Wall clock time and date at job start Thu Mar 4 2021 13:20:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34777 * 1 3 3 O 1.21279 * 120.00012 * 2 1 4 4 C 1.50698 * 120.00073 * 180.02562 * 2 1 3 5 5 H 1.09004 * 112.84567 * 311.19583 * 4 2 1 6 6 C 1.53780 * 113.69220 * 82.46500 * 4 2 1 7 7 C 1.53778 * 87.07931 * 139.99378 * 6 4 2 8 8 H 1.09004 * 113.68736 * 220.00548 * 7 6 4 9 9 N 1.46499 * 113.61456 * 89.12162 * 7 6 4 10 10 C 1.34773 * 120.00478 * 107.49884 * 9 7 6 11 11 O 1.21595 * 119.99894 * 359.97438 * 10 9 7 12 12 C 1.47555 * 120.00144 * 179.97438 * 10 9 7 13 13 C 1.39840 * 120.00255 * 179.97438 * 12 10 9 14 14 C 1.36552 * 119.99857 * 180.02562 * 13 12 10 15 15 C 1.39818 * 120.00436 * 359.97438 * 14 13 12 16 16 C 1.47564 * 120.00122 * 179.97438 * 15 14 13 17 17 C 1.34986 * 125.27555 * 179.97438 * 16 15 14 18 18 C 1.37804 * 114.69861 * 180.02562 * 17 16 15 19 19 C 1.33744 * 115.07932 * 0.02562 * 18 17 16 20 20 C 1.50704 * 125.11383 * 179.97438 * 19 18 17 21 21 O 1.42901 * 109.47296 * 300.00116 * 20 19 18 22 22 Si 1.86299 * 109.46714 * 180.02562 * 20 19 18 23 23 S 1.75853 * 109.76495 * 0.02562 * 19 18 17 24 24 C 1.39824 * 120.00136 * 0.27740 * 15 14 13 25 25 C 1.36564 * 120.00107 * 359.48038 * 24 15 14 26 26 C 1.53774 * 87.08339 * 334.56607 * 7 6 4 27 27 H 0.96998 * 120.00423 * 180.02562 * 1 2 3 28 28 H 0.97004 * 119.99801 * 0.02562 * 1 2 3 29 29 H 1.08994 * 113.61268 * 25.44058 * 6 4 2 30 30 H 1.09004 * 113.61194 * 254.54245 * 6 4 2 31 31 H 0.97000 * 119.99291 * 287.49291 * 9 7 6 32 32 H 1.07997 * 119.99593 * 0.02562 * 13 12 10 33 33 H 1.08004 * 119.99780 * 180.02562 * 14 13 12 34 34 H 1.07998 * 122.65113 * 0.06194 * 17 16 15 35 35 H 1.07997 * 122.45661 * 180.27353 * 18 17 16 36 36 H 1.08999 * 109.47043 * 60.00156 * 20 19 18 37 37 H 0.96700 * 113.99904 * 300.00451 * 21 20 19 38 38 H 1.48497 * 110.00017 * 58.68413 * 22 20 19 39 39 H 1.48498 * 109.99912 * 180.02562 * 22 20 19 40 40 H 1.08000 * 119.99794 * 179.72428 * 24 15 14 41 41 H 1.07992 * 120.00235 * 180.25951 * 25 24 15 42 42 H 1.09004 * 113.61615 * 139.98388 * 26 7 6 43 43 H 1.08997 * 113.61729 * 270.88875 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1013 -1.3051 -0.0006 5 1 1.7399 -2.0027 0.7550 6 6 2.2503 -1.9319 -1.3969 7 6 3.6827 -2.3126 -0.9868 8 1 4.4154 -2.1827 -1.7833 9 7 3.7781 -3.6206 -0.3339 10 6 4.3240 -4.6634 -0.9904 11 8 4.7369 -4.5187 -2.1249 12 6 4.4206 -5.9806 -0.3325 13 6 4.9865 -7.0627 -1.0138 14 6 5.0754 -8.2818 -0.4051 15 6 4.6011 -8.4480 0.8996 16 6 4.6967 -9.7656 1.5572 17 6 4.2748 -10.0447 2.8087 18 6 4.4715 -11.3498 3.2050 19 6 5.0492 -12.1385 2.2923 20 6 5.3691 -13.5983 2.4861 21 8 6.2662 -13.7472 3.5884 22 14 6.1669 -14.2694 0.9421 23 16 5.3804 -11.2152 0.8327 24 6 4.0305 -7.3674 1.5791 25 6 3.9460 -6.1469 0.9723 26 6 3.6295 -1.1341 -0.0005 27 1 -0.4851 -0.8400 0.0004 28 1 -0.4850 0.8401 -0.0004 29 1 2.2069 -1.2056 -2.2084 30 1 1.6002 -2.7913 -1.5614 31 1 3.4485 -3.7360 0.5711 32 1 5.3532 -6.9342 -2.0215 33 1 5.5129 -9.1174 -0.9312 34 1 3.8186 -9.3039 3.4486 35 1 4.1770 -11.7102 4.1795 36 1 4.4500 -14.1479 2.6889 37 1 7.1072 -13.2831 3.4766 38 1 7.4045 -13.5074 0.6375 39 1 6.4868 -15.7085 1.1200 40 1 3.6601 -7.4970 2.5853 41 1 3.5091 -5.3112 1.4986 42 1 4.0930 -1.3492 0.9624 43 1 3.9632 -0.1896 -0.4303 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_13308390.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:13 Heat of formation + Delta-G solvation = -17.281066 kcal Electronic energy + Delta-G solvation = -27445.506848 eV Core-core repulsion = 23356.478495 eV Total energy + Delta-G solvation = -4089.028353 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.102 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.86841 -40.97600 -39.91391 -39.17451 -38.39487 -37.50854 -34.74869 -34.51640 -33.36247 -32.28639 -30.55163 -27.88344 -26.90397 -26.87768 -24.82280 -24.04633 -23.53268 -22.33013 -21.84192 -20.39523 -20.35093 -19.30495 -18.84978 -18.37557 -17.80940 -17.74029 -17.09793 -16.73263 -16.42886 -16.34550 -16.24840 -16.10566 -15.83851 -15.62991 -15.31762 -15.08709 -14.78701 -14.55268 -14.45220 -14.24844 -13.84991 -13.73450 -13.67568 -13.49341 -13.25465 -13.18871 -12.91753 -12.59569 -12.37938 -12.18167 -11.87375 -11.72408 -11.57613 -11.02945 -10.91273 -10.88411 -10.72105 -10.68948 -10.27513 -10.18200 -9.61410 -9.09475 -5.14622 -0.94748 0.19507 0.26362 0.32590 0.69454 1.13997 1.49266 1.51269 1.57828 1.83114 1.94140 1.94419 2.49523 2.77648 3.19335 3.24625 3.31809 3.35144 3.54920 3.57492 3.63144 3.68805 3.71925 3.75524 4.05251 4.09196 4.21230 4.29836 4.41265 4.43912 4.45985 4.52465 4.59976 4.70670 4.72376 4.79044 4.81371 4.91652 4.96903 5.02738 5.15477 5.20539 5.23143 5.39268 5.43935 5.65120 5.74309 6.22771 6.28108 6.35124 7.11093 7.23482 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.855 5.855 2 C 0.526 3.474 3 O -0.540 6.540 4 C -0.143 4.143 5 H 0.113 0.887 6 C -0.133 4.133 7 C 0.120 3.880 8 H 0.112 0.888 9 N -0.710 5.710 10 C 0.563 3.437 11 O -0.529 6.529 12 C -0.137 4.137 13 C -0.048 4.048 14 C -0.120 4.120 15 C 0.014 3.986 16 C -0.149 4.149 17 C -0.119 4.119 18 C -0.104 4.104 19 C -0.217 4.217 20 C -0.033 4.033 21 O -0.523 6.523 22 Si 0.648 3.352 23 S 0.135 5.865 24 C -0.110 4.110 25 C -0.078 4.078 26 C -0.122 4.122 27 H 0.402 0.598 28 H 0.402 0.598 29 H 0.098 0.902 30 H 0.082 0.918 31 H 0.400 0.600 32 H 0.142 0.858 33 H 0.131 0.869 34 H 0.145 0.855 35 H 0.146 0.854 36 H 0.128 0.872 37 H 0.378 0.622 38 H -0.240 1.240 39 H -0.234 1.234 40 H 0.134 0.866 41 H 0.130 0.870 42 H 0.081 0.919 43 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.696 -2.701 2.050 5.792 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.418 5.418 2 C 0.311 3.689 3 O -0.416 6.416 4 C -0.164 4.164 5 H 0.131 0.869 6 C -0.172 4.172 7 C 0.015 3.985 8 H 0.130 0.870 9 N -0.362 5.362 10 C 0.351 3.649 11 O -0.406 6.406 12 C -0.140 4.140 13 C -0.067 4.067 14 C -0.139 4.139 15 C 0.012 3.988 16 C -0.266 4.266 17 C -0.149 4.149 18 C -0.135 4.135 19 C -0.334 4.334 20 C -0.145 4.145 21 O -0.330 6.330 22 Si 0.547 3.453 23 S 0.402 5.598 24 C -0.130 4.130 25 C -0.097 4.097 26 C -0.160 4.160 27 H 0.230 0.770 28 H 0.233 0.767 29 H 0.117 0.883 30 H 0.100 0.900 31 H 0.236 0.764 32 H 0.160 0.840 33 H 0.149 0.851 34 H 0.162 0.838 35 H 0.163 0.837 36 H 0.146 0.854 37 H 0.226 0.774 38 H -0.164 1.164 39 H -0.157 1.157 40 H 0.152 0.848 41 H 0.147 0.853 42 H 0.099 0.901 43 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -2.925 -3.143 -0.305 4.304 hybrid contribution -0.784 0.646 2.796 2.975 sum -3.709 -2.496 2.492 5.118 Atomic orbital electron populations 1.43912 1.07317 1.12648 1.77897 1.20446 0.82585 0.91108 0.74784 1.90771 1.68225 1.33480 1.49120 1.22869 0.97420 0.95485 1.00623 0.86905 1.23364 0.97713 1.00977 0.95143 1.21844 0.97982 0.81925 0.96790 0.86959 1.45586 1.62809 1.09348 1.18482 1.18214 0.77115 0.83919 0.85675 1.90822 1.47588 1.84230 1.17932 1.19981 1.04609 0.94077 0.95372 1.20952 0.94546 0.90893 1.00265 1.20981 1.00830 0.98033 0.94028 1.18301 0.96791 0.90382 0.93313 1.23093 1.08369 0.96727 0.98417 1.20391 1.02188 0.97258 0.95085 1.20006 0.99931 0.92705 1.00832 1.25046 1.09220 1.00919 0.98241 1.24379 0.98517 0.92095 0.99533 1.86629 1.30196 1.75515 1.40652 0.95228 0.85836 0.82967 0.81282 1.84180 1.59208 1.00290 1.16099 1.20869 0.99888 0.91763 1.00465 1.20946 0.97596 0.97564 0.93574 1.23254 0.92960 0.99268 1.00554 0.76982 0.76717 0.88339 0.89968 0.76379 0.84004 0.85107 0.83766 0.83654 0.85421 0.77387 1.16373 1.15704 0.84804 0.85265 0.90070 0.86964 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.85 2.47 8.87 31.22 0.28 2.75 16 2 C 0.53 0.12 7.63 -10.99 -0.08 0.04 16 3 O -0.54 -2.71 16.74 5.56 0.09 -2.62 16 4 C -0.14 0.35 4.02 -90.96 -0.37 -0.01 16 5 H 0.11 -0.55 8.14 -51.93 -0.42 -0.97 16 6 C -0.13 0.27 7.43 -25.92 -0.19 0.08 16 7 C 0.12 -0.13 4.32 -67.12 -0.29 -0.42 16 8 H 0.11 0.09 7.46 -51.93 -0.39 -0.29 16 9 N -0.71 1.14 5.21 -54.05 -0.28 0.86 16 10 C 0.56 0.79 7.76 -12.46 -0.10 0.70 16 11 O -0.53 -2.80 15.93 5.28 0.08 -2.72 16 12 C -0.14 -0.02 5.88 -104.90 -0.62 -0.63 16 13 C -0.05 -0.03 9.53 -39.59 -0.38 -0.40 16 14 C -0.12 0.01 9.54 -39.60 -0.38 -0.36 16 15 C 0.01 0.00 5.88 -104.91 -0.62 -0.62 16 16 C -0.15 0.03 6.37 -36.94 -0.24 -0.20 16 17 C -0.12 0.10 9.64 -40.90 -0.39 -0.29 16 18 C -0.10 0.06 10.00 -41.32 -0.41 -0.36 16 19 C -0.22 0.12 5.73 -35.88 -0.21 -0.09 16 20 C -0.03 0.03 2.96 36.01 0.11 0.14 16 21 O -0.52 -0.19 12.86 -35.23 -0.45 -0.64 16 22 Si 0.65 -0.79 30.96 -169.99 -5.26 -6.05 16 23 S 0.13 -0.08 19.46 -107.50 -2.09 -2.17 16 24 C -0.11 0.19 9.48 -39.59 -0.38 -0.18 16 25 C -0.08 0.17 9.48 -39.59 -0.38 -0.21 16 26 C -0.12 0.18 7.15 -25.92 -0.19 -0.01 16 27 H 0.40 -2.30 8.83 -40.82 -0.36 -2.66 16 28 H 0.40 -1.23 8.93 -40.82 -0.36 -1.60 16 29 H 0.10 -0.14 8.10 -51.93 -0.42 -0.56 16 30 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 31 H 0.40 -1.75 6.71 -40.82 -0.27 -2.02 16 32 H 0.14 0.10 7.64 -52.49 -0.40 -0.31 16 33 H 0.13 -0.16 7.26 -52.48 -0.38 -0.54 16 34 H 0.14 -0.41 6.88 -52.49 -0.36 -0.77 16 35 H 0.15 -0.19 8.06 -52.49 -0.42 -0.62 16 36 H 0.13 -0.24 7.96 -51.93 -0.41 -0.66 16 37 H 0.38 -0.88 8.70 45.56 0.40 -0.48 16 38 H -0.24 -0.15 7.11 56.52 0.40 0.25 16 39 H -0.23 -0.35 7.11 56.52 0.40 0.05 16 40 H 0.13 -0.50 6.74 -52.49 -0.35 -0.86 16 41 H 0.13 -0.67 6.38 -52.49 -0.34 -1.00 16 42 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 43 H 0.11 0.03 7.43 -51.93 -0.39 -0.36 16 LS Contribution 378.55 15.07 5.70 5.70 Total: 0.00 -10.41 378.55 -11.95 -22.36 By element: Atomic # 1 Polarization: -9.71 SS G_CDS: -4.93 Total: -14.64 kcal Atomic # 6 Polarization: 2.26 SS G_CDS: -5.10 Total: -2.83 kcal Atomic # 7 Polarization: 3.61 SS G_CDS: 0.00 Total: 3.61 kcal Atomic # 8 Polarization: -5.70 SS G_CDS: -0.28 Total: -5.98 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.26 Total: -6.05 kcal Atomic # 16 Polarization: -0.08 SS G_CDS: -2.09 Total: -2.17 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -10.41 -11.95 -22.36 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13308390.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.084 kcal (2) G-P(sol) polarization free energy of solvation -10.410 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.326 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.955 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.365 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.281 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds