Wall clock time and date at job start Thu Mar 4 2021 13:20:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.36412 * 125.79972 * 2 1 4 4 C 1.47382 * 127.19183 * 359.97438 * 3 2 1 5 5 O 1.21610 * 120.00318 * 359.70903 * 4 3 2 6 6 N 1.34783 * 119.99647 * 179.71019 * 4 3 2 7 7 C 1.46502 * 119.99683 * 179.97438 * 6 4 3 8 8 H 1.08999 * 112.85025 * 23.80911 * 7 6 4 9 9 C 1.53779 * 113.61301 * 154.99921 * 7 6 4 10 10 C 1.53787 * 87.07963 * 89.11687 * 9 7 6 11 11 H 1.08994 * 113.61447 * 270.88515 * 10 9 7 12 12 C 1.50702 * 113.61150 * 139.98062 * 10 9 7 13 13 N 1.34782 * 119.99757 * 180.02562 * 12 10 9 14 14 O 1.21281 * 120.00409 * 0.02562 * 12 10 9 15 15 C 1.53779 * 113.61564 * 252.49989 * 7 6 4 16 16 C 1.47025 * 105.61479 * 179.73606 * 3 2 1 17 17 C 1.34179 * 105.95385 * 0.25829 * 16 3 2 18 18 C 1.50696 * 125.43688 * 180.02562 * 17 16 3 19 19 O 1.42900 * 109.47039 * 65.00063 * 18 17 16 20 20 Si 1.86301 * 109.46987 * 185.00185 * 18 17 16 21 21 O 1.33654 * 125.80152 * 180.18590 * 2 1 3 22 22 H 1.09002 * 109.47136 * 90.00384 * 1 2 3 23 23 H 1.09002 * 109.47088 * 210.00219 * 1 2 3 24 24 H 1.08993 * 109.47081 * 330.00412 * 1 2 3 25 25 H 0.96996 * 119.99920 * 0.02562 * 6 4 3 26 26 H 1.08997 * 113.61646 * 334.57319 * 9 7 6 27 27 H 1.08998 * 113.69354 * 203.67627 * 9 7 6 28 28 H 0.97001 * 119.99544 * 359.97438 * 13 12 10 29 29 H 0.96994 * 119.99893 * 180.02562 * 13 12 10 30 30 H 1.09002 * 113.61557 * 156.33711 * 15 7 6 31 31 H 1.09004 * 113.61501 * 25.43131 * 15 7 6 32 32 H 1.07993 * 127.02188 * 180.24127 * 16 3 2 33 33 H 1.08998 * 109.47328 * 304.99914 * 18 17 16 34 34 H 0.96704 * 113.99930 * 59.99922 * 19 18 17 35 35 H 1.48503 * 109.99979 * 180.02562 * 20 18 17 36 36 H 1.48507 * 109.99837 * 301.31852 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8739 2.5158 -0.0005 5 8 0.6889 2.7892 -0.0064 6 7 2.7930 3.5016 0.0055 7 6 2.3645 4.9025 0.0044 8 1 1.3597 5.0381 0.4044 9 6 3.4021 5.8645 0.6065 10 6 3.9921 5.9884 -0.8083 11 1 4.7559 5.2430 -1.0297 12 6 4.4192 7.3893 -1.1637 13 7 4.9538 7.6441 -2.3744 14 8 4.2818 8.2874 -0.3603 15 6 2.5969 5.6168 -1.3375 16 6 3.6849 0.5991 0.0065 17 6 3.5860 -0.7390 0.0039 18 6 4.7459 -1.7010 0.0092 19 8 5.4690 -1.5686 1.2346 20 14 4.1079 -3.4441 -0.1503 21 8 2.2889 -1.0840 -0.0035 22 1 -0.3633 -0.0001 -1.0277 23 1 -0.3633 -0.8900 0.5139 24 1 -0.3633 0.8900 0.5137 25 1 3.7381 3.2834 0.0097 26 1 4.0753 5.3897 1.3202 27 1 2.9723 6.7927 0.9831 28 1 5.0640 6.9256 -3.0168 29 1 5.2290 8.5456 -2.6030 30 1 1.9455 6.4768 -1.4929 31 1 2.6200 4.9418 -2.1932 32 1 4.5927 1.1840 0.0120 33 1 5.4067 -1.4780 -0.8285 34 1 4.9419 -1.7528 2.0241 35 1 5.2422 -4.4025 -0.1458 36 1 3.1807 -3.7498 0.9688 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_13308374.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:09 Heat of formation + Delta-G solvation = -69.429993 kcal Electronic energy + Delta-G solvation = -21760.850319 eV Core-core repulsion = 18213.932121 eV Total energy + Delta-G solvation = -3546.918198 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.114 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -43.75986 -41.65023 -40.28685 -38.51546 -38.12525 -34.75319 -34.52611 -33.77714 -33.03172 -29.45266 -27.56155 -26.77365 -25.76226 -24.31859 -22.62092 -21.98616 -20.83583 -20.16692 -19.05056 -18.51561 -17.95960 -17.73882 -17.66136 -16.96452 -16.72871 -16.19542 -16.08762 -15.77115 -15.72935 -15.32809 -14.94919 -14.56509 -14.22512 -14.12754 -13.89251 -13.81938 -13.62233 -13.35186 -12.95617 -12.88930 -12.81714 -12.17149 -11.76538 -11.63876 -11.19469 -10.94213 -10.93614 -10.72094 -10.67586 -10.15153 -9.57776 -4.93362 0.23271 0.84045 1.18591 1.43322 1.57266 1.71668 1.92893 2.07067 2.22793 2.62139 3.18879 3.35441 3.39852 3.43096 3.67810 3.76487 3.79677 3.91294 4.12786 4.25461 4.40277 4.48379 4.55446 4.61460 4.66064 4.70448 4.74528 4.82560 4.87048 4.92470 5.05361 5.17141 5.23399 5.51836 5.87127 5.90395 6.34324 6.45127 6.47416 7.14964 7.33005 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.086 3.914 3 C -0.268 4.268 4 C 0.593 3.407 5 O -0.572 6.572 6 N -0.692 5.692 7 C 0.121 3.879 8 H 0.090 0.910 9 C -0.122 4.122 10 C -0.129 4.129 11 H 0.145 0.855 12 C 0.521 3.479 13 N -0.838 5.838 14 O -0.596 6.596 15 C -0.124 4.124 16 C -0.143 4.143 17 C -0.059 4.059 18 C -0.030 4.030 19 O -0.534 6.534 20 Si 0.767 3.233 21 O -0.174 6.174 22 H 0.103 0.897 23 H 0.095 0.905 24 H 0.095 0.905 25 H 0.415 0.585 26 H 0.090 0.910 27 H 0.091 0.909 28 H 0.418 0.582 29 H 0.404 0.596 30 H 0.089 0.911 31 H 0.093 0.907 32 H 0.181 0.819 33 H 0.161 0.839 34 H 0.390 0.610 35 H -0.284 1.284 36 H -0.297 1.297 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.954 -3.798 -5.419 7.247 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C 0.033 3.967 3 C -0.272 4.272 4 C 0.382 3.618 5 O -0.453 6.453 6 N -0.343 5.343 7 C 0.015 3.985 8 H 0.108 0.892 9 C -0.161 4.161 10 C -0.150 4.150 11 H 0.163 0.837 12 C 0.307 3.693 13 N -0.401 5.401 14 O -0.477 6.477 15 C -0.164 4.164 16 C -0.162 4.162 17 C -0.107 4.107 18 C -0.140 4.140 19 O -0.343 6.343 20 Si 0.671 3.329 21 O -0.071 6.071 22 H 0.121 0.879 23 H 0.113 0.887 24 H 0.114 0.886 25 H 0.252 0.748 26 H 0.108 0.892 27 H 0.110 0.890 28 H 0.249 0.751 29 H 0.235 0.765 30 H 0.108 0.892 31 H 0.112 0.888 32 H 0.199 0.801 33 H 0.178 0.822 34 H 0.240 0.760 35 H -0.210 1.210 36 H -0.223 1.223 Dipole moment (debyes) X Y Z Total from point charges 2.329 -4.099 -4.852 6.765 hybrid contribution 0.704 0.725 0.886 1.344 sum 3.033 -3.374 -3.965 6.025 Atomic orbital electron populations 1.20710 0.82744 1.05303 1.05422 1.23212 0.94730 0.83055 0.95712 1.21160 0.94308 0.93243 1.18527 1.17353 0.85149 0.84359 0.74923 1.90770 1.18025 1.84473 1.52043 1.45293 1.10061 1.04416 1.74525 1.21745 0.99367 0.79999 0.97389 0.89152 1.23175 0.97648 0.99472 0.95776 1.22888 0.99387 0.93909 0.98786 0.83691 1.20889 0.75594 0.91174 0.81685 1.43825 1.64392 1.15523 1.16379 1.90748 1.56934 1.48873 1.51102 1.23285 0.94170 1.00712 0.98184 1.22817 0.96381 0.93533 1.03491 1.22829 0.82745 0.96028 1.09119 1.24477 0.91334 1.07158 0.91005 1.86641 1.40178 1.91498 1.15946 0.93593 0.78071 0.72308 0.88897 1.83690 1.16928 1.35056 1.71437 0.87895 0.88661 0.88609 0.74770 0.89157 0.89023 0.75054 0.76487 0.89230 0.88817 0.80150 0.82206 0.76025 1.21036 1.22349 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.06 9.88 71.24 0.70 0.76 16 2 C 0.09 0.18 7.37 25.26 0.19 0.36 16 3 C -0.27 -0.51 6.31 -18.99 -0.12 -0.62 16 4 C 0.59 2.38 7.81 86.65 0.68 3.06 16 5 O -0.57 -6.20 14.45 -4.06 -0.06 -6.26 16 6 N -0.69 1.59 5.26 -443.34 -2.33 -0.74 16 7 C 0.12 -0.12 4.32 45.52 0.20 0.07 16 8 H 0.09 0.34 7.46 -2.39 -0.02 0.32 16 9 C -0.12 0.20 7.15 31.12 0.22 0.42 16 10 C -0.13 0.63 4.03 -11.01 -0.04 0.59 16 11 H 0.15 -1.63 8.14 -2.39 -0.02 -1.65 16 12 C 0.52 0.56 7.63 87.66 0.67 1.23 16 13 N -0.84 5.05 8.87 -173.52 -1.54 3.51 16 14 O -0.60 -7.11 16.74 -3.03 -0.05 -7.16 16 15 C -0.12 0.48 7.43 31.12 0.23 0.71 16 16 C -0.14 0.36 10.48 23.65 0.25 0.61 16 17 C -0.06 0.11 6.18 24.76 0.15 0.27 16 18 C -0.03 0.15 2.97 71.23 0.21 0.36 16 19 O -0.53 1.20 12.88 -148.98 -1.92 -0.72 16 20 Si 0.77 -2.66 32.09 68.60 2.20 -0.45 16 21 O -0.17 -0.15 8.90 4.44 0.04 -0.11 16 22 H 0.10 -0.28 8.14 -2.39 -0.02 -0.30 16 23 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 24 H 0.10 0.27 6.49 -2.39 -0.02 0.26 16 25 H 0.41 -3.30 7.87 -92.71 -0.73 -4.03 16 26 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 27 H 0.09 0.28 7.43 -2.39 -0.02 0.26 16 28 H 0.42 -5.27 8.83 -92.71 -0.82 -6.09 16 29 H 0.40 -2.46 8.93 -92.71 -0.83 -3.28 16 30 H 0.09 -0.16 8.09 -2.39 -0.02 -0.18 16 31 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 32 H 0.18 -1.45 7.74 -2.91 -0.02 -1.47 16 33 H 0.16 -1.48 7.96 -2.39 -0.02 -1.50 16 34 H 0.39 -2.59 8.70 -74.05 -0.64 -3.23 16 35 H -0.28 -0.67 7.11 99.48 0.71 0.03 16 36 H -0.30 -0.99 7.11 99.48 0.71 -0.28 16 Total: 0.00 -24.43 315.20 -2.14 -26.57 By element: Atomic # 1 Polarization: -20.64 SS G_CDS: -1.82 Total: -22.45 kcal Atomic # 6 Polarization: 4.49 SS G_CDS: 3.34 Total: 7.82 kcal Atomic # 7 Polarization: 6.64 SS G_CDS: -3.87 Total: 2.77 kcal Atomic # 8 Polarization: -12.26 SS G_CDS: -1.99 Total: -14.25 kcal Atomic # 14 Polarization: -2.66 SS G_CDS: 2.20 Total: -0.45 kcal Total: -24.43 -2.14 -26.57 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13308374.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.859 kcal (2) G-P(sol) polarization free energy of solvation -24.431 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.291 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.139 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.571 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.430 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds