Wall clock time and date at job start Thu Mar 4 2021 13:20:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 C 1.46904 * 111.00055 * 2 1 4 4 C 1.39043 * 111.00262 * 123.95337 * 2 1 3 5 5 C 1.39207 * 119.93311 * 119.99855 * 4 2 1 6 6 C 1.50699 * 119.96316 * 0.02562 * 5 4 2 7 7 O 1.42898 * 109.47376 * 284.97977 * 6 5 4 8 8 Si 1.86295 * 109.47264 * 164.97741 * 6 5 4 9 9 C 1.37624 * 120.07184 * 180.02562 * 5 4 2 10 10 C 1.39779 * 119.93062 * 0.02562 * 9 5 4 11 11 C 1.47519 * 120.06799 * 180.02562 * 10 9 5 12 12 O 1.21593 * 120.00072 * 359.97438 * 11 10 9 13 13 N 1.34777 * 119.99665 * 179.97438 * 11 10 9 14 14 C 1.46499 * 119.99665 * 179.72393 * 13 11 10 15 15 H 1.09002 * 112.85201 * 24.08188 * 14 13 11 16 16 C 1.53784 * 113.61491 * 155.28109 * 14 13 11 17 17 C 1.53783 * 87.08338 * 139.98310 * 16 14 13 18 18 H 1.09003 * 113.61162 * 219.93677 * 17 16 14 19 19 C 1.50696 * 113.61711 * 89.11643 * 17 16 14 20 20 N 1.34776 * 119.99953 * 180.02562 * 19 17 16 21 21 O 1.21282 * 120.00046 * 359.97438 * 19 17 16 22 22 C 1.53780 * 87.07825 * 334.56565 * 17 16 14 23 23 C 1.39817 * 119.85947 * 0.27191 * 10 9 5 24 24 C 1.37582 * 119.93147 * 359.47158 * 23 10 9 25 25 H 1.08999 * 109.47051 * 296.04559 * 1 2 3 26 26 H 1.08994 * 109.46971 * 56.04255 * 1 2 3 27 27 H 1.08998 * 109.46734 * 176.04537 * 1 2 3 28 28 H 1.08996 * 109.47283 * 183.95529 * 3 2 1 29 29 H 1.09002 * 109.47122 * 303.95751 * 3 2 1 30 30 H 1.09002 * 109.46806 * 63.95284 * 3 2 1 31 31 H 1.09009 * 109.47238 * 44.97826 * 6 5 4 32 32 H 0.96708 * 114.00028 * 59.99824 * 7 6 5 33 33 H 1.48502 * 109.99828 * 300.00310 * 8 6 5 34 34 H 1.48497 * 109.99963 * 61.31581 * 8 6 5 35 35 H 1.07994 * 120.03496 * 179.97438 * 9 5 4 36 36 H 0.97001 * 120.00485 * 0.02562 * 13 11 10 37 37 H 1.09000 * 113.61044 * 254.52540 * 16 14 13 38 38 H 1.09001 * 113.61354 * 25.42535 * 16 14 13 39 39 H 0.97006 * 120.00041 * 359.97438 * 20 19 17 40 40 H 0.96997 * 120.00326 * 180.02562 * 20 19 17 41 41 H 1.08998 * 113.61772 * 270.88604 * 22 17 16 42 42 H 1.09001 * 113.61751 * 139.98662 * 22 17 16 43 43 H 1.08004 * 120.03142 * 179.72201 * 23 10 9 44 44 H 1.08010 * 119.96474 * 180.22929 * 24 23 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3715 0.0000 4 6 1.9673 -0.7250 1.0767 5 6 2.7794 -1.8331 0.8518 6 6 3.1175 -2.2447 -0.5579 7 8 1.9827 -2.8750 -1.1553 8 14 4.5477 -3.4381 -0.5303 9 6 3.2738 -2.5530 1.9154 10 6 2.9593 -2.1709 3.2227 11 6 3.4880 -2.9401 4.3650 12 8 4.1978 -3.9079 4.1699 13 7 3.1843 -2.5701 5.6249 14 6 3.7044 -3.3376 6.7592 15 1 4.6137 -3.8877 6.5168 16 6 3.8056 -2.5229 8.0596 17 6 3.3028 -3.7780 8.7924 18 1 2.5927 -3.5624 9.5908 19 6 4.4074 -4.7066 9.2267 20 7 4.1108 -5.8473 9.8804 21 8 5.5632 -4.4279 8.9872 22 6 2.6377 -4.1888 7.4681 23 6 2.1383 -1.0612 3.4451 24 6 1.6515 -0.3424 2.3778 25 1 -0.3633 0.4512 0.9233 26 1 -0.3633 0.5740 -0.8524 27 1 -0.3633 -1.0252 -0.0709 28 1 3.0828 1.3433 -0.0709 29 1 1.5898 1.9164 -0.8524 30 1 1.7044 1.8723 0.9233 31 1 3.3909 -1.3633 -1.1382 32 1 1.1989 -2.3104 -1.2031 33 1 5.7343 -2.7945 0.0887 34 1 4.1767 -4.6579 0.2309 35 1 3.9034 -3.4128 1.7402 36 1 2.6178 -1.7983 5.7805 37 1 4.8261 -2.2439 8.3217 38 1 3.1114 -1.6837 8.1042 39 1 3.1863 -6.0704 10.0716 40 1 4.8217 -6.4449 10.1603 41 1 1.6243 -3.8050 7.3510 42 1 2.7153 -5.2544 7.2526 43 1 1.8899 -0.7662 4.4540 44 1 1.0203 0.5171 2.5491 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_13422196.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:20 Heat of formation + Delta-G solvation = -42.211550 kcal Electronic energy + Delta-G solvation = -27033.862107 eV Core-core repulsion = 23146.541473 eV Total energy + Delta-G solvation = -3887.320634 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.157 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.06861 -41.49898 -40.41759 -38.50431 -37.71754 -37.36569 -34.97852 -34.59548 -32.83172 -31.42150 -28.57386 -27.56270 -26.97580 -26.81524 -25.80089 -23.57861 -23.12730 -22.68465 -21.36743 -20.42823 -19.20007 -18.48215 -18.11195 -17.95334 -17.85638 -17.42887 -16.87635 -16.46469 -16.32675 -16.04125 -15.99284 -15.70703 -15.60871 -15.18803 -15.09264 -14.69857 -14.41096 -14.12854 -13.92715 -13.71947 -13.53060 -13.39745 -13.19251 -13.11935 -13.04644 -12.75341 -12.65798 -12.39683 -11.94396 -11.76403 -11.46077 -11.32381 -11.06467 -11.01330 -10.74944 -10.35629 -10.24389 -9.90234 -9.64117 -4.96499 -0.55080 0.00120 1.28252 1.45798 1.49121 1.55428 1.88191 1.91372 2.46698 2.49434 2.67419 3.29429 3.35315 3.42111 3.48080 3.54933 3.66732 3.81381 3.84514 3.96643 4.03734 4.10302 4.20213 4.36790 4.37634 4.41055 4.46247 4.57095 4.60236 4.62114 4.66508 4.74141 4.78677 4.88174 4.92145 4.97937 4.98144 4.99717 5.02066 5.10060 5.34842 5.41378 5.76378 5.79539 6.14253 6.30746 6.38400 6.65571 6.97271 7.26030 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 N -0.524 5.524 3 C 0.025 3.975 4 C 0.134 3.866 5 C -0.113 4.113 6 C -0.060 4.060 7 O -0.543 6.543 8 Si 0.794 3.206 9 C -0.083 4.083 10 C -0.150 4.150 11 C 0.553 3.447 12 O -0.590 6.590 13 N -0.692 5.692 14 C 0.105 3.895 15 H 0.073 0.927 16 C -0.117 4.117 17 C -0.128 4.128 18 H 0.152 0.848 19 C 0.521 3.479 20 N -0.837 5.837 21 O -0.596 6.596 22 C -0.122 4.122 23 C -0.055 4.055 24 C -0.147 4.147 25 H 0.044 0.956 26 H 0.092 0.908 27 H 0.070 0.930 28 H 0.064 0.936 29 H 0.092 0.908 30 H 0.044 0.956 31 H 0.098 0.902 32 H 0.375 0.625 33 H -0.278 1.278 34 H -0.304 1.304 35 H 0.108 0.892 36 H 0.420 0.580 37 H 0.066 0.934 38 H 0.135 0.865 39 H 0.420 0.580 40 H 0.405 0.595 41 H 0.131 0.869 42 H 0.065 0.935 43 H 0.169 0.831 44 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.058 6.719 2.307 12.314 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 N -0.246 5.246 3 C -0.121 4.121 4 C 0.039 3.961 5 C -0.115 4.115 6 C -0.170 4.170 7 O -0.350 6.350 8 Si 0.699 3.301 9 C -0.103 4.103 10 C -0.153 4.153 11 C 0.342 3.658 12 O -0.471 6.471 13 N -0.344 5.344 14 C 0.000 4.000 15 H 0.092 0.908 16 C -0.155 4.155 17 C -0.150 4.150 18 H 0.170 0.830 19 C 0.306 3.694 20 N -0.400 5.400 21 O -0.476 6.476 22 C -0.161 4.161 23 C -0.074 4.074 24 C -0.167 4.167 25 H 0.063 0.937 26 H 0.111 0.889 27 H 0.089 0.911 28 H 0.083 0.917 29 H 0.110 0.890 30 H 0.063 0.937 31 H 0.115 0.885 32 H 0.225 0.775 33 H -0.204 1.204 34 H -0.232 1.232 35 H 0.125 0.875 36 H 0.260 0.740 37 H 0.085 0.915 38 H 0.153 0.847 39 H 0.251 0.749 40 H 0.236 0.764 41 H 0.149 0.851 42 H 0.084 0.916 43 H 0.186 0.814 44 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -7.793 5.252 1.947 9.597 hybrid contribution -0.967 0.743 1.866 2.229 sum -8.760 5.995 3.813 11.279 Atomic orbital electron populations 1.22614 0.83751 1.03351 1.02680 1.59440 1.10022 1.15351 1.39758 1.22549 1.00859 0.86123 1.02561 1.18937 0.94226 0.92627 0.90318 1.20321 0.99184 0.95965 0.95985 1.24979 0.96963 1.05642 0.89448 1.86683 1.22739 1.43559 1.82018 0.92912 0.74111 0.75851 0.87187 1.21053 0.98176 0.98348 0.92679 1.19884 1.03598 0.99501 0.92312 1.18580 0.79492 0.83415 0.84351 1.90796 1.39980 1.30184 1.86143 1.45692 1.51955 1.32774 1.03959 1.22683 0.97705 0.94950 0.84668 0.90844 1.23283 1.03552 0.97056 0.91641 1.22220 0.96995 0.95802 0.99972 0.83013 1.20728 0.89694 0.82616 0.76352 1.43754 1.13932 1.22839 1.59433 1.90764 1.23720 1.75666 1.57471 1.23423 1.00132 1.00654 0.91853 1.21496 0.93025 0.91488 1.01344 1.21940 1.01379 1.01405 0.91937 0.93706 0.88902 0.91100 0.91746 0.88959 0.93729 0.88454 0.77546 1.20441 1.23226 0.87492 0.74025 0.91535 0.84702 0.74875 0.76381 0.85134 0.91575 0.81371 0.82086 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.15 9.20 127.69 1.18 1.02 16 2 N -0.52 1.80 3.67 -745.10 -2.73 -0.93 16 3 C 0.02 -0.15 9.38 127.69 1.20 1.05 16 4 C 0.13 0.04 4.66 38.47 0.18 0.22 16 5 C -0.11 -0.69 5.28 -19.78 -0.10 -0.79 16 6 C -0.06 -0.29 2.29 71.24 0.16 -0.13 16 7 O -0.54 -2.89 12.65 -148.98 -1.89 -4.77 16 8 Si 0.79 5.70 30.40 68.60 2.09 7.78 16 9 C -0.08 -0.91 8.19 22.50 0.18 -0.73 16 10 C -0.15 -0.99 5.88 -20.08 -0.12 -1.11 16 11 C 0.55 5.75 7.76 86.69 0.67 6.42 16 12 O -0.59 -12.68 15.94 -4.01 -0.06 -12.75 16 13 N -0.69 -0.75 5.30 -443.20 -2.35 -3.10 16 14 C 0.10 0.33 3.89 45.52 0.18 0.51 16 15 H 0.07 1.01 7.39 -2.39 -0.02 0.99 16 16 C -0.12 0.29 7.20 31.12 0.22 0.52 16 17 C -0.13 0.57 4.34 -11.01 -0.05 0.52 16 18 H 0.15 -1.83 8.14 -2.39 -0.02 -1.85 16 19 C 0.52 1.79 7.36 87.66 0.64 2.43 16 20 N -0.84 3.23 8.87 -173.54 -1.54 1.69 16 21 O -0.60 -8.89 16.58 -3.04 -0.05 -8.94 16 22 C -0.12 0.43 7.46 31.12 0.23 0.67 16 23 C -0.05 0.14 9.53 22.50 0.21 0.36 16 24 C -0.15 0.52 8.53 22.36 0.19 0.71 16 25 H 0.04 -0.38 7.09 -2.39 -0.02 -0.40 16 26 H 0.09 -0.85 8.12 -2.39 -0.02 -0.87 16 27 H 0.07 -0.43 7.84 -2.39 -0.02 -0.45 16 28 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 29 H 0.09 -0.75 8.12 -2.39 -0.02 -0.77 16 30 H 0.04 -0.34 7.32 -2.39 -0.02 -0.36 16 31 H 0.10 0.15 7.78 -2.38 -0.02 0.13 16 32 H 0.38 0.14 8.06 -74.05 -0.60 -0.46 16 33 H -0.28 -3.18 7.11 99.48 0.71 -2.48 16 34 H -0.30 -4.88 6.81 99.48 0.68 -4.20 16 35 H 0.11 1.79 4.50 -2.91 -0.01 1.78 16 36 H 0.42 -3.30 6.75 -92.71 -0.63 -3.93 16 37 H 0.07 0.25 7.43 -2.39 -0.02 0.23 16 38 H 0.13 -1.41 8.12 -2.39 -0.02 -1.43 16 39 H 0.42 -4.62 8.83 -92.70 -0.82 -5.44 16 40 H 0.41 -1.52 8.93 -92.71 -0.83 -2.34 16 41 H 0.13 -1.24 8.14 -2.39 -0.02 -1.26 16 42 H 0.07 -0.03 8.09 -2.39 -0.02 -0.05 16 43 H 0.17 -1.88 6.39 -2.91 -0.02 -1.90 16 44 H 0.16 -1.48 6.99 -2.91 -0.02 -1.50 16 Total: 0.00 -32.84 360.46 -3.33 -36.17 By element: Atomic # 1 Polarization: -25.04 SS G_CDS: -1.78 Total: -26.82 kcal Atomic # 6 Polarization: 6.69 SS G_CDS: 4.99 Total: 11.68 kcal Atomic # 7 Polarization: 4.28 SS G_CDS: -6.62 Total: -2.35 kcal Atomic # 8 Polarization: -24.46 SS G_CDS: -2.00 Total: -26.46 kcal Atomic # 14 Polarization: 5.70 SS G_CDS: 2.09 Total: 7.78 kcal Total: -32.84 -3.33 -36.17 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13422196.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.044 kcal (2) G-P(sol) polarization free energy of solvation -32.835 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.880 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.332 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.167 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.212 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds