Wall clock time and date at job start Thu Mar 4 2021 13:19:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46508 * 1 3 3 N 1.28472 * 124.88092 * 2 1 4 4 C 1.31804 * 110.07089 * 180.02562 * 3 2 1 5 5 C 1.47713 * 126.51566 * 180.26544 * 4 3 2 6 6 O 1.21579 * 119.99612 * 179.68936 * 5 4 3 7 7 N 1.34767 * 120.00149 * 359.68773 * 5 4 3 8 8 C 1.46502 * 119.99999 * 180.02562 * 7 5 4 9 9 H 1.09000 * 112.85120 * 334.66398 * 8 7 5 10 10 C 1.53778 * 113.61783 * 105.86352 * 8 7 5 11 11 C 1.54051 * 86.98789 * 89.15724 * 10 8 7 12 12 H 1.08999 * 113.61549 * 270.88400 * 11 10 8 13 13 C 1.50704 * 113.61722 * 139.97823 * 11 10 8 14 14 N 1.34777 * 120.00060 * 82.51193 * 13 11 10 15 15 O 1.21283 * 120.00247 * 262.50861 * 13 11 10 16 16 C 1.53781 * 113.61198 * 203.46976 * 8 7 5 17 17 C 1.41505 * 106.96418 * 0.02562 * 4 3 2 18 18 C 1.35029 * 124.88602 * 180.02562 * 2 1 3 19 19 C 1.50695 * 126.38538 * 359.97438 * 18 2 1 20 20 O 1.42898 * 109.47488 * 29.98549 * 19 18 2 21 21 Si 1.86303 * 109.47100 * 149.98442 * 19 18 2 22 22 H 1.08999 * 109.46661 * 269.95842 * 1 2 3 23 23 H 1.08999 * 109.47394 * 29.95655 * 1 2 3 24 24 H 1.08995 * 109.46713 * 149.95902 * 1 2 3 25 25 H 0.96999 * 120.00298 * 359.97438 * 7 5 4 26 26 H 1.08999 * 113.61693 * 203.66596 * 10 8 7 27 27 H 1.09001 * 113.61271 * 334.56585 * 10 8 7 28 28 H 0.97002 * 119.99849 * 359.97438 * 14 13 11 29 29 H 0.96997 * 120.00195 * 180.02562 * 14 13 11 30 30 H 1.08999 * 113.61845 * 25.42875 * 16 8 7 31 31 H 1.09005 * 113.61515 * 156.33495 * 16 8 7 32 32 H 1.07997 * 127.24741 * 179.97438 * 17 4 3 33 33 H 1.08998 * 109.47148 * 269.98261 * 19 18 2 34 34 H 0.96694 * 114.00547 * 179.97438 * 20 19 18 35 35 H 1.48504 * 110.00073 * 178.68195 * 21 19 18 36 36 H 1.48498 * 110.00055 * 300.00092 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 7 2.1998 1.0539 0.0000 4 6 3.4740 0.7170 -0.0006 5 6 4.6272 1.6400 0.0048 6 8 5.7597 1.1978 0.0093 7 7 4.4240 2.9723 0.0045 8 6 5.5678 3.8877 0.0092 9 1 6.4639 3.4433 0.4423 10 6 5.8133 4.5740 -1.3449 11 6 4.8565 5.6818 -0.8649 12 1 3.8111 5.4912 -1.1075 13 6 5.3027 7.0707 -1.2434 14 7 5.0343 7.5531 -2.4729 15 8 5.9033 7.7543 -0.4416 16 6 5.2390 5.2815 0.5698 17 6 3.5272 -0.6971 -0.0015 18 6 2.2374 -1.1076 -0.0005 19 6 1.7535 -2.5348 -0.0006 20 8 0.4952 -2.6112 -0.6735 21 14 2.9942 -3.6111 -0.8799 22 1 -0.3632 -0.0007 1.0277 23 1 -0.3634 0.8904 -0.5131 24 1 -0.3632 -0.8896 -0.5145 25 1 3.5205 3.3251 0.0005 26 1 6.8399 4.9131 -1.4828 27 1 5.4356 4.0076 -2.1962 28 1 4.5542 7.0062 -3.1143 29 1 5.3218 8.4468 -2.7167 30 1 4.3980 5.2860 1.2632 31 1 6.1089 5.8139 0.9544 32 1 4.4109 -1.3179 -0.0026 33 1 1.6375 -2.8792 1.0270 34 1 0.1232 -3.5029 -0.7120 35 1 2.5441 -5.0261 -0.8591 36 1 3.1614 -3.1519 -2.2822 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_13259642.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:19:48 Heat of formation + Delta-G solvation = 0.241264 kcal Electronic energy + Delta-G solvation = -21692.971768 eV Core-core repulsion = 18181.367493 eV Total energy + Delta-G solvation = -3511.604275 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.121 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -43.80818 -41.63462 -40.26776 -38.48687 -38.07613 -34.73837 -34.55217 -34.02313 -32.66474 -28.77472 -27.40657 -26.76850 -26.57810 -24.40609 -22.24155 -22.13703 -20.98796 -20.28386 -18.69987 -18.59048 -18.32538 -17.82206 -17.42668 -17.36180 -16.92621 -16.15174 -16.13005 -15.90481 -15.42902 -15.30572 -14.94257 -14.79308 -14.46134 -14.06489 -13.70623 -13.53157 -13.36686 -13.31490 -12.96494 -12.82620 -12.40143 -11.85472 -11.77298 -11.62771 -11.35230 -10.98672 -10.93631 -10.67838 -10.29848 -10.01669 -9.86089 -4.87098 0.43971 0.81574 1.27707 1.55029 1.57098 1.66433 1.98543 2.04380 2.28742 2.61872 2.94995 3.27439 3.36138 3.43079 3.53024 3.73059 3.91495 4.05383 4.25101 4.31432 4.38450 4.39021 4.50065 4.56839 4.67673 4.71494 4.78887 4.84937 4.86414 4.92708 5.05867 5.27796 5.49817 5.69510 5.87008 6.36277 6.44392 6.50878 6.83339 7.10662 7.32371 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.071 3.929 2 N -0.264 5.264 3 N -0.266 5.266 4 C -0.039 4.039 5 C 0.609 3.391 6 O -0.561 6.561 7 N -0.689 5.689 8 C 0.119 3.881 9 H 0.096 0.904 10 C -0.125 4.125 11 C -0.131 4.131 12 H 0.140 0.860 13 C 0.523 3.477 14 N -0.839 5.839 15 O -0.593 6.593 16 C -0.119 4.119 17 C -0.191 4.191 18 C 0.024 3.976 19 C -0.046 4.046 20 O -0.553 6.553 21 Si 0.775 3.225 22 H 0.096 0.904 23 H 0.099 0.901 24 H 0.127 0.873 25 H 0.416 0.584 26 H 0.094 0.906 27 H 0.089 0.911 28 H 0.417 0.583 29 H 0.405 0.595 30 H 0.089 0.911 31 H 0.096 0.904 32 H 0.184 0.816 33 H 0.116 0.884 34 H 0.406 0.594 35 H -0.266 1.266 36 H -0.310 1.310 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.906 -4.385 -1.480 8.313 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 N -0.053 5.053 3 N -0.104 5.104 4 C -0.197 4.197 5 C 0.395 3.605 6 O -0.438 6.438 7 N -0.340 5.340 8 C 0.013 3.987 9 H 0.114 0.886 10 C -0.164 4.164 11 C -0.152 4.152 12 H 0.158 0.842 13 C 0.308 3.692 14 N -0.402 5.402 15 O -0.474 6.474 16 C -0.158 4.158 17 C -0.219 4.219 18 C -0.101 4.101 19 C -0.156 4.156 20 O -0.365 6.365 21 Si 0.678 3.322 22 H 0.115 0.885 23 H 0.118 0.882 24 H 0.145 0.855 25 H 0.253 0.747 26 H 0.113 0.887 27 H 0.108 0.892 28 H 0.248 0.752 29 H 0.236 0.764 30 H 0.108 0.892 31 H 0.115 0.885 32 H 0.201 0.799 33 H 0.134 0.866 34 H 0.259 0.741 35 H -0.192 1.192 36 H -0.237 1.237 Dipole moment (debyes) X Y Z Total from point charges -6.370 -3.403 -1.571 7.391 hybrid contribution -1.122 -0.402 -0.650 1.357 sum -7.492 -3.805 -2.221 8.691 Atomic orbital electron populations 1.22789 0.70884 1.07300 1.05799 1.45680 1.09059 1.01974 1.48602 1.73433 1.02700 1.14800 1.19491 1.21749 0.90854 0.94328 1.12754 1.16970 0.86309 0.81944 0.75282 1.90798 1.23745 1.77671 1.51566 1.45400 1.10409 1.04380 1.73787 1.21826 0.89931 0.89335 0.97598 0.88569 1.23344 0.99971 0.94961 0.98123 1.22929 1.02797 0.90536 0.98933 0.84223 1.20834 0.77623 0.88845 0.81871 1.43821 1.60437 1.21001 1.14896 1.90744 1.43420 1.61365 1.51877 1.23161 1.03658 0.93459 0.95475 1.21648 0.97125 0.93651 1.09426 1.21165 0.90702 0.90375 1.07858 1.24433 0.93438 0.93999 1.03726 1.86333 1.33952 1.36566 1.79655 0.93348 0.85066 0.74827 0.78961 0.88538 0.88222 0.85497 0.74671 0.88748 0.89198 0.75155 0.76435 0.89199 0.88518 0.79909 0.86637 0.74069 1.19194 1.23736 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.34 11.00 127.77 1.41 1.07 16 2 N -0.26 -0.56 3.70 -355.93 -1.32 -1.88 16 3 N -0.27 -1.31 11.67 -48.17 -0.56 -1.87 16 4 C -0.04 -0.26 7.13 42.46 0.30 0.04 16 5 C 0.61 4.86 7.82 86.75 0.68 5.54 16 6 O -0.56 -7.97 16.54 -3.97 -0.07 -8.04 16 7 N -0.69 -1.25 5.26 -443.03 -2.33 -3.59 16 8 C 0.12 0.15 4.30 45.52 0.20 0.35 16 9 H 0.10 0.48 7.50 -2.39 -0.02 0.46 16 10 C -0.12 0.20 7.45 31.21 0.23 0.43 16 11 C -0.13 0.33 4.04 -10.92 -0.04 0.29 16 12 H 0.14 -1.08 8.14 -2.39 -0.02 -1.10 16 13 C 0.52 1.37 7.63 87.66 0.67 2.04 16 14 N -0.84 3.71 8.87 -173.53 -1.54 2.17 16 15 O -0.59 -7.67 16.74 -3.04 -0.05 -7.72 16 16 C -0.12 -0.02 7.15 31.12 0.22 0.21 16 17 C -0.19 -0.76 9.35 22.41 0.21 -0.55 16 18 C 0.02 0.03 6.21 41.40 0.26 0.29 16 19 C -0.05 0.25 2.98 71.23 0.21 0.46 16 20 O -0.55 3.59 9.76 -148.98 -1.45 2.13 16 21 Si 0.77 -3.39 31.23 68.60 2.14 -1.24 16 22 H 0.10 -0.73 8.14 -2.39 -0.02 -0.75 16 23 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 24 H 0.13 -0.74 5.19 -2.39 -0.01 -0.76 16 25 H 0.42 -0.76 8.43 -92.71 -0.78 -1.54 16 26 H 0.09 -0.04 8.10 -2.39 -0.02 -0.06 16 27 H 0.09 -0.25 8.14 -2.39 -0.02 -0.27 16 28 H 0.42 -4.43 8.83 -92.71 -0.82 -5.25 16 29 H 0.40 -1.95 8.93 -92.71 -0.83 -2.78 16 30 H 0.09 -0.15 8.14 -2.39 -0.02 -0.16 16 31 H 0.10 0.38 7.43 -2.38 -0.02 0.36 16 32 H 0.18 0.05 7.02 -2.91 -0.02 0.03 16 33 H 0.12 -1.19 7.96 -2.39 -0.02 -1.21 16 34 H 0.41 -5.90 8.74 -74.06 -0.65 -6.55 16 35 H -0.27 0.60 7.11 99.48 0.71 1.30 16 36 H -0.31 -1.73 7.11 99.48 0.71 -1.02 16 Total: 0.00 -27.11 311.89 -2.70 -29.81 By element: Atomic # 1 Polarization: -18.07 SS G_CDS: -1.87 Total: -19.94 kcal Atomic # 6 Polarization: 5.82 SS G_CDS: 4.34 Total: 10.16 kcal Atomic # 7 Polarization: 0.59 SS G_CDS: -5.75 Total: -5.16 kcal Atomic # 8 Polarization: -12.05 SS G_CDS: -1.57 Total: -13.63 kcal Atomic # 14 Polarization: -3.39 SS G_CDS: 2.14 Total: -1.24 kcal Total: -27.11 -2.70 -29.81 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13259642.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.049 kcal (2) G-P(sol) polarization free energy of solvation -27.106 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.943 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.701 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.807 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.241 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds