Wall clock time and date at job start Thu Mar 4 2021 13:20:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34773 * 1 3 3 O 1.21281 * 120.00136 * 2 1 4 4 C 1.50707 * 119.99918 * 179.97438 * 2 1 3 5 5 H 1.09003 * 112.84661 * 311.19617 * 4 2 1 6 6 C 1.53775 * 113.68964 * 82.46423 * 4 2 1 7 7 C 1.53786 * 87.07905 * 139.99282 * 6 4 2 8 8 H 1.09006 * 113.69066 * 220.00927 * 7 6 4 9 9 N 1.46497 * 113.61590 * 89.11476 * 7 6 4 10 10 C 1.34783 * 120.00085 * 107.50358 * 9 7 6 11 11 O 1.21587 * 119.99811 * 0.02562 * 10 9 7 12 12 C 1.47539 * 120.00096 * 179.97438 * 10 9 7 13 13 C 1.39661 * 120.18752 * 359.97438 * 12 10 9 14 14 C 1.37837 * 119.90531 * 180.02562 * 13 12 10 15 15 C 1.38507 * 120.29696 * 359.71590 * 14 13 12 16 16 C 1.50696 * 119.80547 * 180.27943 * 15 14 13 17 17 O 1.42906 * 109.47293 * 245.27758 * 16 15 14 18 18 Si 1.86298 * 109.47123 * 5.27579 * 16 15 14 19 19 C 1.38099 * 120.39039 * 0.56280 * 15 14 13 20 20 C 1.38661 * 120.08316 * 359.43946 * 19 15 14 21 21 O 1.35658 * 120.14969 * 180.30092 * 20 19 15 22 22 C 1.53778 * 87.08169 * 334.56721 * 7 6 4 23 23 H 0.97011 * 120.00128 * 180.02562 * 1 2 3 24 24 H 0.96994 * 120.00201 * 0.02562 * 1 2 3 25 25 H 1.08998 * 113.61901 * 25.44645 * 6 4 2 26 26 H 1.08998 * 113.61636 * 254.53484 * 6 4 2 27 27 H 0.97002 * 119.99918 * 287.50342 * 9 7 6 28 28 H 1.07997 * 120.05180 * 359.97438 * 13 12 10 29 29 H 1.07999 * 119.85163 * 179.97438 * 14 13 12 30 30 H 1.08999 * 109.47335 * 125.27785 * 16 15 14 31 31 H 0.96698 * 113.99770 * 59.99604 * 17 16 15 32 32 H 1.48503 * 109.99706 * 58.68487 * 18 16 15 33 33 H 1.48501 * 110.00210 * 180.02562 * 18 16 15 34 34 H 1.08002 * 119.96143 * 179.72386 * 19 15 14 35 35 H 0.96702 * 113.99905 * 90.00293 * 21 20 19 36 36 H 1.08999 * 113.61843 * 139.98314 * 22 7 6 37 37 H 1.09007 * 113.61298 * 270.88664 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3052 0.0006 5 1 1.7399 -2.0022 0.7568 6 6 2.2502 -1.9332 -1.3951 7 6 3.6827 -2.3136 -0.9847 8 1 4.4154 -2.1844 -1.7813 9 7 3.7781 -3.6209 -0.3305 10 6 4.3241 -4.6643 -0.9862 11 8 4.7377 -4.5205 -2.1204 12 6 4.4207 -5.9808 -0.3271 13 6 3.9482 -6.1501 0.9762 14 6 4.0419 -7.3824 1.5865 15 6 4.5976 -8.4563 0.9109 16 6 4.6888 -9.8002 1.5866 17 8 6.0623 -10.1454 1.7771 18 14 3.8327 -9.7237 3.2395 19 6 5.0738 -8.3013 -0.3760 20 6 4.9876 -7.0687 -1.0053 21 8 5.4494 -6.9165 -2.2717 22 6 3.6295 -1.1342 0.0006 23 1 -0.4851 -0.8401 0.0004 24 1 -0.4850 0.8400 -0.0004 25 1 2.2069 -1.2076 -2.2074 26 1 1.6002 -2.7927 -1.5589 27 1 3.4484 -3.7356 0.5745 28 1 3.5108 -5.3164 1.5054 29 1 3.6767 -7.5122 2.5946 30 1 4.2079 -10.5538 0.9629 31 1 6.5535 -9.5172 2.3240 32 1 2.4112 -9.3346 3.0576 33 1 3.9161 -11.0429 3.9162 34 1 5.5098 -9.1423 -0.8948 35 1 4.7876 -7.0895 -2.9552 36 1 4.0929 -1.3484 0.9636 37 1 3.9632 -0.1900 -0.4301 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_13422076.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:15 Heat of formation + Delta-G solvation = -97.237555 kcal Electronic energy + Delta-G solvation = -22992.925486 eV Core-core repulsion = 19316.575321 eV Total energy + Delta-G solvation = -3676.350165 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.114 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.91697 -41.17602 -39.92473 -38.66206 -38.17582 -37.12275 -34.70538 -34.38946 -32.48513 -31.08838 -28.01271 -26.83985 -26.75590 -23.88141 -23.71478 -22.24214 -21.75876 -20.32611 -19.40654 -18.89140 -18.29982 -18.15805 -17.73643 -17.27906 -16.58110 -16.41676 -16.27063 -16.19310 -15.84439 -15.76460 -15.36882 -15.17169 -14.84557 -14.56130 -14.29121 -13.83282 -13.65892 -13.38489 -13.19443 -12.92733 -12.83743 -12.28757 -12.18269 -11.77098 -11.67979 -11.58411 -10.98347 -10.91120 -10.65885 -10.48002 -10.23247 -10.00210 -9.75376 -4.95817 -0.40250 0.16723 1.30801 1.58939 1.66190 1.72739 1.97382 2.02471 2.57645 2.64143 3.14240 3.37143 3.44294 3.45203 3.57442 3.69602 3.75211 3.81704 3.92790 4.10769 4.27684 4.29745 4.40298 4.56316 4.61132 4.71917 4.76307 4.78932 4.88120 4.94077 5.04591 5.06783 5.17080 5.26668 5.51776 5.62018 5.88601 6.46690 6.48268 6.71649 6.74989 7.17153 7.35021 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.839 5.839 2 C 0.520 3.480 3 O -0.597 6.597 4 C -0.127 4.127 5 H 0.151 0.849 6 C -0.126 4.126 7 C 0.119 3.881 8 H 0.084 0.916 9 N -0.692 5.692 10 C 0.559 3.441 11 O -0.563 6.563 12 C -0.179 4.179 13 C -0.050 4.050 14 C -0.129 4.129 15 C -0.073 4.073 16 C -0.087 4.087 17 O -0.557 6.557 18 Si 0.789 3.211 19 C -0.143 4.143 20 C 0.151 3.849 21 O -0.500 6.500 22 C -0.121 4.121 23 H 0.418 0.582 24 H 0.404 0.596 25 H 0.085 0.915 26 H 0.094 0.906 27 H 0.417 0.583 28 H 0.174 0.826 29 H 0.167 0.833 30 H 0.108 0.892 31 H 0.397 0.603 32 H -0.272 1.272 33 H -0.306 1.306 34 H 0.130 0.870 35 H 0.407 0.593 36 H 0.096 0.904 37 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.387 -1.865 6.873 9.566 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.402 5.402 2 C 0.306 3.694 3 O -0.477 6.477 4 C -0.148 4.148 5 H 0.169 0.831 6 C -0.165 4.165 7 C 0.013 3.987 8 H 0.102 0.898 9 N -0.345 5.345 10 C 0.348 3.652 11 O -0.442 6.442 12 C -0.182 4.182 13 C -0.068 4.068 14 C -0.146 4.146 15 C -0.074 4.074 16 C -0.196 4.196 17 O -0.365 6.365 18 Si 0.694 3.306 19 C -0.161 4.161 20 C 0.105 3.895 21 O -0.313 6.313 22 C -0.160 4.160 23 H 0.250 0.750 24 H 0.234 0.766 25 H 0.104 0.896 26 H 0.113 0.887 27 H 0.256 0.744 28 H 0.191 0.809 29 H 0.184 0.816 30 H 0.126 0.874 31 H 0.247 0.753 32 H -0.199 1.199 33 H -0.234 1.234 34 H 0.148 0.852 35 H 0.266 0.734 36 H 0.115 0.885 37 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -5.854 -1.858 6.445 8.903 hybrid contribution -0.810 -0.361 -1.069 1.389 sum -6.664 -2.219 5.376 8.845 Atomic orbital electron populations 1.43836 1.06543 1.13728 1.76062 1.20928 0.83347 0.91253 0.73904 1.90753 1.69464 1.35542 1.51967 1.22904 0.96149 0.94635 1.01093 0.83105 1.23284 0.96977 1.01008 0.95242 1.21729 0.98028 0.82376 0.96526 0.89793 1.45375 1.61922 1.08238 1.18942 1.18324 0.76965 0.84564 0.85393 1.90826 1.48812 1.84721 1.19875 1.20403 1.06609 0.93512 0.97704 1.21537 0.94985 0.98808 0.91513 1.21253 1.00564 0.91801 1.01015 1.20578 0.96404 0.96674 0.93742 1.25466 0.89423 0.94281 1.10425 1.86506 1.21067 1.53337 1.75593 0.93633 0.78478 0.82357 0.76113 1.21335 1.01919 0.96524 0.96344 1.18769 0.92672 0.91639 0.86414 1.84726 1.40797 1.92112 1.13618 1.23175 0.94154 0.97799 1.00849 0.75043 0.76551 0.89606 0.88748 0.74364 0.80881 0.81601 0.87446 0.75303 1.19865 1.23435 0.85160 0.73372 0.88541 0.89328 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 6.02 8.87 -173.53 -1.54 4.48 16 2 C 0.52 -0.11 7.63 87.66 0.67 0.56 16 3 O -0.60 -6.54 16.74 -3.03 -0.05 -6.59 16 4 C -0.13 0.86 4.02 -11.01 -0.04 0.81 16 5 H 0.15 -2.15 8.14 -2.39 -0.02 -2.17 16 6 C -0.13 0.62 7.43 31.12 0.23 0.85 16 7 C 0.12 -0.24 4.32 45.52 0.20 -0.05 16 8 H 0.08 0.35 7.46 -2.38 -0.02 0.33 16 9 N -0.69 3.22 5.21 -443.18 -2.31 0.91 16 10 C 0.56 1.78 7.76 86.70 0.67 2.46 16 11 O -0.56 -7.17 14.76 16.92 0.25 -6.92 16 12 C -0.18 0.01 5.89 -20.01 -0.12 -0.11 16 13 C -0.05 0.41 9.54 22.52 0.21 0.62 16 14 C -0.13 1.08 8.64 22.24 0.19 1.28 16 15 C -0.07 0.27 5.35 -19.83 -0.11 0.16 16 16 C -0.09 0.34 2.79 71.23 0.20 0.54 16 17 O -0.56 0.94 12.83 -148.98 -1.91 -0.97 16 18 Si 0.79 -5.59 29.78 68.60 2.04 -3.54 16 19 C -0.14 -0.15 9.60 22.34 0.21 0.07 16 20 C 0.15 0.55 6.72 22.84 0.15 0.70 16 21 O -0.50 -3.58 11.58 -68.82 -0.80 -4.38 16 22 C -0.12 0.40 7.15 31.12 0.22 0.62 16 23 H 0.42 -5.82 8.83 -92.70 -0.82 -6.63 16 24 H 0.40 -2.82 8.93 -92.71 -0.83 -3.64 16 25 H 0.09 -0.18 8.10 -2.39 -0.02 -0.20 16 26 H 0.09 -0.68 8.14 -2.39 -0.02 -0.70 16 27 H 0.42 -5.19 6.73 -92.71 -0.62 -5.82 16 28 H 0.17 -2.89 6.40 -2.91 -0.02 -2.91 16 29 H 0.17 -2.42 4.88 -2.91 -0.01 -2.44 16 30 H 0.11 -0.26 7.96 -2.39 -0.02 -0.28 16 31 H 0.40 -3.95 8.70 -74.06 -0.64 -4.59 16 32 H -0.27 1.10 7.11 99.48 0.71 1.81 16 33 H -0.31 -0.60 7.11 99.48 0.71 0.10 16 34 H 0.13 0.27 8.06 -2.91 -0.02 0.24 16 35 H 0.41 0.08 9.06 -74.06 -0.67 -0.59 16 36 H 0.10 -0.61 8.14 -2.39 -0.02 -0.63 16 37 H 0.09 0.19 7.44 -2.38 -0.02 0.17 16 Total: 0.00 -32.46 317.81 -3.98 -36.44 By element: Atomic # 1 Polarization: -25.59 SS G_CDS: -2.36 Total: -27.95 kcal Atomic # 6 Polarization: 5.82 SS G_CDS: 2.70 Total: 8.52 kcal Atomic # 7 Polarization: 9.23 SS G_CDS: -3.85 Total: 5.38 kcal Atomic # 8 Polarization: -16.34 SS G_CDS: -2.51 Total: -18.85 kcal Atomic # 14 Polarization: -5.59 SS G_CDS: 2.04 Total: -3.54 kcal Total: -32.46 -3.98 -36.44 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13422076.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.798 kcal (2) G-P(sol) polarization free energy of solvation -32.461 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.260 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.978 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.439 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.238 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds