Wall clock time and date at job start Thu Mar 4 2021 13:19:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34783 * 1 3 3 O 1.21279 * 120.00172 * 2 1 4 4 C 1.50698 * 120.00093 * 179.97438 * 2 1 3 5 5 H 1.09001 * 112.84918 * 311.20261 * 4 2 1 6 6 C 1.53785 * 113.61448 * 82.50329 * 4 2 1 7 7 C 1.53781 * 87.07919 * 139.98108 * 6 4 2 8 8 H 1.08997 * 113.69061 * 220.00439 * 7 6 4 9 9 N 1.46500 * 113.61345 * 89.11865 * 7 6 4 10 10 C 1.34783 * 120.00143 * 107.49751 * 9 7 6 11 11 O 1.21580 * 119.99686 * 0.02562 * 10 9 7 12 12 C 1.47562 * 119.99707 * 179.97438 * 10 9 7 13 13 C 1.39415 * 120.12699 * 0.03118 * 12 10 9 14 14 C 1.39220 * 119.76302 * 179.97438 * 13 12 10 15 15 C 1.47815 * 120.00149 * 180.02562 * 14 13 12 16 16 C 1.35931 * 125.92655 * 179.97438 * 15 14 13 17 17 C 1.40967 * 106.74027 * 179.97438 * 16 15 14 18 18 C 1.34702 * 107.03264 * 359.97438 * 17 16 15 19 19 C 1.50696 * 125.67167 * 180.02562 * 18 17 16 20 20 O 1.42906 * 109.47211 * 300.00609 * 19 18 17 21 21 Si 1.86296 * 109.47385 * 180.02562 * 19 18 17 22 22 O 1.34352 * 108.66426 * 359.77352 * 18 17 16 23 23 C 1.39804 * 119.99380 * 0.02562 * 14 13 12 24 24 C 1.37815 * 120.24654 * 359.97438 * 23 14 13 25 25 C 1.38769 * 120.24627 * 0.02562 * 24 23 14 26 26 O 1.35648 * 120.00501 * 179.97438 * 25 24 23 27 27 C 1.53774 * 113.61510 * 180.02562 * 4 2 1 28 28 H 0.96998 * 119.99715 * 179.97438 * 1 2 3 29 29 H 0.96999 * 119.99750 * 0.02562 * 1 2 3 30 30 H 1.08997 * 113.61068 * 25.43390 * 6 4 2 31 31 H 1.09002 * 113.61131 * 254.53380 * 6 4 2 32 32 H 0.96998 * 119.99763 * 287.50235 * 9 7 6 33 33 H 1.08005 * 120.11971 * 359.97438 * 13 12 10 34 34 H 1.08001 * 126.63392 * 359.96624 * 16 15 14 35 35 H 1.08003 * 126.48616 * 180.02562 * 17 16 15 36 36 H 1.09002 * 109.46906 * 59.99968 * 19 18 17 37 37 H 0.96696 * 113.99450 * 299.99670 * 20 19 18 38 38 H 1.48503 * 110.00045 * 58.68665 * 21 19 18 39 39 H 1.48507 * 109.99684 * 180.02562 * 21 19 18 40 40 H 1.08003 * 119.87680 * 180.27482 * 23 14 13 41 41 H 1.08006 * 119.87593 * 180.02562 * 24 23 14 42 42 H 0.96702 * 113.99445 * 90.00256 * 26 25 24 43 43 H 1.08996 * 113.61833 * 105.47198 * 27 4 2 44 44 H 1.09003 * 113.61720 * 334.56419 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 0.0006 5 1 1.7400 -2.0021 0.7567 6 6 2.2502 -1.9311 -1.3962 7 6 3.6826 -2.3120 -0.9865 8 1 4.4152 -2.1817 -1.7830 9 7 3.7782 -3.6204 -0.3343 10 6 4.3240 -4.6628 -0.9916 11 8 4.7374 -4.5172 -2.1257 12 6 4.4207 -5.9804 -0.3344 13 6 3.9478 -6.1501 0.9661 14 6 4.0424 -7.3967 1.5787 15 6 3.5422 -7.5827 2.9572 16 6 3.5732 -8.7413 3.6674 17 6 2.9966 -8.4632 4.9233 18 6 2.6465 -7.1625 4.9175 19 6 1.9923 -6.4234 6.0562 20 8 0.7400 -7.0382 6.3663 21 14 1.7073 -4.6496 5.5631 22 8 2.9825 -6.6321 3.7297 23 6 4.6105 -8.4726 0.8901 24 6 5.0780 -8.3049 -0.3955 25 6 4.9888 -7.0668 -1.0158 26 8 5.4509 -6.9072 -2.2811 27 6 3.6295 -1.1340 0.0011 28 1 -0.4849 -0.8401 -0.0004 29 1 -0.4850 0.8401 -0.0004 30 1 2.2066 -1.2043 -2.2072 31 1 1.6000 -2.7903 -1.5610 32 1 3.4486 -3.7364 0.5705 33 1 3.5097 -5.3175 1.4964 34 1 3.9640 -9.6913 3.3340 35 1 2.8618 -9.1608 5.7367 36 1 2.6405 -6.4579 6.9318 37 1 0.1119 -7.0435 5.6312 38 1 0.8504 -4.5906 4.3517 39 1 1.0631 -3.9098 6.6781 40 1 4.6789 -9.4399 1.3655 41 1 5.5154 -9.1403 -0.9221 42 1 4.7895 -7.0774 -2.9657 43 1 4.0928 -1.3500 0.9638 44 1 3.9634 -0.1892 -0.4279 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_13259648.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:19:51 Heat of formation + Delta-G solvation = -74.160202 kcal Electronic energy + Delta-G solvation = -31476.777480 eV Core-core repulsion = 26942.529792 eV Total energy + Delta-G solvation = -4534.247688 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.129 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -43.67300 -41.89827 -41.09532 -39.76397 -38.42683 -38.16380 -37.79094 -34.74966 -34.49588 -34.06358 -32.72059 -32.16812 -30.02676 -27.50098 -26.77512 -26.37615 -25.25853 -23.60344 -23.00763 -22.27384 -21.85186 -21.20590 -20.35132 -19.57992 -19.18062 -18.62696 -18.22445 -17.80747 -17.56269 -17.46532 -17.12101 -16.64794 -16.48659 -16.32081 -16.01062 -15.93814 -15.77634 -15.45552 -15.30243 -14.83661 -14.46591 -14.36833 -14.32444 -13.93170 -13.77992 -13.69326 -13.49964 -13.32245 -13.20186 -13.09825 -12.92639 -12.85034 -12.11550 -11.90810 -11.74378 -11.61946 -11.04526 -10.97046 -10.90703 -10.80082 -10.68655 -10.44346 -10.30238 -10.06997 -8.87867 -4.93132 -0.53810 -0.18507 0.79051 1.18136 1.49416 1.50795 1.56847 1.71246 1.87380 1.94321 1.95718 2.60723 2.64971 3.13377 3.23197 3.31401 3.35102 3.42182 3.50793 3.67425 3.74608 3.89175 3.93254 4.04121 4.08378 4.23454 4.24905 4.37544 4.46473 4.55533 4.66226 4.67903 4.70984 4.77236 4.82830 4.85205 4.90577 4.92550 5.04574 5.05471 5.17203 5.23288 5.46298 5.49770 5.53148 5.85984 6.00113 6.37469 6.41424 6.44179 6.75016 7.12513 7.31850 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.840 5.840 2 C 0.521 3.479 3 O -0.594 6.594 4 C -0.131 4.131 5 H 0.145 0.855 6 C -0.125 4.125 7 C 0.120 3.880 8 H 0.089 0.911 9 N -0.696 5.696 10 C 0.561 3.439 11 O -0.556 6.556 12 C -0.178 4.178 13 C -0.048 4.048 14 C -0.041 4.041 15 C 0.026 3.974 16 C -0.191 4.191 17 C -0.183 4.183 18 C -0.052 4.052 19 C -0.040 4.040 20 O -0.536 6.536 21 Si 0.770 3.230 22 O -0.169 6.169 23 C -0.045 4.045 24 C -0.148 4.148 25 C 0.164 3.836 26 O -0.495 6.495 27 C -0.121 4.121 28 H 0.417 0.583 29 H 0.404 0.596 30 H 0.089 0.911 31 H 0.092 0.908 32 H 0.413 0.587 33 H 0.153 0.847 34 H 0.173 0.827 35 H 0.159 0.841 36 H 0.149 0.851 37 H 0.390 0.610 38 H -0.277 1.277 39 H -0.289 1.289 40 H 0.163 0.837 41 H 0.162 0.838 42 H 0.410 0.590 43 H 0.095 0.905 44 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.945 -5.480 2.929 7.360 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.402 5.402 2 C 0.307 3.693 3 O -0.474 6.474 4 C -0.152 4.152 5 H 0.162 0.838 6 C -0.164 4.164 7 C 0.014 3.986 8 H 0.107 0.893 9 N -0.349 5.349 10 C 0.349 3.651 11 O -0.435 6.435 12 C -0.181 4.181 13 C -0.067 4.067 14 C -0.041 4.041 15 C -0.024 4.024 16 C -0.210 4.210 17 C -0.203 4.203 18 C -0.102 4.102 19 C -0.149 4.149 20 O -0.345 6.345 21 Si 0.672 3.328 22 O -0.067 6.067 23 C -0.063 4.063 24 C -0.166 4.166 25 C 0.118 3.882 26 O -0.309 6.309 27 C -0.160 4.160 28 H 0.248 0.752 29 H 0.235 0.765 30 H 0.108 0.892 31 H 0.111 0.889 32 H 0.252 0.748 33 H 0.171 0.829 34 H 0.190 0.810 35 H 0.177 0.823 36 H 0.166 0.834 37 H 0.240 0.760 38 H -0.203 1.203 39 H -0.216 1.216 40 H 0.181 0.819 41 H 0.180 0.820 42 H 0.271 0.729 43 H 0.114 0.886 44 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -2.964 -3.820 2.738 5.557 hybrid contribution -1.902 -0.939 -0.119 2.125 sum -4.866 -4.760 2.619 7.294 Atomic orbital electron populations 1.43837 1.06570 1.13695 1.76141 1.20878 0.83316 0.91190 0.73925 1.90750 1.69406 1.35410 1.51868 1.22908 0.96431 0.94704 1.01158 0.83760 1.23287 0.96995 1.01013 0.95114 1.21754 0.98094 0.82150 0.96556 0.89270 1.45458 1.62005 1.08568 1.18869 1.18243 0.77000 0.84398 0.85413 1.90821 1.48641 1.84598 1.19458 1.20208 1.06968 0.94303 0.96663 1.21425 0.95559 0.97455 0.92265 1.17678 1.02483 0.94747 0.89230 1.20405 1.02711 0.87423 0.91853 1.22145 1.05110 0.99541 0.94230 1.21774 1.02896 0.96045 0.99547 1.23015 1.05696 0.94674 0.86835 1.24538 0.86673 1.07510 0.96196 1.86649 1.24711 1.80825 1.42272 0.93663 0.88495 0.73530 0.77080 1.83891 1.61619 1.38228 1.22969 1.21414 0.92912 0.99001 0.92970 1.21562 1.02091 0.96877 0.96073 1.18896 0.91264 0.91533 0.86553 1.84715 1.40677 1.92112 1.13403 1.23192 0.93901 0.98000 1.00891 0.75157 0.76489 0.89238 0.88904 0.74830 0.82908 0.81001 0.82334 0.83387 0.75999 1.20270 1.21623 0.81905 0.82049 0.72883 0.88642 0.88960 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 4.96 8.87 -173.53 -1.54 3.42 16 2 C 0.52 0.49 7.63 87.66 0.67 1.16 16 3 O -0.59 -6.90 16.74 -3.02 -0.05 -6.95 16 4 C -0.13 0.66 4.02 -11.01 -0.04 0.62 16 5 H 0.14 -1.64 8.14 -2.39 -0.02 -1.66 16 6 C -0.13 0.49 7.43 31.12 0.23 0.72 16 7 C 0.12 -0.13 4.33 45.53 0.20 0.07 16 8 H 0.09 0.37 7.46 -2.39 -0.02 0.35 16 9 N -0.70 1.83 5.21 -443.11 -2.31 -0.48 16 10 C 0.56 2.19 7.76 86.70 0.67 2.86 16 11 O -0.56 -6.68 14.74 17.02 0.25 -6.43 16 12 C -0.18 -0.14 5.88 -20.04 -0.12 -0.26 16 13 C -0.05 0.16 9.20 22.79 0.21 0.37 16 14 C -0.04 0.13 5.87 -20.13 -0.12 0.01 16 15 C 0.03 -0.05 7.03 24.27 0.17 0.12 16 16 C -0.19 0.54 10.26 22.40 0.23 0.77 16 17 C -0.18 0.30 10.77 22.13 0.24 0.54 16 18 C -0.05 0.11 6.22 24.87 0.15 0.26 16 19 C -0.04 0.17 2.98 71.23 0.21 0.38 16 20 O -0.54 0.86 12.87 -148.98 -1.92 -1.06 16 21 Si 0.77 -3.93 32.10 68.60 2.20 -1.73 16 22 O -0.17 0.31 8.78 -6.54 -0.06 0.25 16 23 C -0.04 0.24 9.54 22.55 0.22 0.45 16 24 C -0.15 0.53 9.96 22.30 0.22 0.75 16 25 C 0.16 0.22 6.72 22.89 0.15 0.37 16 26 O -0.50 -1.95 11.55 -68.64 -0.79 -2.74 16 27 C -0.12 0.25 7.15 31.13 0.22 0.48 16 28 H 0.42 -5.13 8.83 -92.71 -0.82 -5.95 16 29 H 0.40 -2.42 8.93 -92.71 -0.83 -3.25 16 30 H 0.09 -0.16 8.09 -2.39 -0.02 -0.17 16 31 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 32 H 0.41 -3.55 6.73 -92.71 -0.62 -4.17 16 33 H 0.15 -1.23 6.24 -2.91 -0.02 -1.25 16 34 H 0.17 -1.29 7.25 -2.91 -0.02 -1.31 16 35 H 0.16 -0.50 8.06 -2.91 -0.02 -0.53 16 36 H 0.15 -1.01 7.96 -2.39 -0.02 -1.03 16 37 H 0.39 -2.77 8.70 -74.06 -0.64 -3.41 16 38 H -0.28 0.43 7.11 99.48 0.71 1.14 16 39 H -0.29 -0.49 7.11 99.48 0.71 0.22 16 40 H 0.16 -1.70 6.96 -2.91 -0.02 -1.72 16 41 H 0.16 -1.18 8.06 -2.91 -0.02 -1.20 16 42 H 0.41 -1.34 9.06 -74.06 -0.67 -2.01 16 43 H 0.10 -0.46 8.14 -2.39 -0.02 -0.48 16 44 H 0.09 0.24 7.43 -2.39 -0.02 0.23 16 Total: 0.00 -29.70 382.00 -3.11 -32.80 By element: Atomic # 1 Polarization: -24.35 SS G_CDS: -2.41 Total: -26.76 kcal Atomic # 6 Polarization: 6.15 SS G_CDS: 3.52 Total: 9.67 kcal Atomic # 7 Polarization: 6.79 SS G_CDS: -3.85 Total: 2.94 kcal Atomic # 8 Polarization: -14.36 SS G_CDS: -2.57 Total: -16.93 kcal Atomic # 14 Polarization: -3.93 SS G_CDS: 2.20 Total: -1.73 kcal Total: -29.70 -3.11 -32.80 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13259648.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.359 kcal (2) G-P(sol) polarization free energy of solvation -29.696 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.055 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.105 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.801 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.160 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds