Wall clock time and date at job start Thu Mar 4 2021 13:20:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34781 * 1 3 3 O 1.21275 * 120.00280 * 2 1 4 4 C 1.50709 * 119.99655 * 179.97438 * 2 1 3 5 5 H 1.09002 * 112.84823 * 48.80651 * 4 2 1 6 6 C 1.53783 * 113.61032 * 180.02562 * 4 2 1 7 7 C 1.53777 * 87.07778 * 89.20033 * 6 4 2 8 8 H 1.09003 * 113.61925 * 270.79399 * 7 6 4 9 9 N 1.46503 * 113.61250 * 139.98244 * 7 6 4 10 10 C 1.34773 * 120.00404 * 154.99969 * 9 7 6 11 11 O 1.21564 * 119.99752 * 359.97438 * 10 9 7 12 12 C 1.47834 * 120.00468 * 179.97438 * 10 9 7 13 13 C 1.39986 * 120.56600 * 179.97438 * 12 10 9 14 14 C 1.38394 * 118.29124 * 179.75211 * 13 12 10 15 15 C 1.50704 * 120.34642 * 180.28887 * 14 13 12 16 16 O 1.42905 * 109.46960 * 300.24705 * 15 14 13 17 17 Si 1.86304 * 109.46949 * 180.25245 * 15 14 13 18 18 C 1.38305 * 119.30631 * 0.53542 * 14 13 12 19 19 N 1.31960 * 121.07657 * 359.44668 * 18 14 13 20 20 C 1.31666 * 121.88364 * 0.28221 * 19 18 14 21 21 C 1.53778 * 87.08572 * 25.43046 * 7 6 4 22 22 H 0.96996 * 119.99754 * 180.02562 * 1 2 3 23 23 H 0.97000 * 119.99985 * 0.02562 * 1 2 3 24 24 H 1.09002 * 113.61601 * 334.65234 * 6 4 2 25 25 H 1.08998 * 113.68541 * 203.76044 * 6 4 2 26 26 H 0.96999 * 119.99738 * 334.99676 * 9 7 6 27 27 H 1.08006 * 120.85061 * 0.02562 * 13 12 10 28 28 H 1.08994 * 109.47437 * 60.25074 * 15 14 13 29 29 H 0.96703 * 113.99653 * 300.00264 * 16 15 14 30 30 H 1.48502 * 109.99894 * 179.97438 * 17 15 14 31 31 H 1.48507 * 109.99846 * 301.31593 * 17 15 14 32 32 H 1.08002 * 119.46432 * 179.73273 * 18 14 13 33 33 H 1.07996 * 119.71422 * 179.97438 * 20 19 18 34 34 H 1.09003 * 113.61326 * 89.11530 * 21 7 6 35 35 H 1.08994 * 113.61430 * 220.02024 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0502 0.0000 4 6 2.1013 -1.3052 0.0006 5 1 1.7399 -2.0029 -0.7550 6 6 3.6296 -1.1342 0.0011 7 6 3.5487 -1.1212 1.5367 8 1 3.4009 -0.1268 1.9579 9 7 4.6341 -1.8591 2.1878 10 6 5.0028 -1.5451 3.4455 11 8 4.4351 -0.6493 4.0395 12 6 6.0977 -2.2900 4.1026 13 6 6.4906 -1.9734 5.4084 14 6 7.5173 -2.7044 5.9799 15 6 7.9731 -2.4071 7.3853 16 8 8.4281 -1.0546 7.4623 17 14 9.3651 -3.5575 7.8432 18 6 8.1242 -3.7074 5.2460 19 7 7.7327 -3.9839 4.0165 20 6 6.7573 -3.3206 3.4315 21 6 2.2497 -1.9323 1.3968 22 1 -0.4849 -0.8400 0.0004 23 1 -0.4850 0.8400 -0.0004 24 1 3.9633 -0.1887 -0.4265 25 1 4.1665 -1.9934 -0.4006 26 1 5.0873 -2.5737 1.7136 27 1 6.0019 -1.1819 5.9572 28 1 7.1414 -2.5505 8.0750 29 1 9.1689 -0.8547 6.8737 30 1 9.8239 -3.2740 9.2268 31 1 8.9140 -4.9684 7.7362 32 1 8.9287 -4.2766 5.6880 33 1 6.4656 -3.5761 2.4236 34 1 2.4082 -3.0106 1.3766 35 1 1.4695 -1.6312 2.0959 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_13287814.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:07 Heat of formation + Delta-G solvation = -46.103199 kcal Electronic energy + Delta-G solvation = -20911.447099 eV Core-core repulsion = 17490.570568 eV Total energy + Delta-G solvation = -3420.876532 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 278.110 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -42.08025 -41.47383 -40.19325 -38.37779 -37.94376 -34.96597 -34.58333 -33.76725 -32.86161 -27.57856 -27.25432 -26.75073 -25.39707 -23.85697 -22.82428 -21.75705 -20.39179 -19.21312 -18.51537 -18.08485 -17.96691 -17.79990 -17.57490 -16.94799 -16.53555 -16.16011 -16.04724 -15.65499 -15.62847 -15.08905 -14.67993 -14.41445 -14.35053 -14.19639 -13.58170 -13.47103 -13.32129 -13.07302 -12.73287 -12.15771 -11.88116 -11.71643 -11.43283 -11.10793 -11.01032 -10.70979 -10.63474 -10.59282 -10.33493 -10.11930 -5.02022 -0.59252 -0.04804 1.22452 1.53191 1.59951 1.62936 1.91157 1.99004 2.53809 2.61417 3.09610 3.36433 3.37657 3.42219 3.43578 3.65311 3.70038 3.71785 3.76172 3.88263 4.09442 4.23131 4.28930 4.45399 4.52704 4.69076 4.78405 4.82476 4.84933 4.90213 4.99672 5.06147 5.30469 5.43322 5.83574 6.34961 6.42670 6.62959 6.69206 7.02459 7.30302 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.521 3.479 3 O -0.595 6.595 4 C -0.130 4.130 5 H 0.150 0.850 6 C -0.119 4.119 7 C 0.108 3.892 8 H 0.077 0.923 9 N -0.693 5.693 10 C 0.562 3.438 11 O -0.581 6.581 12 C -0.197 4.197 13 C -0.004 4.004 14 C -0.176 4.176 15 C -0.076 4.076 16 O -0.556 6.556 17 Si 0.787 3.213 18 C 0.130 3.870 19 N -0.491 5.491 20 C 0.150 3.850 21 C -0.122 4.122 22 H 0.419 0.581 23 H 0.405 0.595 24 H 0.066 0.934 25 H 0.134 0.866 26 H 0.420 0.580 27 H 0.132 0.868 28 H 0.110 0.890 29 H 0.397 0.603 30 H -0.296 1.296 31 H -0.273 1.273 32 H 0.185 0.815 33 H 0.196 0.804 34 H 0.130 0.870 35 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.296 -7.955 -4.992 9.396 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.307 3.693 3 O -0.475 6.475 4 C -0.152 4.152 5 H 0.167 0.833 6 C -0.157 4.157 7 C 0.003 3.997 8 H 0.095 0.905 9 N -0.345 5.345 10 C 0.349 3.651 11 O -0.461 6.461 12 C -0.202 4.202 13 C -0.031 4.031 14 C -0.178 4.178 15 C -0.186 4.186 16 O -0.364 6.364 17 Si 0.691 3.309 18 C -0.025 4.025 19 N -0.199 5.199 20 C -0.008 4.008 21 C -0.161 4.161 22 H 0.251 0.749 23 H 0.236 0.764 24 H 0.085 0.915 25 H 0.152 0.848 26 H 0.259 0.741 27 H 0.150 0.850 28 H 0.128 0.872 29 H 0.247 0.753 30 H -0.224 1.224 31 H -0.199 1.199 32 H 0.202 0.798 33 H 0.213 0.787 34 H 0.148 0.852 35 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 0.629 -8.024 -4.096 9.031 hybrid contribution -1.639 1.120 0.577 2.068 sum -1.011 -6.904 -3.519 7.815 Atomic orbital electron populations 1.43766 1.06396 1.13827 1.76059 1.20733 0.83500 0.91075 0.74036 1.90761 1.69440 1.35568 1.51779 1.22227 0.96669 0.94687 1.01621 0.83266 1.23289 0.94457 1.04696 0.93253 1.22654 0.87360 0.95975 0.93669 0.90514 1.45715 1.36991 1.38053 1.13759 1.18354 0.82256 0.82251 0.82210 1.90809 1.56808 1.33050 1.65450 1.20988 1.00663 1.01616 0.96947 1.21631 0.92577 0.95838 0.93046 1.21444 0.98450 0.98749 0.99188 1.25300 1.07482 0.92142 0.93664 1.86510 1.55844 1.26569 1.67441 0.93690 0.81099 0.74525 0.81586 1.23234 0.96854 0.92836 0.89609 1.67822 1.13715 1.27298 1.11047 1.23489 0.88870 0.88258 1.00229 1.23424 0.96575 1.02094 0.93992 0.74920 0.76420 0.91520 0.84752 0.74070 0.85007 0.87214 0.75314 1.22352 1.19920 0.79839 0.78698 0.85185 0.91472 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 4.11 8.87 -173.53 -1.54 2.57 16 2 C 0.52 1.12 7.36 87.66 0.65 1.76 16 3 O -0.59 -8.02 16.59 -3.01 -0.05 -8.07 16 4 C -0.13 0.75 4.34 -11.01 -0.05 0.70 16 5 H 0.15 -1.92 8.14 -2.39 -0.02 -1.94 16 6 C -0.12 0.49 7.20 31.12 0.22 0.71 16 7 C 0.11 0.07 3.89 45.51 0.18 0.24 16 8 H 0.08 0.82 7.40 -2.39 -0.02 0.80 16 9 N -0.69 1.43 5.31 -442.91 -2.35 -0.92 16 10 C 0.56 3.24 7.78 86.78 0.68 3.91 16 11 O -0.58 -9.34 16.02 -3.92 -0.06 -9.41 16 12 C -0.20 -0.42 5.89 -19.99 -0.12 -0.53 16 13 C 0.00 -0.02 9.31 22.73 0.21 0.19 16 14 C -0.18 0.06 5.39 -19.81 -0.11 -0.05 16 15 C -0.08 0.11 2.84 71.24 0.20 0.31 16 16 O -0.56 -0.24 12.77 -148.98 -1.90 -2.15 16 17 Si 0.79 -3.75 29.82 68.60 2.05 -1.70 16 18 C 0.13 -0.29 9.84 84.69 0.83 0.54 16 19 N -0.49 0.27 10.35 -194.76 -2.01 -1.75 16 20 C 0.15 -0.44 10.71 85.04 0.91 0.48 16 21 C -0.12 0.67 7.46 31.12 0.23 0.90 16 22 H 0.42 -5.00 8.83 -92.71 -0.82 -5.82 16 23 H 0.40 -1.92 8.93 -92.71 -0.83 -2.74 16 24 H 0.07 0.15 7.43 -2.39 -0.02 0.13 16 25 H 0.13 -1.57 8.12 -2.39 -0.02 -1.59 16 26 H 0.42 -4.36 6.79 -92.71 -0.63 -4.99 16 27 H 0.13 1.01 7.74 -2.91 -0.02 0.99 16 28 H 0.11 0.01 7.96 -2.39 -0.02 -0.01 16 29 H 0.40 -3.16 8.70 -74.06 -0.64 -3.80 16 30 H -0.30 -0.95 7.11 99.48 0.71 -0.24 16 31 H -0.27 0.36 7.11 99.48 0.71 1.07 16 32 H 0.19 -1.37 4.88 -2.91 -0.01 -1.39 16 33 H 0.20 -2.18 6.42 -2.91 -0.02 -2.20 16 34 H 0.13 -1.45 8.14 -2.39 -0.02 -1.47 16 35 H 0.07 -0.17 8.10 -2.39 -0.02 -0.19 16 Total: 0.00 -31.92 303.55 -3.73 -35.65 By element: Atomic # 1 Polarization: -21.71 SS G_CDS: -1.69 Total: -23.41 kcal Atomic # 6 Polarization: 5.33 SS G_CDS: 3.84 Total: 9.17 kcal Atomic # 7 Polarization: 5.81 SS G_CDS: -5.91 Total: -0.10 kcal Atomic # 8 Polarization: -17.60 SS G_CDS: -2.02 Total: -19.62 kcal Atomic # 14 Polarization: -3.75 SS G_CDS: 2.05 Total: -1.70 kcal Total: -31.92 -3.73 -35.65 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13287814.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.449 kcal (2) G-P(sol) polarization free energy of solvation -31.924 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.373 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.730 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.654 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.103 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds