26.53440 -24.19196 -23.47522 -23.10016 -22.19399 -21.86557 -21.37365 -20.29857 -18.73392 -18.38635 -18.34103 -18.00256 -17.66781 -17.25787 -17.05108 -16.89607 -16.52679 -16.37222 -16.05709 -15.72978 -15.71639 -15.36666 -15.16346 -15.08665 -14.78724 -14.56270 -14.44164 -14.14698 -13.96162 -13.77255 -13.72580 -13.57929 -13.42045 -13.30070 -12.97093 -12.92420 -12.53417 -12.25605 -12.11681 -12.04079 -11.78508 -11.72926 -11.65623 -11.03967 -10.95428 -10.68983 -10.42031 -10.19516 -10.11769 -10.07560 -9.78573 -9.29463 -5.02452 -0.20373 0.22067 0.36132 0.53750 1.25741 1.54466 1.56708 1.61373 1.92703 2.08248 2.48242 2.60337 2.81863 3.33461 3.35856 3.41038 3.48475 3.63668 3.69445 3.70406 3.77816 3.88312 3.88662 3.94624 3.99669 4.12871 4.21910 4.24512 4.30049 4.37752 4.45605 4.51475 4.53606 4.55395 4.64287 4.66370 4.74209 4.77392 4.84551 4.85799 4.89466 4.92025 5.02863 5.08210 5.21906 5.30151 5.34829 5.46770 5.52353 5.53833 5.58514 5.80648 5.85758 6.00698 6.44240 6.52142 6.89733 7.24966 7.31800 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.838 5.838 2 C 0.520 3.480 3 O -0.597 6.597 4 C -0.124 4.124 5 H 0.151 0.849 6 C -0.125 4.125 7 C 0.120 3.880 8 H 0.075 0.925 9 N -0.698 5.698 10 C 0.518 3.482 11 O -0.575 6.575 12 C -0.109 4.109 13 C -0.061 4.061 14 C -0.054 4.054 15 C -0.040 4.040 16 C -0.113 4.113 17 C -0.140 4.140 18 C -0.089 4.089 19 C -0.067 4.067 20 O -0.560 6.560 21 Si 0.760 3.240 22 C -0.085 4.085 23 C -0.108 4.108 24 C -0.123 4.123 25 C -0.126 4.126 26 C -0.123 4.123 27 C -0.113 4.113 28 C -0.122 4.122 29 H 0.418 0.582 30 H 0.404 0.596 31 H 0.082 0.918 32 H 0.096 0.904 33 H 0.419 0.581 34 H 0.140 0.860 35 H 0.125 0.875 36 H 0.114 0.886 37 H 0.107 0.893 38 H 0.102 0.898 39 H 0.404 0.596 40 H -0.302 1.302 41 H -0.297 1.297 42 H 0.153 0.847 43 H 0.157 0.843 44 H 0.121 0.879 45 H 0.138 0.862 46 H 0.143 0.857 47 H 0.144 0.856 48 H 0.093 0.907 49 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.892 -2.660 7.549 9.939 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.401 5.401 2 C 0.306 3.694 3 O -0.477 6.477 4 C -0.145 4.145 5 H 0.169 0.831 6 C -0.164 4.164 7 C 0.013 3.987 8 H 0.093 0.907 9 N -0.351 5.351 10 C 0.306 3.694 11 O -0.454 6.454 12 C -0.148 4.148 13 C -0.062 4.062 14 C -0.054 4.054 15 C -0.040 4.040 16 C -0.131 4.131 17 C -0.157 4.157 18 C -0.089 4.089 19 C -0.178 4.178 20 O -0.370 6.370 21 Si 0.669 3.331 22 C -0.103 4.103 23 C -0.126 4.126 24 C -0.141 4.141 25 C -0.144 4.144 26 C -0.141 4.141 27 C -0.131 4.131 28 C -0.161 4.161 29 H 0.250 0.750 30 H 0.235 0.765 31 H 0.101 0.899 32 H 0.114 0.886 33 H 0.257 0.743 34 H 0.158 0.842 35 H 0.143 0.857 36 H 0.132 0.868 37 H 0.125 0.875 38 H 0.120 0.880 39 H 0.256 0.744 40 H -0.230 1.230 41 H -0.225 1.225 42 H 0.171 0.829 43 H 0.174 0.826 44 H 0.139 0.861 45 H 0.156 0.844 46 H 0.161 0.839 47 H 0.162 0.838 48 H 0.112 0.888 49 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -5.072 -2.263 5.644 7.919 hybrid contribution -0.530 -0.067 -0.461 0.706 sum -5.603 -2.330 5.183 7.980 Atomic orbital electron populations 1.43820 1.06471 1.13758 1.76030 1.20912 0.83393 0.91211 0.73924 1.90749 1.69487 1.35519 1.51978 1.22865 0.95907 0.94685 1.01022 0.83113 1.23263 0.97031 1.01007 0.95106 1.21657 0.97735 0.82986 0.96293 0.90704 1.45486 1.62399 1.08158 1.19046 1.20939 0.75913 0.86639 0.85904 1.90739 1.48870 1.85027 1.20742 1.20971 1.04313 0.89957 0.99538 1.19463 0.91913 0.96691 0.98119 1.18707 0.92975 0.96230 0.97449 1.18873 0.95850 0.95495 0.93820 1.21139 0.96502 0.95882 0.99551 1.20901 1.00531 0.99903 0.94398 1.19717 0.97982 0.98647 0.92594 1.24617 0.98111 0.97631 0.97461 1.86442 1.61122 1.37725 1.51753 0.94750 0.78989 0.78910 0.80460 1.21198 0.94319 0.93761 1.01018 1.21526 1.00300 0.99214 0.91522 1.21333 1.00059 0.96260 0.96489 1.21356 0.95082 0.99118 0.98864 1.21510 0.94323 0.99186 0.99054 1.21263 1.00963 0.95372 0.95489 1.23156 0.94394 0.97832 1.00720 0.75018 0.76495 0.89937 0.88557 0.74302 0.84206 0.85705 0.86765 0.87523 0.88007 0.74450 1.23043 1.22503 0.82919 0.82591 0.86086 0.84385 0.83927 0.83794 0.88836 0.89696 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 5.27 8.87 -173.53 -1.54 3.73 16 2 C 0.52 0.51 7.63 87.66 0.67 1.17 16 3 O -0.60 -7.21 16.74 -3.02 -0.05 -7.26 16 4 C -0.12 0.65 4.03 -11.01 -0.04 0.61 16 5 H 0.15 -1.90 8.14 -2.39 -0.02 -1.92 16 6 C -0.12 0.42 7.43 31.12 0.23 0.65 16 7 C 0.12 -0.01 4.32 45.51 0.20 0.19 16 8 H 0.07 0.53 7.46 -2.39 -0.02 0.51 16 9 N -0.70 2.62 5.26 -440.05 -2.32 0.31 16 10 C 0.52 1.31 7.76 87.66 0.68 1.99 16 11 O -0.58 -7.71 15.65 -3.03 -0.05 -7.76 16 12 C -0.11 0.35 5.32 29.10 0.15 0.51 16 13 C -0.06 -0.19 4.38 -19.65 -0.09 -0.28 16 14 C -0.05 -0.34 5.40 -20.04 -0.11 -0.45 16 15 C -0.04 -0.26 4.88 -20.04 -0.10 -0.35 16 16 C -0.11 -1.11 9.62 22.48 0.22 -0.90 16 17 C -0.14 -1.31 8.65 22.24 0.19 -1.12 16 18 C -0.09 -0.48 5.39 -19.83 -0.11 -0.58 16 19 C -0.07 0.01 2.79 71.23 0.20 0.21 16 20 O -0.56 0.33 12.81 -148.98 -1.91 -1.58 16 21 Si 0.76 0.66 29.84 68.60 2.05 2.71 16 22 C -0.09 -0.14 9.67 22.24 0.21 0.07 16 23 C -0.11 -0.15 7.78 22.48 0.17 0.03 16 24 C -0.12 -0.81 9.62 22.48 0.22 -0.60 16 25 C -0.13 -0.51 10.03 22.24 0.22 -0.29 16 26 C -0.12 -0.30 10.04 22.31 0.22 -0.08 16 27 C -0.11 -0.23 9.66 22.24 0.21 -0.01 16 28 C -0.12 0.14 7.15 31.12 0.22 0.37 16 29 H 0.42 -5.47 8.83 -92.71 -0.82 -6.29 16 30 H 0.40 -2.53 8.93 -92.71 -0.83 -3.36 16 31 H 0.08 -0.02 8.09 -2.38 -0.02 -0.04 16 32 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 33 H 0.42 -4.74 8.70 -92.71 -0.81 -5.54 16 34 H 0.14 -1.43 8.04 -2.39 -0.02 -1.45 16 35 H 0.13 -0.83 4.69 -2.39 -0.01 -0.84 16 36 H 0.11 1.24 8.06 -2.91 -0.02 1.21 16 37 H 0.11 1.09 4.85 -2.91 -0.01 1.08 16 38 H 0.10 -0.54 7.96 -2.39 -0.02 -0.56 16 39 H 0.40 -4.48 8.74 -74.06 -0.65 -5.13 16 40 H -0.30 -2.78 7.04 99.48 0.70 -2.08 16 41 H -0.30 -2.31 7.11 99.48 0.71 -1.60 16 42 H 0.15 -0.48 8.06 -2.91 -0.02 -0.50 16 43 H 0.16 -0.69 7.08 -2.91 -0.02 -0.71 16 44 H 0.12 0.68 8.06 -2.91 -0.02 0.66 16 45 H 0.14 0.03 8.06 -2.91 -0.02 0.01 16 46 H 0.14 -0.30 8.06 -2.91 -0.02 -0.32 16 47 H 0.14 -0.43 8.06 -2.91 -0.02 -0.46 16 48 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 49 H 0.08 0.38 7.44 -2.39 -0.02 0.36 16 Total: 0.00 -34.42 408.45 -2.26 -36.68 By element: Atomic # 1 Polarization: -25.92 SS G_CDS: -2.03 Total: -27.95 kcal Atomic # 6 Polarization: -2.46 SS G_CDS: 3.59 Total: 1.13 kcal Atomic # 7 Polarization: 7.89 SS G_CDS: -3.86 Total: 4.04 kcal Atomic # 8 Polarization: -14.59 SS G_CDS: -2.01 Total: -16.60 kcal Atomic # 14 Polarization: 0.66 SS G_CDS: 2.05 Total: 2.71 kcal Total: -34.42 -2.26 -36.68 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13158394.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.747 kcal (2) G-P(sol) polarization free energy of solvation -34.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.670 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.260 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.677 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.930 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds