Wall clock time and date at job start Thu Mar 4 2021 13:20:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.37872 * 126.46038 * 2 1 4 4 C 1.46679 * 126.22994 * 0.02562 * 3 2 1 5 5 O 1.21692 * 120.00223 * 0.02562 * 4 3 2 6 6 N 1.34779 * 119.99513 * 179.97438 * 4 3 2 7 7 C 1.46507 * 119.99693 * 180.02562 * 6 4 3 8 8 H 1.08996 * 112.84884 * 23.80554 * 7 6 4 9 9 C 1.53778 * 113.61385 * 155.00419 * 7 6 4 10 10 C 1.53777 * 87.08213 * 139.98016 * 9 7 6 11 11 H 1.09003 * 113.61237 * 219.93654 * 10 9 7 12 12 C 1.50695 * 113.61837 * 89.11404 * 10 9 7 13 13 N 1.34771 * 120.00425 * 180.02562 * 12 10 9 14 14 O 1.21283 * 119.99892 * 359.97438 * 12 10 9 15 15 C 1.53785 * 113.61042 * 252.50114 * 7 6 4 16 16 N 1.37650 * 107.53509 * 180.02562 * 3 2 1 17 17 C 1.35539 * 108.64195 * 359.77503 * 16 3 2 18 18 C 1.50698 * 125.56465 * 180.22727 * 17 16 3 19 19 O 1.42906 * 109.46668 * 65.19330 * 18 17 16 20 20 Si 1.86297 * 109.47231 * 185.19095 * 18 17 16 21 21 C 1.35452 * 108.87225 * 0.37378 * 17 16 3 22 22 H 1.09002 * 109.47387 * 270.00411 * 1 2 3 23 23 H 1.09009 * 109.46926 * 29.99567 * 1 2 3 24 24 H 1.08991 * 109.47721 * 149.99655 * 1 2 3 25 25 H 0.97001 * 120.00537 * 0.02562 * 6 4 3 26 26 H 1.08994 * 113.61485 * 254.52892 * 9 7 6 27 27 H 1.08998 * 113.61173 * 25.43011 * 9 7 6 28 28 H 0.97002 * 120.00011 * 359.97438 * 13 12 10 29 29 H 0.97004 * 120.00620 * 180.02562 * 13 12 10 30 30 H 1.08997 * 113.61484 * 334.56205 * 15 7 6 31 31 H 1.09002 * 113.61573 * 105.47440 * 15 7 6 32 32 H 0.96998 * 125.68092 * 180.02562 * 16 3 2 33 33 H 1.09002 * 109.47122 * 305.19583 * 18 17 16 34 34 H 0.96689 * 114.00346 * 60.00456 * 19 18 17 35 35 H 1.48498 * 109.99852 * 179.97438 * 20 18 17 36 36 H 1.48494 * 110.00367 * 301.32163 * 20 18 17 37 37 H 1.08002 * 126.07027 * 179.89697 * 21 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8899 2.5092 0.0005 5 8 0.7027 2.7766 0.0015 6 7 2.8039 3.4998 0.0010 7 6 2.3680 4.8985 0.0021 8 1 1.3648 5.0289 0.4079 9 6 3.4041 5.8661 0.5979 10 6 3.0212 6.8436 -0.5258 11 1 3.8727 7.3743 -0.9518 12 6 1.8807 7.7605 -0.1659 13 7 1.4394 8.6694 -1.0578 14 8 1.3594 7.6799 0.9262 15 6 2.5889 5.6136 -1.3414 16 7 3.6284 0.6624 -0.0006 17 6 3.6217 -0.6930 0.0041 18 6 4.8433 -1.5755 0.0100 19 8 5.5575 -1.3919 1.2341 20 14 4.3226 -3.3576 -0.1439 21 6 2.3379 -1.1248 -0.0007 22 1 -0.3634 0.0001 1.0277 23 1 -0.3633 0.8901 -0.5138 24 1 -0.3634 -0.8898 -0.5138 25 1 3.7502 3.2867 0.0006 26 1 3.1453 6.2236 1.5945 27 1 4.4297 5.5033 0.5304 28 1 1.8562 8.7336 -1.9313 29 1 0.7055 9.2598 -0.8260 30 1 3.3917 5.1818 -1.9390 31 1 1.6719 5.7672 -1.9103 32 1 4.4192 1.2242 -0.0004 33 1 5.4866 -1.3110 -0.8292 34 1 5.0450 -1.6088 2.0248 35 1 5.5183 -4.2381 -0.1399 36 1 3.4194 -3.7216 0.9771 37 1 2.0135 -2.1549 -0.0002 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_13940406.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:31 Heat of formation + Delta-G solvation = -46.906810 kcal Electronic energy + Delta-G solvation = -21716.938777 eV Core-core repulsion = 18268.715919 eV Total energy + Delta-G solvation = -3448.222858 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.126 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.63630 -41.66706 -40.15524 -38.38316 -37.81834 -34.95075 -34.57319 -33.44018 -31.63069 -28.28498 -27.74047 -26.79109 -26.17583 -23.30336 -22.36915 -21.55480 -20.84721 -20.12180 -19.48204 -18.26713 -18.12957 -18.04938 -17.18133 -16.76474 -16.47807 -16.13210 -15.78007 -15.69899 -15.39137 -15.12180 -14.75304 -14.40893 -14.27156 -13.89043 -13.65270 -13.59304 -13.55779 -13.35363 -13.09855 -12.97255 -12.26356 -11.90132 -11.84886 -11.71518 -11.17597 -11.02312 -10.81109 -10.71771 -10.25435 -9.83765 -9.22007 -4.82648 0.27910 1.22986 1.51119 1.52403 1.70359 1.89725 2.01584 2.21539 2.22687 2.51616 3.33512 3.35936 3.38953 3.57036 3.67933 3.80635 3.85383 4.12433 4.20870 4.25281 4.49189 4.50891 4.63367 4.70511 4.74421 4.80083 4.83133 4.86885 4.94551 5.01647 5.14476 5.32188 5.41783 5.61629 5.82530 5.83536 6.30396 6.40063 6.41212 6.47640 7.05544 7.28936 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 C -0.086 4.086 3 C -0.069 4.069 4 C 0.585 3.415 5 O -0.566 6.566 6 N -0.705 5.705 7 C 0.112 3.888 8 H 0.079 0.921 9 C -0.121 4.121 10 C -0.129 4.129 11 H 0.149 0.851 12 C 0.522 3.478 13 N -0.836 5.836 14 O -0.595 6.595 15 C -0.120 4.120 16 N -0.511 5.511 17 C 0.039 3.961 18 C -0.061 4.061 19 O -0.548 6.548 20 Si 0.793 3.207 21 C -0.208 4.208 22 H 0.062 0.938 23 H 0.060 0.940 24 H 0.083 0.917 25 H 0.411 0.589 26 H 0.065 0.935 27 H 0.129 0.871 28 H 0.419 0.581 29 H 0.406 0.594 30 H 0.126 0.874 31 H 0.069 0.931 32 H 0.429 0.571 33 H 0.138 0.862 34 H 0.389 0.611 35 H -0.297 1.297 36 H -0.284 1.284 37 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.321 0.094 -6.819 9.299 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.095 4.095 3 C -0.182 4.182 4 C 0.374 3.626 5 O -0.445 6.445 6 N -0.356 5.356 7 C 0.007 3.993 8 H 0.097 0.903 9 C -0.159 4.159 10 C -0.151 4.151 11 H 0.166 0.834 12 C 0.307 3.693 13 N -0.399 5.399 14 O -0.475 6.475 15 C -0.159 4.159 16 N -0.108 5.108 17 C -0.080 4.080 18 C -0.170 4.170 19 O -0.356 6.356 20 Si 0.696 3.304 21 C -0.232 4.232 22 H 0.081 0.919 23 H 0.079 0.921 24 H 0.102 0.898 25 H 0.248 0.752 26 H 0.084 0.916 27 H 0.147 0.853 28 H 0.251 0.749 29 H 0.237 0.763 30 H 0.145 0.855 31 H 0.088 0.912 32 H 0.269 0.731 33 H 0.155 0.845 34 H 0.239 0.761 35 H -0.225 1.225 36 H -0.210 1.210 37 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges 5.868 -0.317 -6.142 8.501 hybrid contribution 0.376 1.130 1.128 1.641 sum 6.243 0.813 -5.014 8.049 Atomic orbital electron populations 1.20339 0.89407 1.03030 1.02064 1.20162 0.96225 0.91418 1.01721 1.20092 0.84638 0.92889 1.20605 1.17322 0.85687 0.83931 0.75632 1.90825 1.17908 1.83832 1.51976 1.45709 1.09572 1.05394 1.74887 1.22615 0.99322 0.79021 0.98381 0.90292 1.23275 1.00279 0.93902 0.98477 1.22216 0.97838 0.95122 0.99917 0.83373 1.20680 0.84027 0.80834 0.83722 1.43749 1.39239 1.38019 1.18928 1.90765 1.60142 1.71659 1.24979 1.23403 1.03403 0.93083 0.96032 1.41791 1.06681 1.06722 1.55640 1.21214 0.96933 0.83324 1.06511 1.25054 0.92562 1.09266 0.90119 1.86576 1.43239 1.89550 1.16227 0.93299 0.78303 0.70147 0.88649 1.20831 0.90983 0.99459 1.11959 0.91942 0.92126 0.89823 0.75164 0.91632 0.85337 0.74897 0.76348 0.85537 0.91174 0.73120 0.84464 0.76099 1.22503 1.21038 0.81797 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.55 9.83 71.24 0.70 0.15 16 2 C -0.09 -0.47 6.21 -19.56 -0.12 -0.59 16 3 C -0.07 -0.29 7.06 40.35 0.28 -0.01 16 4 C 0.59 4.33 7.79 86.45 0.67 5.01 16 5 O -0.57 -9.18 14.40 -4.32 -0.06 -9.25 16 6 N -0.70 0.20 5.35 -443.98 -2.38 -2.18 16 7 C 0.11 0.20 3.89 45.52 0.18 0.37 16 8 H 0.08 0.90 7.39 -2.39 -0.02 0.89 16 9 C -0.12 0.32 7.20 31.12 0.22 0.55 16 10 C -0.13 0.64 4.34 -11.01 -0.05 0.59 16 11 H 0.15 -1.78 8.14 -2.39 -0.02 -1.80 16 12 C 0.52 1.34 7.36 87.66 0.64 1.99 16 13 N -0.84 3.96 8.87 -173.54 -1.54 2.42 16 14 O -0.59 -8.30 16.58 -3.04 -0.05 -8.35 16 15 C -0.12 0.57 7.46 31.12 0.23 0.80 16 16 N -0.51 1.26 5.99 -171.93 -1.03 0.23 16 17 C 0.04 -0.09 6.46 41.34 0.27 0.18 16 18 C -0.06 0.31 3.08 71.24 0.22 0.53 16 19 O -0.55 1.19 12.88 -148.98 -1.92 -0.73 16 20 Si 0.79 -3.99 30.56 68.60 2.10 -1.89 16 21 C -0.21 -0.10 9.27 22.01 0.20 0.11 16 22 H 0.06 0.41 8.14 -2.39 -0.02 0.39 16 23 H 0.06 0.63 6.49 -2.38 -0.02 0.62 16 24 H 0.08 0.14 8.14 -2.39 -0.02 0.12 16 25 H 0.41 -3.19 7.86 -92.71 -0.73 -3.92 16 26 H 0.06 0.24 7.43 -2.39 -0.02 0.22 16 27 H 0.13 -1.25 8.12 -2.39 -0.02 -1.27 16 28 H 0.42 -4.95 8.83 -92.71 -0.82 -5.77 16 29 H 0.41 -1.89 8.93 -92.71 -0.83 -2.72 16 30 H 0.13 -1.27 8.14 -2.39 -0.02 -1.29 16 31 H 0.07 -0.15 8.09 -2.39 -0.02 -0.17 16 32 H 0.43 -3.55 8.19 -92.71 -0.76 -4.31 16 33 H 0.14 -1.15 7.96 -2.39 -0.02 -1.17 16 34 H 0.39 -2.48 8.70 -74.06 -0.64 -3.12 16 35 H -0.30 -0.64 7.11 99.48 0.71 0.07 16 36 H -0.28 0.02 7.11 99.48 0.71 0.73 16 37 H 0.16 -0.54 6.19 -2.91 -0.02 -0.56 16 Total: 0.00 -29.15 315.54 -3.99 -33.14 By element: Atomic # 1 Polarization: -20.50 SS G_CDS: -2.57 Total: -23.07 kcal Atomic # 6 Polarization: 6.22 SS G_CDS: 3.46 Total: 9.67 kcal Atomic # 7 Polarization: 5.42 SS G_CDS: -4.95 Total: 0.47 kcal Atomic # 8 Polarization: -16.29 SS G_CDS: -2.03 Total: -18.32 kcal Atomic # 14 Polarization: -3.99 SS G_CDS: 2.10 Total: -1.89 kcal Total: -29.15 -3.99 -33.14 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_13940406.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.767 kcal (2) G-P(sol) polarization free energy of solvation -29.147 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.914 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.992 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.140 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.907 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds