Wall clock time and date at job start Thu Mar 4 2021 13:20:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.37783 * 119.85172 * 2 1 4 4 C 1.39701 * 119.90855 * 179.97438 * 3 2 1 5 5 C 1.47535 * 120.19532 * 179.97438 * 4 3 2 6 6 O 1.21589 * 120.00071 * 180.02562 * 5 4 3 7 7 N 1.34775 * 119.99870 * 0.02562 * 5 4 3 8 8 C 1.46497 * 120.00126 * 180.02562 * 7 5 4 9 9 H 1.09002 * 112.84935 * 25.32833 * 8 7 5 10 10 C 1.53786 * 113.61643 * 156.52505 * 8 7 5 11 11 C 1.53783 * 87.08050 * 140.06125 * 10 8 7 12 12 H 1.09000 * 113.61254 * 219.93295 * 11 10 8 13 13 C 1.50702 * 113.61044 * 89.12049 * 11 10 8 14 14 N 1.34775 * 120.00040 * 180.02562 * 13 11 10 15 15 O 1.21285 * 120.00081 * 359.97438 * 13 11 10 16 16 C 1.53781 * 113.61305 * 254.13352 * 8 7 5 17 17 C 1.40142 * 119.61646 * 0.24940 * 4 3 2 18 18 O 1.35653 * 120.14966 * 179.72635 * 17 4 3 19 19 C 1.38712 * 119.69906 * 359.49499 * 17 4 3 20 20 C 1.50693 * 119.96058 * 180.27452 * 19 17 4 21 21 O 1.42900 * 109.47287 * 285.23575 * 20 19 17 22 22 Si 1.86301 * 109.47258 * 165.23442 * 20 19 17 23 23 C 1.38050 * 120.08050 * 0.50932 * 19 17 4 24 24 H 1.08998 * 109.47327 * 90.00160 * 1 2 3 25 25 H 1.08997 * 109.47110 * 210.00338 * 1 2 3 26 26 H 1.09001 * 109.46880 * 330.00206 * 1 2 3 27 27 H 1.08001 * 120.04299 * 359.97438 * 3 2 1 28 28 H 0.97006 * 119.99816 * 359.97438 * 7 5 4 29 29 H 1.08992 * 113.61675 * 254.61383 * 10 8 7 30 30 H 1.09005 * 113.61030 * 25.43033 * 10 8 7 31 31 H 0.97000 * 119.99731 * 359.97438 * 14 13 11 32 32 H 0.97000 * 120.00347 * 179.97438 * 14 13 11 33 33 H 1.08999 * 113.61567 * 334.48111 * 16 8 7 34 34 H 1.08998 * 113.61196 * 105.38466 * 16 8 7 35 35 H 0.96698 * 114.00287 * 90.00475 * 18 17 4 36 36 H 1.09004 * 109.47290 * 45.23284 * 20 19 17 37 37 H 0.96702 * 114.00146 * 299.99729 * 21 20 19 38 38 H 1.48499 * 109.99779 * 58.68340 * 22 20 19 39 39 H 1.48504 * 109.99753 * 179.97438 * 22 20 19 40 40 H 1.08002 * 119.80301 * 179.76694 * 23 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1929 1.1950 0.0000 4 6 3.5899 1.1964 0.0005 5 6 4.3306 2.4723 0.0000 6 8 5.5465 2.4694 0.0000 7 7 3.6596 3.6411 -0.0005 8 6 4.3951 4.9081 -0.0017 9 1 5.3926 4.8180 -0.4317 10 6 3.5864 6.0894 -0.5635 11 6 4.2042 6.9430 0.5566 12 1 3.5028 7.6444 1.0084 13 6 5.5113 7.5877 0.1730 14 7 6.1653 8.3644 1.0593 15 8 5.9751 7.4069 -0.9330 16 6 4.3717 5.6351 1.3532 17 6 4.2837 -0.0212 -0.0042 18 8 5.6401 -0.0325 -0.0094 19 6 3.5770 -1.2148 0.0012 20 6 4.3171 -2.5275 0.0024 21 8 4.8553 -2.7721 -1.2986 22 14 3.1440 -3.9014 0.4574 23 6 2.1966 -1.2017 0.0006 24 1 -0.3634 0.0000 -1.0276 25 1 -0.3633 -0.8899 0.5139 26 1 -0.3633 0.8900 0.5138 27 1 1.6511 2.1293 -0.0004 28 1 2.6895 3.6434 -0.0009 29 1 3.8943 6.3927 -1.5640 30 1 2.5076 5.9623 -0.4728 31 1 5.7945 8.5087 1.9439 32 1 7.0067 8.7791 0.8125 33 1 3.5072 5.3848 1.9682 34 1 5.3131 5.5720 1.8989 35 1 6.0368 -0.0374 0.8725 36 1 5.1283 -2.4867 0.7293 37 1 4.1886 -2.8211 -1.9973 38 1 2.0166 -3.9472 -0.5080 39 1 3.8617 -5.2015 0.4615 40 1 1.6509 -2.1337 0.0010 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_13422088.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:19 Heat of formation + Delta-G solvation = -92.459976 kcal Electronic energy + Delta-G solvation = -25238.968206 eV Core-core repulsion = 21407.287594 eV Total energy + Delta-G solvation = -3831.680613 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.130 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -41.92219 -41.35247 -39.84972 -38.28315 -37.96821 -37.59775 -34.75255 -34.46013 -33.11661 -32.59208 -27.72781 -27.29862 -26.86504 -26.78672 -24.87895 -22.78495 -22.00777 -21.43248 -20.36526 -19.57264 -18.42399 -18.35367 -18.09546 -17.76444 -17.33789 -16.83978 -16.73115 -16.11608 -15.98588 -15.80721 -15.54717 -15.42678 -14.96719 -14.85365 -14.65864 -14.34035 -14.15064 -13.65470 -13.64575 -13.47277 -13.30017 -13.09549 -13.03744 -12.60721 -12.23348 -11.87934 -11.77245 -11.70740 -11.66567 -10.94294 -10.83168 -10.69666 -10.46038 -10.19912 -9.99993 -9.53699 -5.03513 -0.33912 0.04628 1.20339 1.50110 1.57808 1.77797 1.90743 2.11903 2.43719 2.58647 3.17864 3.30018 3.32085 3.34872 3.48551 3.57471 3.63695 3.70352 3.75086 4.03895 4.07840 4.16845 4.25368 4.42599 4.45284 4.47808 4.52494 4.56413 4.66097 4.70104 4.77063 4.90308 4.93355 4.94807 5.06703 5.18101 5.29319 5.48945 5.57127 5.76410 6.29718 6.43119 6.48347 6.78428 7.25121 7.26666 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.164 4.164 5 C 0.559 3.441 6 O -0.515 6.515 7 N -0.719 5.719 8 C 0.125 3.875 9 H 0.121 0.879 10 C -0.127 4.127 11 C -0.140 4.140 12 H 0.111 0.889 13 C 0.532 3.468 14 N -0.853 5.853 15 O -0.535 6.535 16 C -0.135 4.135 17 C 0.192 3.808 18 O -0.467 6.467 19 C -0.151 4.151 20 C -0.066 4.066 21 O -0.519 6.519 22 Si 0.689 3.311 23 C -0.081 4.081 24 H 0.074 0.926 25 H 0.072 0.928 26 H 0.071 0.929 27 H 0.131 0.869 28 H 0.399 0.601 29 H 0.092 0.908 30 H 0.095 0.905 31 H 0.403 0.597 32 H 0.404 0.596 33 H 0.098 0.902 34 H 0.078 0.922 35 H 0.394 0.606 36 H 0.116 0.884 37 H 0.374 0.626 38 H -0.259 1.259 39 H -0.255 1.255 40 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.119 2.076 7.239 11.074 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.098 4.098 3 C -0.086 4.086 4 C -0.168 4.168 5 C 0.347 3.653 6 O -0.390 6.390 7 N -0.371 5.371 8 C 0.020 3.980 9 H 0.139 0.861 10 C -0.165 4.165 11 C -0.162 4.162 12 H 0.129 0.871 13 C 0.317 3.683 14 N -0.416 5.416 15 O -0.411 6.411 16 C -0.174 4.174 17 C 0.144 3.856 18 O -0.278 6.278 19 C -0.152 4.152 20 C -0.176 4.176 21 O -0.325 6.325 22 Si 0.590 3.410 23 C -0.099 4.099 24 H 0.093 0.907 25 H 0.091 0.909 26 H 0.090 0.910 27 H 0.149 0.851 28 H 0.234 0.766 29 H 0.111 0.889 30 H 0.114 0.886 31 H 0.231 0.769 32 H 0.235 0.765 33 H 0.116 0.884 34 H 0.097 0.903 35 H 0.253 0.747 36 H 0.134 0.866 37 H 0.221 0.779 38 H -0.184 1.184 39 H -0.180 1.180 40 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -6.930 1.094 5.951 9.200 hybrid contribution -0.174 0.708 -0.301 0.789 sum -7.104 1.802 5.649 9.254 Atomic orbital electron populations 1.20835 0.90041 1.03520 1.02936 1.19785 0.96736 0.92271 1.00964 1.21120 0.92115 0.98280 0.97037 1.20406 0.93950 0.93500 1.08954 1.18082 0.87371 0.83401 0.76495 1.90848 1.13029 1.87233 1.47899 1.45890 1.09965 1.05303 1.75936 1.22624 0.98130 0.81063 0.96152 0.86117 1.23234 0.99822 0.93742 0.99743 1.22277 0.95796 0.97657 1.00435 0.87093 1.20075 0.85720 0.78048 0.84506 1.43820 1.27323 1.52702 1.17745 1.90791 1.67970 1.60880 1.21492 1.23482 1.03758 0.92800 0.97396 1.18240 0.83970 0.89680 0.93671 1.84814 1.14019 1.95861 1.33071 1.20651 0.93974 0.95748 1.04800 1.24914 1.05076 0.98841 0.88733 1.86685 1.36475 1.93214 1.16082 0.95159 0.77904 0.77656 0.90268 1.21170 0.92904 0.98553 0.97314 0.90737 0.90911 0.90998 0.85136 0.76560 0.88933 0.88624 0.76906 0.76489 0.88353 0.90339 0.74740 0.86599 0.77909 1.18395 1.17988 0.84639 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.43 10.00 36.01 0.36 0.79 16 2 C -0.10 0.15 5.87 -104.67 -0.61 -0.46 16 3 C -0.07 0.08 9.18 -39.20 -0.36 -0.28 16 4 C -0.16 -0.27 5.89 -104.85 -0.62 -0.89 16 5 C 0.56 1.80 7.76 -12.47 -0.10 1.70 16 6 O -0.51 -3.72 14.78 -16.59 -0.25 -3.97 16 7 N -0.72 0.04 5.31 -54.06 -0.29 -0.24 16 8 C 0.13 0.08 3.86 -67.12 -0.26 -0.18 16 9 H 0.12 0.53 7.42 -51.93 -0.39 0.15 16 10 C -0.13 0.14 7.20 -25.92 -0.19 -0.05 16 11 C -0.14 0.26 4.35 -90.81 -0.40 -0.13 16 12 H 0.11 -0.48 8.14 -51.93 -0.42 -0.90 16 13 C 0.53 0.57 7.36 -10.99 -0.08 0.49 16 14 N -0.85 1.89 8.87 31.22 0.28 2.17 16 15 O -0.54 -3.18 16.58 5.55 0.09 -3.08 16 16 C -0.14 0.25 7.48 -25.78 -0.19 0.06 16 17 C 0.19 0.47 6.69 -38.69 -0.26 0.21 16 18 O -0.47 -1.81 10.91 -40.54 -0.44 -2.26 16 19 C -0.15 -0.08 5.27 -104.52 -0.55 -0.63 16 20 C -0.07 -0.02 2.37 36.00 0.09 0.07 16 21 O -0.52 -1.40 12.88 -35.23 -0.45 -1.85 16 22 Si 0.69 -0.92 30.24 -169.99 -5.14 -6.06 16 23 C -0.08 0.08 8.30 -39.54 -0.33 -0.25 16 24 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 25 H 0.07 -0.31 8.08 -51.93 -0.42 -0.73 16 26 H 0.07 -0.34 8.08 -51.93 -0.42 -0.76 16 27 H 0.13 -0.53 6.40 -52.49 -0.34 -0.87 16 28 H 0.40 -1.27 6.74 -40.82 -0.28 -1.54 16 29 H 0.09 0.11 7.43 -51.93 -0.39 -0.28 16 30 H 0.10 -0.35 8.11 -51.93 -0.42 -0.77 16 31 H 0.40 -2.11 8.83 -40.82 -0.36 -2.47 16 32 H 0.40 -0.98 8.93 -40.82 -0.36 -1.34 16 33 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 34 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 35 H 0.39 0.03 9.06 45.56 0.41 0.44 16 36 H 0.12 -0.04 7.83 -51.93 -0.41 -0.45 16 37 H 0.37 -0.11 8.70 45.56 0.40 0.29 16 38 H -0.26 -0.01 6.68 56.52 0.38 0.37 16 39 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 40 H 0.14 -0.34 4.83 -52.49 -0.25 -0.59 16 LS Contribution 337.94 15.07 5.09 5.09 Total: 0.00 -12.61 337.94 -8.73 -21.35 By element: Atomic # 1 Polarization: -7.46 SS G_CDS: -4.13 Total: -11.59 kcal Atomic # 6 Polarization: 3.94 SS G_CDS: -3.49 Total: 0.45 kcal Atomic # 7 Polarization: 1.94 SS G_CDS: -0.01 Total: 1.93 kcal Atomic # 8 Polarization: -10.11 SS G_CDS: -1.05 Total: -11.16 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.14 Total: -6.06 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -12.61 -8.73 -21.35 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13422088.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.114 kcal (2) G-P(sol) polarization free energy of solvation -12.615 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.728 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.732 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.346 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.460 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds