Wall clock time and date at job start Thu Mar 4 2021 13:20:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34775 * 1 3 3 O 1.21280 * 120.00173 * 2 1 4 4 C 1.50699 * 119.99876 * 179.97438 * 2 1 3 5 5 H 1.09002 * 112.90791 * 311.25083 * 4 2 1 6 6 C 1.53779 * 113.61429 * 82.50410 * 4 2 1 7 7 C 1.53779 * 87.08402 * 139.98140 * 6 4 2 8 8 H 1.09000 * 113.69407 * 220.01236 * 7 6 4 9 9 N 1.46499 * 113.61746 * 89.11614 * 7 6 4 10 10 C 1.34771 * 119.99903 * 107.50534 * 9 7 6 11 11 O 1.21607 * 120.00311 * 0.02562 * 10 9 7 12 12 C 1.47382 * 119.99775 * 180.02562 * 10 9 7 13 13 C 1.36414 * 127.19278 * 359.67703 * 12 10 9 14 14 O 1.33654 * 108.40051 * 179.83773 * 13 12 10 15 15 C 1.34223 * 110.90365 * 0.45121 * 14 13 12 16 16 C 1.50695 * 125.43656 * 179.71977 * 15 14 13 17 17 O 1.42905 * 109.46998 * 120.00377 * 16 15 14 18 18 Si 1.86300 * 109.47261 * 0.02562 * 16 15 14 19 19 C 1.34173 * 109.12498 * 359.72456 * 15 14 13 20 20 C 1.53784 * 113.61308 * 179.97438 * 4 2 1 21 21 H 0.97003 * 120.00306 * 180.02562 * 1 2 3 22 22 H 0.97001 * 120.00133 * 0.02562 * 1 2 3 23 23 H 1.09006 * 113.61307 * 25.43343 * 6 4 2 24 24 H 1.09007 * 113.61642 * 254.53100 * 6 4 2 25 25 H 0.97001 * 119.99349 * 287.50724 * 9 7 6 26 26 H 1.08004 * 125.80177 * 0.02562 * 13 12 10 27 27 H 1.08999 * 109.47341 * 240.00445 * 16 15 14 28 28 H 0.96702 * 113.99458 * 299.99692 * 17 16 15 29 29 H 1.48500 * 110.00192 * 179.97438 * 18 16 15 30 30 H 1.48500 * 110.00012 * 301.31683 * 18 16 15 31 31 H 1.07998 * 127.02319 * 180.02562 * 19 15 14 32 32 H 1.09004 * 113.61451 * 105.47354 * 20 4 2 33 33 H 1.08994 * 113.61477 * 334.56656 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3051 0.0006 5 1 1.7400 -2.0032 0.7558 6 6 2.2500 -1.9311 -1.3961 7 6 3.6825 -2.3122 -0.9866 8 1 4.4151 -2.1817 -1.7831 9 7 3.7781 -3.6205 -0.3344 10 6 4.3239 -4.6628 -0.9916 11 8 4.7374 -4.5172 -2.1259 12 6 4.4195 -5.9791 -0.3357 13 6 4.0111 -6.3040 0.9247 14 8 4.2730 -7.5980 1.1326 15 6 4.8531 -8.1485 0.0546 16 6 5.2910 -9.5855 -0.0638 17 8 4.5968 -10.2072 -1.1473 18 14 4.9022 -10.4858 1.5202 19 6 4.9809 -7.2149 -0.9006 20 6 3.6295 -1.1341 -0.0001 21 1 -0.4851 -0.8400 0.0004 22 1 -0.4850 0.8400 -0.0004 23 1 2.2065 -1.2042 -2.2073 24 1 1.5999 -2.7904 -1.5611 25 1 3.4485 -3.7364 0.5705 26 1 3.5512 -5.6307 1.6330 27 1 6.3642 -9.6242 -0.2500 28 1 3.6349 -10.2092 -1.0485 29 1 5.3287 -11.9044 1.4160 30 1 5.5925 -9.8299 2.6597 31 1 5.4085 -7.3449 -1.8838 32 1 4.0935 -1.3497 0.9624 33 1 3.9630 -0.1895 -0.4298 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_13456056.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:29 Heat of formation + Delta-G solvation = -66.599764 kcal Electronic energy + Delta-G solvation = -19671.592875 eV Core-core repulsion = 16280.335024 eV Total energy + Delta-G solvation = -3391.257851 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.098 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -43.70412 -41.65958 -40.29252 -38.48947 -37.99428 -34.76336 -34.51093 -33.63420 -31.69512 -27.67041 -26.76631 -26.57185 -24.90531 -22.30649 -22.22099 -21.15041 -20.32354 -19.29756 -18.48608 -17.82286 -17.73925 -17.48427 -17.25819 -16.90223 -16.24946 -16.08117 -15.88083 -15.63405 -15.34262 -14.98641 -14.45035 -14.23773 -14.01386 -13.65541 -13.60279 -13.35522 -12.90856 -12.80515 -12.20579 -11.76811 -11.62740 -11.27520 -10.95625 -10.93006 -10.65726 -10.62806 -10.19613 -9.76183 -4.96788 0.27607 0.82529 1.20318 1.52825 1.59219 1.83845 1.94258 1.98898 2.22939 2.63851 3.31581 3.36091 3.43670 3.49765 3.61317 3.74390 3.92017 3.99428 4.26563 4.29559 4.39785 4.52499 4.57742 4.71128 4.78001 4.86283 4.92255 4.93422 5.06142 5.13824 5.49065 5.85324 5.88702 6.45858 6.48209 6.64775 7.14152 7.35178 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.839 5.839 2 C 0.520 3.480 3 O -0.597 6.597 4 C -0.126 4.126 5 H 0.154 0.846 6 C -0.127 4.127 7 C 0.118 3.882 8 H 0.083 0.917 9 N -0.688 5.688 10 C 0.590 3.410 11 O -0.586 6.586 12 C -0.270 4.270 13 C 0.071 3.929 14 O -0.163 6.163 15 C -0.052 4.052 16 C -0.038 4.038 17 O -0.545 6.545 18 Si 0.801 3.199 19 C -0.153 4.153 20 C -0.120 4.120 21 H 0.419 0.581 22 H 0.404 0.596 23 H 0.085 0.915 24 H 0.095 0.905 25 H 0.419 0.581 26 H 0.267 0.733 27 H 0.128 0.872 28 H 0.400 0.600 29 H -0.287 1.287 30 H -0.287 1.287 31 H 0.141 0.859 32 H 0.097 0.903 33 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.855 -3.371 6.618 10.810 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.401 5.401 2 C 0.305 3.695 3 O -0.478 6.478 4 C -0.147 4.147 5 H 0.171 0.829 6 C -0.166 4.166 7 C 0.012 3.988 8 H 0.101 0.899 9 N -0.341 5.341 10 C 0.380 3.620 11 O -0.467 6.467 12 C -0.274 4.274 13 C 0.000 4.000 14 O -0.059 6.059 15 C -0.101 4.101 16 C -0.147 4.147 17 O -0.354 6.354 18 Si 0.704 3.296 19 C -0.173 4.173 20 C -0.159 4.159 21 H 0.250 0.750 22 H 0.234 0.766 23 H 0.104 0.896 24 H 0.113 0.887 25 H 0.258 0.742 26 H 0.283 0.717 27 H 0.145 0.855 28 H 0.251 0.749 29 H -0.214 1.214 30 H -0.214 1.214 31 H 0.159 0.841 32 H 0.115 0.885 33 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -6.184 -3.416 6.520 9.613 hybrid contribution 0.119 0.742 -0.641 0.988 sum -6.065 -2.675 5.878 8.860 Atomic orbital electron populations 1.43834 1.06528 1.13751 1.76023 1.20929 0.83365 0.91254 0.73912 1.90754 1.69477 1.35565 1.51997 1.22907 0.96063 0.94660 1.01042 0.82892 1.23292 0.96900 1.01076 0.95312 1.21740 0.98152 0.82294 0.96599 0.89900 1.45243 1.61864 1.08099 1.18848 1.17515 0.76265 0.83537 0.84724 1.90804 1.50381 1.84943 1.20539 1.21417 1.13603 0.94737 0.97668 1.25376 0.96131 0.82539 0.95944 1.83722 1.60721 1.23322 1.38119 1.22734 1.03608 0.97531 0.86186 1.24669 0.99401 0.87192 1.03437 1.86549 1.25635 1.78470 1.44734 0.93197 0.89896 0.75347 0.71110 1.22547 1.02985 0.91019 1.00719 1.23166 0.94248 0.97710 1.00774 0.75004 0.76550 0.89634 0.88652 0.74238 0.71722 0.85487 0.74874 1.21412 1.21354 0.84096 0.88486 0.89347 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 6.14 8.87 -173.54 -1.54 4.60 16 2 C 0.52 -0.18 7.63 87.66 0.67 0.49 16 3 O -0.60 -6.52 16.74 -3.03 -0.05 -6.57 16 4 C -0.13 0.89 4.03 -11.01 -0.04 0.84 16 5 H 0.15 -2.28 8.14 -2.39 -0.02 -2.30 16 6 C -0.13 0.61 7.43 31.12 0.23 0.84 16 7 C 0.12 -0.23 4.32 45.51 0.20 -0.03 16 8 H 0.08 0.37 7.46 -2.39 -0.02 0.35 16 9 N -0.69 3.38 5.25 -443.41 -2.33 1.05 16 10 C 0.59 2.33 7.81 86.65 0.68 3.01 16 11 O -0.59 -8.81 16.58 -4.05 -0.07 -8.88 16 12 C -0.27 -0.09 6.31 -18.99 -0.12 -0.21 16 13 C 0.07 -0.59 11.61 67.39 0.78 0.20 16 14 O -0.16 0.75 8.89 4.37 0.04 0.79 16 15 C -0.05 0.04 6.20 24.76 0.15 0.19 16 16 C -0.04 0.09 2.98 71.23 0.21 0.30 16 17 O -0.55 0.79 12.86 -148.98 -1.92 -1.12 16 18 Si 0.80 -3.65 32.08 68.60 2.20 -1.45 16 19 C -0.15 -0.60 10.88 23.65 0.26 -0.35 16 20 C -0.12 0.42 7.15 31.11 0.22 0.64 16 21 H 0.42 -5.92 8.83 -92.71 -0.82 -6.74 16 22 H 0.40 -2.86 8.93 -92.71 -0.83 -3.68 16 23 H 0.09 -0.16 8.09 -2.38 -0.02 -0.18 16 24 H 0.09 -0.68 8.14 -2.38 -0.02 -0.69 16 25 H 0.42 -5.80 7.67 -92.71 -0.71 -6.51 16 26 H 0.27 -5.44 7.47 -2.91 -0.02 -5.47 16 27 H 0.13 -0.21 7.96 -2.39 -0.02 -0.23 16 28 H 0.40 -4.01 8.70 -74.06 -0.64 -4.65 16 29 H -0.29 -0.57 7.11 99.48 0.71 0.14 16 30 H -0.29 -0.33 7.11 99.48 0.71 0.38 16 31 H 0.14 1.04 8.06 -2.91 -0.02 1.02 16 32 H 0.10 -0.65 8.14 -2.39 -0.02 -0.67 16 33 H 0.09 0.19 7.43 -2.39 -0.02 0.17 16 Total: 0.00 -32.53 296.87 -2.19 -34.73 By element: Atomic # 1 Polarization: -27.30 SS G_CDS: -1.77 Total: -29.06 kcal Atomic # 6 Polarization: 2.68 SS G_CDS: 3.24 Total: 5.91 kcal Atomic # 7 Polarization: 9.52 SS G_CDS: -3.87 Total: 5.66 kcal Atomic # 8 Polarization: -13.78 SS G_CDS: -2.00 Total: -15.78 kcal Atomic # 14 Polarization: -3.65 SS G_CDS: 2.20 Total: -1.45 kcal Total: -32.53 -2.19 -34.73 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13456056.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.873 kcal (2) G-P(sol) polarization free energy of solvation -32.534 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.407 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.193 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.727 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.600 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds