Wall clock time and date at job start Thu Mar 4 2021 13:20:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37872 * 126.46038 * 2 1 4 4 C 1.46679 * 126.22994 * 0.02562 * 3 2 1 5 5 O 1.21692 * 120.00223 * 0.02562 * 4 3 2 6 6 N 1.34779 * 119.99513 * 179.97438 * 4 3 2 7 7 C 1.46507 * 119.99693 * 180.02562 * 6 4 3 8 8 H 1.08996 * 112.84884 * 23.80554 * 7 6 4 9 9 C 1.53778 * 113.61385 * 155.00419 * 7 6 4 10 10 C 1.53777 * 87.08213 * 139.98016 * 9 7 6 11 11 H 1.09003 * 113.61237 * 219.93654 * 10 9 7 12 12 C 1.50695 * 113.61837 * 89.11404 * 10 9 7 13 13 N 1.34771 * 120.00425 * 180.02562 * 12 10 9 14 14 O 1.21283 * 119.99892 * 359.97438 * 12 10 9 15 15 C 1.53785 * 113.61042 * 252.50114 * 7 6 4 16 16 N 1.37650 * 107.53509 * 180.02562 * 3 2 1 17 17 C 1.35539 * 108.64195 * 359.77503 * 16 3 2 18 18 C 1.50698 * 125.56465 * 180.22727 * 17 16 3 19 19 O 1.42906 * 109.46668 * 65.19330 * 18 17 16 20 20 Si 1.86297 * 109.47231 * 185.19095 * 18 17 16 21 21 C 1.35452 * 108.87225 * 0.37378 * 17 16 3 22 22 H 1.09002 * 109.47387 * 270.00411 * 1 2 3 23 23 H 1.09009 * 109.46926 * 29.99567 * 1 2 3 24 24 H 1.08991 * 109.47721 * 149.99655 * 1 2 3 25 25 H 0.97001 * 120.00537 * 0.02562 * 6 4 3 26 26 H 1.08994 * 113.61485 * 254.52892 * 9 7 6 27 27 H 1.08998 * 113.61173 * 25.43011 * 9 7 6 28 28 H 0.97002 * 120.00011 * 359.97438 * 13 12 10 29 29 H 0.97004 * 120.00620 * 180.02562 * 13 12 10 30 30 H 1.08997 * 113.61484 * 334.56205 * 15 7 6 31 31 H 1.09002 * 113.61573 * 105.47440 * 15 7 6 32 32 H 0.96998 * 125.68092 * 180.02562 * 16 3 2 33 33 H 1.09002 * 109.47122 * 305.19583 * 18 17 16 34 34 H 0.96689 * 114.00346 * 60.00456 * 19 18 17 35 35 H 1.48498 * 109.99852 * 179.97438 * 20 18 17 36 36 H 1.48494 * 110.00367 * 301.32163 * 20 18 17 37 37 H 1.08002 * 126.07027 * 179.89697 * 21 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8899 2.5092 0.0005 5 8 0.7027 2.7766 0.0015 6 7 2.8039 3.4998 0.0010 7 6 2.3680 4.8985 0.0021 8 1 1.3648 5.0289 0.4079 9 6 3.4041 5.8661 0.5979 10 6 3.0212 6.8436 -0.5258 11 1 3.8727 7.3743 -0.9518 12 6 1.8807 7.7605 -0.1659 13 7 1.4394 8.6694 -1.0578 14 8 1.3594 7.6799 0.9262 15 6 2.5889 5.6136 -1.3414 16 7 3.6284 0.6624 -0.0006 17 6 3.6217 -0.6930 0.0041 18 6 4.8433 -1.5755 0.0100 19 8 5.5575 -1.3919 1.2341 20 14 4.3226 -3.3576 -0.1439 21 6 2.3379 -1.1248 -0.0007 22 1 -0.3634 0.0001 1.0277 23 1 -0.3633 0.8901 -0.5138 24 1 -0.3634 -0.8898 -0.5138 25 1 3.7502 3.2867 0.0006 26 1 3.1453 6.2236 1.5945 27 1 4.4297 5.5033 0.5304 28 1 1.8562 8.7336 -1.9313 29 1 0.7055 9.2598 -0.8260 30 1 3.3917 5.1818 -1.9390 31 1 1.6719 5.7672 -1.9103 32 1 4.4192 1.2242 -0.0004 33 1 5.4866 -1.3110 -0.8292 34 1 5.0450 -1.6088 2.0248 35 1 5.5183 -4.2381 -0.1399 36 1 3.4194 -3.7216 0.9771 37 1 2.0135 -2.1549 -0.0002 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_12220716_13940406.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:32 Heat of formation + Delta-G solvation = -39.449038 kcal Electronic energy + Delta-G solvation = -21716.615384 eV Core-core repulsion = 18268.715919 eV Total energy + Delta-G solvation = -3447.899464 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.126 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.59701 -41.66346 -39.99866 -38.31070 -37.86301 -34.85327 -34.55268 -33.35642 -31.62814 -28.19606 -27.74910 -26.90433 -26.19138 -23.27528 -22.29032 -21.56186 -20.80152 -20.10913 -19.46079 -18.31248 -18.13616 -18.11236 -17.13189 -16.78175 -16.44432 -16.09586 -15.76637 -15.60892 -15.35949 -15.04501 -14.70301 -14.40308 -14.20643 -13.87552 -13.67450 -13.57895 -13.46107 -13.38936 -13.10013 -12.90193 -12.23022 -11.92212 -11.86962 -11.74711 -11.07106 -10.95590 -10.78514 -10.71766 -10.16942 -9.81533 -9.15842 -4.98657 0.37566 1.10348 1.54467 1.55881 1.58899 1.82488 2.04517 2.16020 2.36471 2.41286 3.19127 3.26858 3.30283 3.51371 3.62032 3.71249 3.82679 4.12559 4.16580 4.18914 4.37352 4.41653 4.43237 4.62803 4.71076 4.76037 4.86002 4.89395 5.00707 5.05392 5.23513 5.36235 5.48075 5.66594 5.73890 5.92040 6.20485 6.25737 6.27054 6.45604 7.16691 7.22448 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.063 4.063 3 C -0.056 4.056 4 C 0.591 3.409 5 O -0.519 6.519 6 N -0.723 5.723 7 C 0.126 3.874 8 H 0.124 0.876 9 C -0.127 4.127 10 C -0.140 4.140 11 H 0.111 0.889 12 C 0.533 3.467 13 N -0.852 5.852 14 O -0.536 6.536 15 C -0.135 4.135 16 N -0.524 5.524 17 C 0.028 3.972 18 C -0.061 4.061 19 O -0.534 6.534 20 Si 0.717 3.283 21 C -0.200 4.200 22 H 0.069 0.931 23 H 0.081 0.919 24 H 0.066 0.934 25 H 0.394 0.606 26 H 0.093 0.907 27 H 0.094 0.906 28 H 0.403 0.597 29 H 0.404 0.596 30 H 0.097 0.903 31 H 0.079 0.921 32 H 0.416 0.584 33 H 0.119 0.881 34 H 0.381 0.619 35 H -0.256 1.256 36 H -0.255 1.255 37 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.028 0.200 -5.393 6.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.072 4.072 3 C -0.169 4.169 4 C 0.379 3.621 5 O -0.394 6.394 6 N -0.374 5.374 7 C 0.021 3.979 8 H 0.142 0.858 9 C -0.166 4.166 10 C -0.162 4.162 11 H 0.129 0.871 12 C 0.317 3.683 13 N -0.415 5.415 14 O -0.411 6.411 15 C -0.175 4.175 16 N -0.121 5.121 17 C -0.090 4.090 18 C -0.170 4.170 19 O -0.341 6.341 20 Si 0.616 3.384 21 C -0.225 4.225 22 H 0.087 0.913 23 H 0.100 0.900 24 H 0.085 0.915 25 H 0.228 0.772 26 H 0.111 0.889 27 H 0.113 0.887 28 H 0.231 0.769 29 H 0.235 0.765 30 H 0.116 0.884 31 H 0.098 0.902 32 H 0.253 0.747 33 H 0.137 0.863 34 H 0.229 0.771 35 H -0.180 1.180 36 H -0.179 1.179 37 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 3.518 -0.266 -4.662 5.847 hybrid contribution 1.075 1.116 0.663 1.685 sum 4.593 0.850 -3.999 6.149 Atomic orbital electron populations 1.20400 0.88839 1.03294 1.02558 1.19947 0.96060 0.90330 1.00840 1.20248 0.83551 0.93527 1.19539 1.17080 0.85951 0.83006 0.76082 1.90849 1.15912 1.83110 1.49548 1.45874 1.09090 1.06113 1.76277 1.22653 1.00687 0.78401 0.96151 0.85818 1.23243 0.99232 0.94425 0.99692 1.22230 0.98003 0.95540 1.00388 0.87089 1.20053 0.83648 0.80368 0.84243 1.43818 1.39779 1.39255 1.18698 1.90789 1.58092 1.69867 1.22397 1.23436 1.02860 0.93840 0.97330 1.41853 1.07105 1.06562 1.56575 1.21030 0.96798 0.83269 1.07950 1.24892 0.92791 1.09492 0.89853 1.86592 1.42556 1.89441 1.15481 0.94224 0.81582 0.72207 0.90378 1.20634 0.90856 0.99177 1.11806 0.91276 0.89992 0.91519 0.77215 0.88875 0.88746 0.76889 0.76455 0.88429 0.90211 0.74672 0.86309 0.77107 1.18037 1.17875 0.83238 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.19 9.83 36.01 0.35 0.16 16 2 C -0.06 -0.15 6.21 -104.16 -0.65 -0.79 16 3 C -0.06 -0.10 7.06 -81.98 -0.58 -0.68 16 4 C 0.59 1.72 7.79 -12.85 -0.10 1.62 16 5 O -0.52 -3.36 14.40 5.20 0.07 -3.29 16 6 N -0.72 0.23 5.35 -54.32 -0.29 -0.06 16 7 C 0.13 0.04 3.89 -67.11 -0.26 -0.22 16 8 H 0.12 0.47 7.39 -51.93 -0.38 0.09 16 9 C -0.13 0.16 7.20 -25.92 -0.19 -0.03 16 10 C -0.14 0.28 4.34 -90.96 -0.40 -0.12 16 11 H 0.11 -0.48 8.14 -51.93 -0.42 -0.90 16 12 C 0.53 0.46 7.36 -10.99 -0.08 0.38 16 13 N -0.85 2.03 8.87 31.22 0.28 2.31 16 14 O -0.54 -3.01 16.58 5.56 0.09 -2.92 16 15 C -0.14 0.26 7.46 -25.91 -0.19 0.07 16 16 N -0.52 0.39 5.99 -5.69 -0.03 0.36 16 17 C 0.03 -0.01 6.46 -81.95 -0.53 -0.54 16 18 C -0.06 0.10 3.08 36.00 0.11 0.21 16 19 O -0.53 0.19 12.88 -35.23 -0.45 -0.27 16 20 Si 0.72 -1.52 30.56 -169.99 -5.19 -6.71 16 21 C -0.20 -0.09 9.27 -39.98 -0.37 -0.46 16 22 H 0.07 0.15 8.14 -51.93 -0.42 -0.28 16 23 H 0.08 0.30 6.49 -51.92 -0.34 -0.03 16 24 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 25 H 0.39 -1.29 7.86 -40.82 -0.32 -1.62 16 26 H 0.09 0.09 7.43 -51.93 -0.39 -0.30 16 27 H 0.09 -0.34 8.12 -51.93 -0.42 -0.76 16 28 H 0.40 -2.15 8.83 -40.82 -0.36 -2.51 16 29 H 0.40 -1.06 8.93 -40.82 -0.36 -1.42 16 30 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 31 H 0.08 -0.09 8.09 -51.93 -0.42 -0.51 16 32 H 0.42 -1.35 8.19 -40.82 -0.33 -1.69 16 33 H 0.12 -0.34 7.96 -51.93 -0.41 -0.75 16 34 H 0.38 -1.01 8.70 45.56 0.40 -0.61 16 35 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 36 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 37 H 0.15 -0.19 6.19 -52.49 -0.33 -0.51 16 LS Contribution 315.54 15.07 4.76 4.76 Total: 0.00 -10.47 315.54 -8.21 -18.68 By element: Atomic # 1 Polarization: -7.89 SS G_CDS: -4.56 Total: -12.44 kcal Atomic # 6 Polarization: 2.47 SS G_CDS: -2.88 Total: -0.40 kcal Atomic # 7 Polarization: 2.65 SS G_CDS: -0.05 Total: 2.60 kcal Atomic # 8 Polarization: -6.19 SS G_CDS: -0.29 Total: -6.48 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.19 Total: -6.71 kcal Total LS contribution 4.76 Total: 4.76 kcal Total: -10.47 -8.21 -18.68 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13940406.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.767 kcal (2) G-P(sol) polarization free energy of solvation -10.472 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.239 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.210 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.683 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.449 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds