Wall clock time and date at job start Thu Mar 4 2021 13:19:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46508 * 1 3 3 N 1.28472 * 124.88092 * 2 1 4 4 C 1.31804 * 110.07089 * 180.02562 * 3 2 1 5 5 C 1.47713 * 126.51566 * 180.26544 * 4 3 2 6 6 O 1.21579 * 119.99612 * 179.68936 * 5 4 3 7 7 N 1.34767 * 120.00149 * 359.68773 * 5 4 3 8 8 C 1.46502 * 119.99999 * 180.02562 * 7 5 4 9 9 H 1.09000 * 112.85120 * 334.66398 * 8 7 5 10 10 C 1.53778 * 113.61783 * 105.86352 * 8 7 5 11 11 C 1.54051 * 86.98789 * 89.15724 * 10 8 7 12 12 H 1.08999 * 113.61549 * 270.88400 * 11 10 8 13 13 C 1.50704 * 113.61722 * 139.97823 * 11 10 8 14 14 N 1.34777 * 120.00060 * 82.51193 * 13 11 10 15 15 O 1.21283 * 120.00247 * 262.50861 * 13 11 10 16 16 C 1.53781 * 113.61198 * 203.46976 * 8 7 5 17 17 C 1.41505 * 106.96418 * 0.02562 * 4 3 2 18 18 C 1.35029 * 124.88602 * 180.02562 * 2 1 3 19 19 C 1.50695 * 126.38538 * 359.97438 * 18 2 1 20 20 O 1.42898 * 109.47488 * 29.98549 * 19 18 2 21 21 Si 1.86303 * 109.47100 * 149.98442 * 19 18 2 22 22 H 1.08999 * 109.46661 * 269.95842 * 1 2 3 23 23 H 1.08999 * 109.47394 * 29.95655 * 1 2 3 24 24 H 1.08995 * 109.46713 * 149.95902 * 1 2 3 25 25 H 0.96999 * 120.00298 * 359.97438 * 7 5 4 26 26 H 1.08999 * 113.61693 * 203.66596 * 10 8 7 27 27 H 1.09001 * 113.61271 * 334.56585 * 10 8 7 28 28 H 0.97002 * 119.99849 * 359.97438 * 14 13 11 29 29 H 0.96997 * 120.00195 * 180.02562 * 14 13 11 30 30 H 1.08999 * 113.61845 * 25.42875 * 16 8 7 31 31 H 1.09005 * 113.61515 * 156.33495 * 16 8 7 32 32 H 1.07997 * 127.24741 * 179.97438 * 17 4 3 33 33 H 1.08998 * 109.47148 * 269.98261 * 19 18 2 34 34 H 0.96694 * 114.00547 * 179.97438 * 20 19 18 35 35 H 1.48504 * 110.00073 * 178.68195 * 21 19 18 36 36 H 1.48498 * 110.00055 * 300.00092 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 7 2.1998 1.0539 0.0000 4 6 3.4740 0.7170 -0.0006 5 6 4.6272 1.6400 0.0048 6 8 5.7597 1.1978 0.0093 7 7 4.4240 2.9723 0.0045 8 6 5.5678 3.8877 0.0092 9 1 6.4639 3.4433 0.4423 10 6 5.8133 4.5740 -1.3449 11 6 4.8565 5.6818 -0.8649 12 1 3.8111 5.4912 -1.1075 13 6 5.3027 7.0707 -1.2434 14 7 5.0343 7.5531 -2.4729 15 8 5.9033 7.7543 -0.4416 16 6 5.2390 5.2815 0.5698 17 6 3.5272 -0.6971 -0.0015 18 6 2.2374 -1.1076 -0.0005 19 6 1.7535 -2.5348 -0.0006 20 8 0.4952 -2.6112 -0.6735 21 14 2.9942 -3.6111 -0.8799 22 1 -0.3632 -0.0007 1.0277 23 1 -0.3634 0.8904 -0.5131 24 1 -0.3632 -0.8896 -0.5145 25 1 3.5205 3.3251 0.0005 26 1 6.8399 4.9131 -1.4828 27 1 5.4356 4.0076 -2.1962 28 1 4.5542 7.0062 -3.1143 29 1 5.3218 8.4468 -2.7167 30 1 4.3980 5.2860 1.2632 31 1 6.1089 5.8139 0.9544 32 1 4.4109 -1.3179 -0.0026 33 1 1.6375 -2.8792 1.0270 34 1 0.1232 -3.5029 -0.7120 35 1 2.5441 -5.0261 -0.8591 36 1 3.1614 -3.1519 -2.2822 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_13259642.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:19:49 Heat of formation + Delta-G solvation = 7.612115 kcal Electronic energy + Delta-G solvation = -21692.652143 eV Core-core repulsion = 18181.367493 eV Total energy + Delta-G solvation = -3511.284651 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.121 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -43.75612 -41.55565 -40.07562 -38.39204 -38.22730 -34.63758 -34.49921 -33.97886 -32.66183 -28.78145 -27.42114 -26.77569 -26.64535 -24.32814 -22.18637 -22.05906 -20.92286 -20.23516 -18.87127 -18.60343 -18.32878 -17.79823 -17.36921 -17.33443 -16.86678 -16.24569 -16.04300 -15.82374 -15.33469 -15.20023 -14.92955 -14.83226 -14.39282 -14.12152 -13.76349 -13.55681 -13.44152 -13.27994 -13.00785 -12.82208 -12.36510 -11.83626 -11.76666 -11.61034 -11.15221 -11.02963 -10.80015 -10.65330 -10.17081 -9.95084 -9.87631 -5.03946 0.56150 0.81660 1.21348 1.45384 1.59016 1.65374 1.88472 2.11679 2.47232 2.57684 2.73503 3.29497 3.36103 3.43052 3.46434 3.73869 3.84873 4.00999 4.07939 4.15229 4.16403 4.32821 4.49605 4.56676 4.61417 4.70098 4.76093 4.82371 4.84707 4.91256 5.08982 5.34234 5.57180 5.67830 5.81095 6.06840 6.35136 6.47900 6.91106 7.27436 7.30685 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.260 5.260 3 N -0.259 5.259 4 C -0.017 4.017 5 C 0.611 3.389 6 O -0.524 6.524 7 N -0.703 5.703 8 C 0.121 3.879 9 H 0.113 0.887 10 C -0.133 4.133 11 C -0.143 4.143 12 H 0.114 0.886 13 C 0.527 3.473 14 N -0.855 5.855 15 O -0.541 6.541 16 C -0.121 4.121 17 C -0.174 4.174 18 C 0.027 3.973 19 C -0.050 4.050 20 O -0.543 6.543 21 Si 0.712 3.288 22 H 0.082 0.918 23 H 0.092 0.908 24 H 0.121 0.879 25 H 0.407 0.593 26 H 0.098 0.902 27 H 0.082 0.918 28 H 0.402 0.598 29 H 0.401 0.599 30 H 0.081 0.919 31 H 0.112 0.888 32 H 0.173 0.827 33 H 0.088 0.912 34 H 0.388 0.612 35 H -0.254 1.254 36 H -0.251 1.251 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.265 -3.807 -1.377 6.642 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.049 5.049 3 N -0.096 5.096 4 C -0.176 4.176 5 C 0.396 3.604 6 O -0.398 6.398 7 N -0.355 5.355 8 C 0.016 3.984 9 H 0.131 0.869 10 C -0.172 4.172 11 C -0.164 4.164 12 H 0.132 0.868 13 C 0.312 3.688 14 N -0.418 5.418 15 O -0.417 6.417 16 C -0.160 4.160 17 C -0.201 4.201 18 C -0.098 4.098 19 C -0.160 4.160 20 O -0.352 6.352 21 Si 0.610 3.390 22 H 0.100 0.900 23 H 0.111 0.889 24 H 0.139 0.861 25 H 0.243 0.757 26 H 0.117 0.883 27 H 0.100 0.900 28 H 0.230 0.770 29 H 0.232 0.768 30 H 0.100 0.900 31 H 0.130 0.870 32 H 0.190 0.810 33 H 0.106 0.894 34 H 0.238 0.762 35 H -0.178 1.178 36 H -0.175 1.175 Dipole moment (debyes) X Y Z Total from point charges -4.673 -2.824 -1.447 5.649 hybrid contribution -1.569 -0.570 -0.591 1.771 sum -6.242 -3.394 -2.038 7.392 Atomic orbital electron populations 1.22553 0.72494 1.06604 1.04630 1.45314 1.08058 1.02104 1.49415 1.73489 1.02879 1.14133 1.19110 1.21693 0.90696 0.93728 1.11477 1.16818 0.86613 0.81236 0.75711 1.90827 1.22456 1.76979 1.49531 1.45505 1.09844 1.05124 1.74983 1.21842 0.90536 0.89401 0.96647 0.86933 1.23415 0.99965 0.95213 0.98620 1.22923 1.01608 0.92039 0.99867 0.86840 1.20471 0.78341 0.88389 0.81640 1.43916 1.61560 1.20755 1.15590 1.90764 1.40872 1.59883 1.50187 1.23239 1.03912 0.94197 0.94613 1.21350 0.96015 0.93788 1.08987 1.20747 0.90923 0.89177 1.08932 1.24415 0.93353 0.96047 1.02166 1.86382 1.34384 1.34795 1.79643 0.94172 0.85912 0.76478 0.82456 0.89974 0.88943 0.86093 0.75732 0.88343 0.89982 0.76985 0.76785 0.90041 0.86970 0.80980 0.89405 0.76168 1.17826 1.17471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.14 11.00 59.85 0.66 0.52 16 2 N -0.26 -0.35 3.70 -63.85 -0.24 -0.58 16 3 N -0.26 -0.64 11.67 33.42 0.39 -0.25 16 4 C -0.02 -0.05 7.13 -82.76 -0.59 -0.64 16 5 C 0.61 2.08 7.82 -12.39 -0.10 1.98 16 6 O -0.52 -3.25 16.54 5.30 0.09 -3.16 16 7 N -0.70 -0.46 5.26 -54.00 -0.28 -0.74 16 8 C 0.12 0.02 4.30 -67.12 -0.29 -0.26 16 9 H 0.11 0.17 7.50 -51.93 -0.39 -0.22 16 10 C -0.13 0.12 7.45 -25.78 -0.19 -0.07 16 11 C -0.14 0.16 4.04 -90.81 -0.37 -0.21 16 12 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 13 C 0.53 0.66 7.63 -10.98 -0.08 0.57 16 14 N -0.86 1.64 8.87 31.22 0.28 1.91 16 15 O -0.54 -3.16 16.74 5.55 0.09 -3.07 16 16 C -0.12 0.03 7.15 -25.92 -0.19 -0.15 16 17 C -0.17 -0.30 9.35 -39.36 -0.37 -0.67 16 18 C 0.03 0.02 6.21 -82.21 -0.51 -0.49 16 19 C -0.05 0.10 2.98 36.00 0.11 0.21 16 20 O -0.54 1.36 9.76 -35.23 -0.34 1.01 16 21 Si 0.71 -1.54 31.23 -169.99 -5.31 -6.85 16 22 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 23 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 16 24 H 0.12 -0.27 5.19 -51.93 -0.27 -0.54 16 25 H 0.41 -0.33 8.43 -40.82 -0.34 -0.68 16 26 H 0.10 -0.06 8.10 -51.93 -0.42 -0.48 16 27 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 28 H 0.40 -1.86 8.83 -40.82 -0.36 -2.22 16 29 H 0.40 -0.90 8.93 -40.82 -0.36 -1.26 16 30 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.11 0.12 7.43 -51.93 -0.39 -0.27 16 32 H 0.17 -0.05 7.02 -52.49 -0.37 -0.42 16 33 H 0.09 -0.34 7.96 -51.93 -0.41 -0.76 16 34 H 0.39 -2.47 8.74 45.56 0.40 -2.07 16 35 H -0.25 0.20 7.11 56.52 0.40 0.61 16 36 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 LS Contribution 311.89 15.07 4.70 4.70 Total: 0.00 -10.92 311.89 -6.77 -17.69 By element: Atomic # 1 Polarization: -7.23 SS G_CDS: -4.23 Total: -11.46 kcal Atomic # 6 Polarization: 2.71 SS G_CDS: -1.92 Total: 0.79 kcal Atomic # 7 Polarization: 0.20 SS G_CDS: 0.15 Total: 0.34 kcal Atomic # 8 Polarization: -5.05 SS G_CDS: -0.16 Total: -5.21 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: -5.31 Total: -6.85 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -10.92 -6.77 -17.69 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13259642.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.304 kcal (2) G-P(sol) polarization free energy of solvation -10.920 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.383 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.771 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.692 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.612 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds