Wall clock time and date at job start Thu Mar 4 2021 13:20:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34779 * 1 3 3 O 1.21280 * 120.00302 * 2 1 4 4 C 1.50699 * 119.99707 * 180.02562 * 2 1 3 5 5 H 1.09002 * 112.84978 * 48.80109 * 4 2 1 6 6 C 1.53777 * 113.61433 * 179.97438 * 4 2 1 7 7 C 1.53777 * 87.08054 * 89.11593 * 6 4 2 8 8 H 1.08996 * 113.61755 * 270.79988 * 7 6 4 9 9 N 1.46504 * 113.61629 * 139.98221 * 7 6 4 10 10 C 1.34772 * 120.00416 * 155.00341 * 9 7 6 11 11 O 1.21650 * 119.99935 * 359.97438 * 10 9 7 12 12 C 1.47041 * 120.00159 * 179.97438 * 10 9 7 13 13 C 1.36226 * 123.49256 * 179.97438 * 12 10 9 14 14 Cl 1.73598 * 124.60644 * 0.04084 * 13 12 10 15 15 S 1.70449 * 110.78961 * 180.02562 * 13 12 10 16 16 C 1.75499 * 92.46415 * 0.02562 * 15 13 12 17 17 C 1.50706 * 124.68106 * 180.02562 * 16 15 13 18 18 O 1.42903 * 109.46818 * 120.02786 * 17 16 15 19 19 Si 1.86295 * 109.47320 * 0.02588 * 17 16 15 20 20 C 1.32688 * 110.62986 * 0.26481 * 16 15 13 21 21 C 1.53781 * 87.08269 * 25.43422 * 7 6 4 22 22 H 0.97003 * 120.00381 * 179.97438 * 1 2 3 23 23 H 0.97008 * 119.99911 * 359.97438 * 1 2 3 24 24 H 1.09002 * 113.61408 * 334.56703 * 6 4 2 25 25 H 1.08997 * 113.69357 * 203.67776 * 6 4 2 26 26 H 0.97006 * 119.99792 * 335.00085 * 9 7 6 27 27 H 1.09004 * 109.46950 * 240.02301 * 17 16 15 28 28 H 0.96696 * 113.99807 * 299.99439 * 18 17 16 29 29 H 1.48501 * 110.00190 * 179.97438 * 19 17 16 30 30 H 1.48497 * 110.00133 * 301.31802 * 19 17 16 31 31 H 1.08005 * 123.44915 * 179.72677 * 20 16 15 32 32 H 1.08996 * 113.61697 * 89.10913 * 21 7 6 33 33 H 1.08998 * 113.61847 * 220.01680 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3478 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3051 -0.0006 5 1 1.7398 -2.0021 -0.7567 6 6 3.6295 -1.1342 -0.0011 7 6 3.5496 -1.1197 1.5345 8 1 3.4021 -0.1248 1.9547 9 7 4.6353 -1.8569 2.1856 10 6 5.0048 -1.5417 3.4428 11 8 4.4371 -0.6446 4.0368 12 6 6.0941 -2.2820 4.0965 13 6 6.5251 -2.0231 5.3626 14 17 5.8661 -0.7939 6.3963 15 16 7.7989 -3.0701 5.7941 16 6 7.7601 -3.8814 4.2384 17 6 8.6689 -5.0155 3.8397 18 8 7.8838 -6.1686 3.5294 19 14 9.8232 -5.4107 5.2476 20 6 6.8234 -3.3549 3.4599 21 6 2.2505 -1.9309 1.3962 22 1 -0.4851 -0.8400 -0.0004 23 1 -0.4850 0.8401 0.0004 24 1 3.9630 -0.1892 -0.4300 25 1 4.1662 -1.9938 -0.4024 26 1 5.0883 -2.5721 1.7119 27 1 9.2497 -4.7251 2.9642 28 1 7.3401 -6.4835 4.2644 29 1 10.7244 -6.5280 4.8673 30 1 10.6229 -4.2103 5.6009 31 1 6.6242 -3.6956 2.4545 32 1 2.4089 -3.0091 1.3768 33 1 1.4707 -1.6292 2.0954 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_13431040.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:27 Heat of formation + Delta-G solvation = -53.051136 kcal Electronic energy + Delta-G solvation = -21531.013572 eV Core-core repulsion = 17904.614120 eV Total energy + Delta-G solvation = -3626.399452 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.032 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.79901 -40.73281 -39.01437 -38.34246 -37.91284 -36.92536 -34.78744 -34.33671 -31.64012 -27.75398 -26.81808 -26.73480 -25.29256 -22.73835 -22.21070 -20.88878 -20.23285 -19.38084 -18.41632 -18.05330 -17.80845 -17.63163 -17.01837 -16.48591 -16.20730 -16.00544 -15.71528 -15.65594 -15.38692 -14.77609 -14.57286 -14.38063 -14.21396 -14.02672 -13.51247 -13.29718 -13.09263 -12.86051 -12.59599 -12.39756 -12.14551 -11.86208 -11.84155 -11.65867 -11.03161 -10.93067 -10.70107 -10.58034 -10.17683 -9.88727 -9.64848 -5.11785 -0.63899 -0.19928 0.47972 0.72297 1.04080 1.20394 1.54133 1.58518 1.91307 2.13255 2.17933 2.54383 3.28670 3.39029 3.43933 3.61137 3.73450 3.83610 3.89021 3.90582 4.27722 4.37490 4.46620 4.57013 4.69804 4.77757 4.81583 4.87263 4.97742 5.00319 5.09898 5.48845 5.84139 6.43181 6.46122 6.72573 7.14377 7.30964 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.522 3.478 3 O -0.595 6.595 4 C -0.130 4.130 5 H 0.149 0.851 6 C -0.120 4.120 7 C 0.111 3.889 8 H 0.076 0.924 9 N -0.695 5.695 10 C 0.568 3.432 11 O -0.565 6.565 12 C -0.167 4.167 13 C -0.141 4.141 14 Cl 0.000 7.000 15 S 0.264 5.736 16 C -0.227 4.227 17 C -0.017 4.017 18 O -0.541 6.541 19 Si 0.710 3.290 20 C -0.066 4.066 21 C -0.120 4.120 22 H 0.419 0.581 23 H 0.405 0.595 24 H 0.064 0.936 25 H 0.131 0.869 26 H 0.418 0.582 27 H 0.135 0.865 28 H 0.399 0.601 29 H -0.265 1.265 30 H -0.262 1.262 31 H 0.184 0.816 32 H 0.128 0.872 33 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.234 -10.168 -2.001 10.436 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.307 3.693 3 O -0.476 6.476 4 C -0.151 4.151 5 H 0.166 0.834 6 C -0.158 4.158 7 C 0.006 3.994 8 H 0.094 0.906 9 N -0.347 5.347 10 C 0.354 3.646 11 O -0.445 6.445 12 C -0.186 4.186 13 C -0.287 4.287 14 Cl 0.029 6.971 15 S 0.529 5.471 16 C -0.345 4.345 17 C -0.130 4.130 18 O -0.349 6.349 19 Si 0.613 3.387 20 C -0.095 4.095 21 C -0.159 4.159 22 H 0.251 0.749 23 H 0.236 0.764 24 H 0.083 0.917 25 H 0.149 0.851 26 H 0.256 0.744 27 H 0.152 0.848 28 H 0.249 0.751 29 H -0.190 1.190 30 H -0.188 1.188 31 H 0.201 0.799 32 H 0.147 0.853 33 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges 0.823 -9.023 -0.486 9.074 hybrid contribution -1.446 0.992 -1.587 2.365 sum -0.623 -8.031 -2.073 8.317 Atomic orbital electron populations 1.43758 1.06355 1.13828 1.76063 1.20717 0.83509 0.91040 0.74017 1.90761 1.69459 1.35579 1.51801 1.22221 0.96544 0.94708 1.01673 0.83350 1.23275 0.94534 1.04413 0.93596 1.22590 0.87411 0.95958 0.93413 0.90580 1.45656 1.37048 1.38097 1.13892 1.17815 0.82162 0.82407 0.82221 1.90863 1.56250 1.32253 1.65086 1.20346 1.01986 1.02179 0.94103 1.25825 1.04515 1.01182 0.97224 1.98426 1.84218 1.50551 1.63915 1.83243 1.26395 1.23892 1.13576 1.24964 1.05629 1.05930 0.97958 1.24401 0.96884 0.83129 1.08633 1.86513 1.62027 1.42773 1.43616 0.94309 0.81629 0.80587 0.82217 1.21129 0.93968 0.92724 1.01633 1.23402 0.96631 1.02009 0.93860 0.74901 0.76414 0.91721 0.85091 0.74376 0.84815 0.75067 1.19035 1.18827 0.79938 0.85347 0.91429 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 3.58 8.87 -173.53 -1.54 2.04 16 2 C 0.52 1.57 7.36 87.66 0.64 2.21 16 3 O -0.60 -8.58 16.58 -3.03 -0.05 -8.63 16 4 C -0.13 0.60 4.34 -11.02 -0.05 0.55 16 5 H 0.15 -1.74 8.14 -2.39 -0.02 -1.76 16 6 C -0.12 0.30 7.20 31.12 0.22 0.53 16 7 C 0.11 0.23 3.89 45.52 0.18 0.41 16 8 H 0.08 0.91 7.39 -2.39 -0.02 0.90 16 9 N -0.69 0.09 5.33 -443.67 -2.37 -2.28 16 10 C 0.57 4.19 7.79 86.55 0.67 4.86 16 11 O -0.56 -9.35 14.51 -4.19 -0.06 -9.41 16 12 C -0.17 -0.52 5.98 -19.84 -0.12 -0.64 16 13 C -0.14 -0.65 6.87 67.35 0.46 -0.19 16 14 Cl 0.00 0.00 27.20 -2.72 -0.07 -0.07 16 15 S 0.26 -0.58 20.17 -56.49 -1.14 -1.72 16 16 C -0.23 1.12 5.68 24.52 0.14 1.26 16 17 C -0.02 0.12 2.94 71.24 0.21 0.33 16 18 O -0.54 3.91 12.85 -148.98 -1.91 2.00 16 19 Si 0.71 -4.29 30.91 68.60 2.12 -2.17 16 20 C -0.07 0.27 9.71 22.70 0.22 0.49 16 21 C -0.12 0.52 7.46 31.12 0.23 0.76 16 22 H 0.42 -4.77 8.83 -92.71 -0.82 -5.59 16 23 H 0.40 -1.69 8.93 -92.70 -0.83 -2.52 16 24 H 0.06 0.25 7.43 -2.39 -0.02 0.23 16 25 H 0.13 -1.28 8.12 -2.39 -0.02 -1.30 16 26 H 0.42 -3.24 7.27 -92.70 -0.67 -3.91 16 27 H 0.13 -1.03 7.96 -2.39 -0.02 -1.05 16 28 H 0.40 -5.78 8.70 -74.06 -0.64 -6.43 16 29 H -0.27 -0.08 7.11 99.48 0.71 0.62 16 30 H -0.26 0.31 7.11 99.48 0.71 1.02 16 31 H 0.18 -1.80 7.10 -2.91 -0.02 -1.82 16 32 H 0.13 -1.26 8.14 -2.39 -0.02 -1.28 16 33 H 0.07 -0.11 8.09 -2.39 -0.02 -0.13 16 Total: 0.00 -28.80 315.97 -3.91 -32.71 By element: Atomic # 1 Polarization: -21.32 SS G_CDS: -1.70 Total: -23.03 kcal Atomic # 6 Polarization: 7.75 SS G_CDS: 2.82 Total: 10.56 kcal Atomic # 7 Polarization: 3.67 SS G_CDS: -3.91 Total: -0.24 kcal Atomic # 8 Polarization: -14.02 SS G_CDS: -2.03 Total: -16.05 kcal Atomic # 14 Polarization: -4.29 SS G_CDS: 2.12 Total: -2.17 kcal Atomic # 16 Polarization: -0.58 SS G_CDS: -1.14 Total: -1.72 kcal Atomic # 17 Polarization: 0.00 SS G_CDS: -0.07 Total: -0.07 kcal Total: -28.80 -3.91 -32.71 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13431040.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.339 kcal (2) G-P(sol) polarization free energy of solvation -28.802 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.141 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.910 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.712 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.051 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds