Wall clock time and date at job start Thu Mar 4 2021 13:20:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34774 * 1 3 3 O 1.21281 * 119.99871 * 2 1 4 4 C 1.50698 * 119.99769 * 180.02562 * 2 1 3 5 5 H 1.09001 * 112.84921 * 311.19719 * 4 2 1 6 6 C 1.53782 * 113.69032 * 82.46200 * 4 2 1 7 7 C 1.53962 * 87.11063 * 89.19672 * 6 4 2 8 8 H 1.08993 * 113.61598 * 270.84305 * 7 6 4 9 9 N 1.46501 * 113.66387 * 139.88885 * 7 6 4 10 10 C 1.34773 * 120.00122 * 107.55425 * 9 7 6 11 11 O 1.21289 * 119.99571 * 359.97438 * 10 9 7 12 12 C 1.50691 * 120.00316 * 179.97438 * 10 9 7 13 13 C 1.50709 * 109.47324 * 179.97438 * 12 10 9 14 14 C 1.34848 * 125.88802 * 274.69287 * 13 12 10 15 15 C 1.40896 * 107.41509 * 179.88582 * 14 13 12 16 16 C 1.34850 * 107.41406 * 0.37591 * 15 14 13 17 17 C 1.50701 * 125.89145 * 179.73642 * 16 15 14 18 18 O 1.42890 * 109.47569 * 120.04402 * 17 16 15 19 19 Si 1.86302 * 109.47064 * 0.04022 * 17 16 15 20 20 N 1.36342 * 125.88623 * 95.00269 * 13 12 10 21 21 C 1.53781 * 113.61351 * 179.97438 * 4 2 1 22 22 H 0.97001 * 120.00543 * 180.02562 * 1 2 3 23 23 H 0.97007 * 120.00422 * 359.97438 * 1 2 3 24 24 H 1.08997 * 113.61668 * 203.67223 * 6 4 2 25 25 H 1.08998 * 113.61674 * 334.49732 * 6 4 2 26 26 H 0.97002 * 119.99797 * 287.54884 * 9 7 6 27 27 H 1.09002 * 109.47503 * 300.00170 * 12 10 9 28 28 H 1.09005 * 109.47302 * 60.00162 * 12 10 9 29 29 H 1.07996 * 126.29358 * 0.02562 * 14 13 12 30 30 H 1.07990 * 126.29512 * 180.12976 * 15 14 13 31 31 H 1.09002 * 109.47097 * 240.05008 * 17 16 15 32 32 H 0.96706 * 113.99775 * 300.00261 * 18 17 16 33 33 H 1.48500 * 110.00027 * 180.02562 * 19 17 16 34 34 H 1.48504 * 110.00038 * 301.32213 * 19 17 16 35 35 H 0.96996 * 125.64141 * 359.95357 * 20 13 12 36 36 H 1.09002 * 113.61445 * 25.34938 * 21 4 2 37 37 H 1.09002 * 113.61408 * 156.16669 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0503 0.0000 4 6 2.1012 -1.3051 -0.0006 5 1 1.7398 -2.0028 0.7549 6 6 2.2501 -1.9320 -1.3969 7 6 3.5518 -1.1217 -1.5364 8 1 3.4042 -0.1275 -1.9580 9 7 4.6378 -1.8607 -2.1849 10 6 5.0094 -1.5474 -3.4420 11 8 4.4443 -0.6539 -4.0364 12 6 6.1269 -2.3071 -4.1089 13 6 6.3430 -1.7658 -5.4987 14 6 5.6700 -2.1393 -6.6059 15 6 6.1812 -1.3887 -7.6833 16 6 7.1527 -0.5913 -7.1946 17 6 7.9812 0.3822 -7.9926 18 8 7.7870 1.7029 -7.4828 19 14 7.4587 0.3234 -9.7799 20 7 7.2567 -0.8183 -5.8542 21 6 3.6294 -1.1341 -0.0011 22 1 -0.4851 -0.8400 0.0004 23 1 -0.4851 0.8401 0.0004 24 1 2.4086 -3.0102 -1.3769 25 1 1.4694 -1.6319 -2.0958 26 1 5.0896 -2.5754 -1.7095 27 1 7.0418 -2.1924 -3.5276 28 1 5.8638 -3.3633 -4.1676 29 1 4.8824 -2.8763 -6.6571 30 1 5.8574 -1.4449 -8.7120 31 1 9.0346 0.1133 -7.9131 32 1 6.8704 2.0088 -7.5223 33 1 8.2688 1.2786 -10.5776 34 1 7.6260 -1.0526 -10.3129 35 1 7.8777 -0.3783 -5.2530 36 1 3.9632 -0.1887 0.4265 37 1 4.1651 -1.9936 0.4020 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_14644196.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:33 Heat of formation + Delta-G solvation = -45.770201 kcal Electronic energy + Delta-G solvation = -21397.258129 eV Core-core repulsion = 17949.084559 eV Total energy + Delta-G solvation = -3448.173571 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.126 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.34100 -41.66371 -40.28856 -38.33661 -37.70090 -34.78856 -34.39794 -32.95159 -31.92435 -29.52238 -26.98020 -26.71378 -25.09908 -22.94749 -21.89890 -21.35980 -21.04798 -20.29319 -18.96322 -18.18791 -18.16169 -17.97668 -17.27488 -16.79050 -16.39567 -16.26268 -15.78646 -15.65914 -15.20167 -15.06694 -14.63998 -14.39943 -14.15114 -14.08646 -13.92565 -13.72666 -13.40305 -13.26125 -12.98985 -12.72837 -12.08871 -11.99977 -11.82191 -11.64700 -11.03720 -10.92076 -10.70422 -10.65742 -10.04327 -9.80223 -8.95797 -4.93604 1.10045 1.29509 1.53532 1.62150 1.67254 1.89175 1.91027 2.33699 2.51930 2.54803 3.40703 3.45573 3.48356 3.68014 3.75994 3.80065 3.90263 4.05458 4.21912 4.29810 4.37429 4.49052 4.56868 4.63012 4.70860 4.79189 4.82715 4.88504 5.01247 5.14203 5.25206 5.28681 5.55277 5.83856 5.99792 6.13650 6.42976 6.55627 6.62080 6.67115 7.29508 7.30870 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.521 3.479 3 O -0.596 6.596 4 C -0.132 4.132 5 H 0.147 0.853 6 C -0.120 4.120 7 C 0.112 3.888 8 H 0.070 0.930 9 N -0.704 5.704 10 C 0.508 3.492 11 O -0.579 6.579 12 C -0.066 4.066 13 C 0.031 3.969 14 C -0.200 4.200 15 C -0.203 4.203 16 C -0.022 4.022 17 C -0.056 4.056 18 O -0.562 6.562 19 Si 0.802 3.198 20 N -0.539 5.539 21 C -0.120 4.120 22 H 0.419 0.581 23 H 0.405 0.595 24 H 0.129 0.871 25 H 0.065 0.935 26 H 0.421 0.579 27 H 0.127 0.873 28 H 0.148 0.852 29 H 0.143 0.857 30 H 0.152 0.848 31 H 0.107 0.893 32 H 0.394 0.606 33 H -0.293 1.293 34 H -0.282 1.282 35 H 0.417 0.583 36 H 0.061 0.939 37 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.230 -8.510 4.333 10.081 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.307 3.693 3 O -0.477 6.477 4 C -0.154 4.154 5 H 0.165 0.835 6 C -0.159 4.159 7 C 0.006 3.994 8 H 0.089 0.911 9 N -0.357 5.357 10 C 0.295 3.705 11 O -0.458 6.458 12 C -0.106 4.106 13 C -0.083 4.083 14 C -0.224 4.224 15 C -0.228 4.228 16 C -0.136 4.136 17 C -0.166 4.166 18 O -0.369 6.369 19 Si 0.706 3.294 20 N -0.134 5.134 21 C -0.159 4.159 22 H 0.251 0.749 23 H 0.236 0.764 24 H 0.147 0.853 25 H 0.084 0.916 26 H 0.260 0.740 27 H 0.145 0.855 28 H 0.165 0.835 29 H 0.161 0.839 30 H 0.170 0.830 31 H 0.125 0.875 32 H 0.244 0.756 33 H -0.221 1.221 34 H -0.208 1.208 35 H 0.255 0.745 36 H 0.080 0.920 37 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -2.113 -7.454 3.300 8.421 hybrid contribution 0.291 0.147 0.936 0.991 sum -1.823 -7.307 4.236 8.640 Atomic orbital electron populations 1.43762 1.06374 1.13832 1.76044 1.20737 0.83507 0.91077 0.73989 1.90758 1.69480 1.35607 1.51860 1.22237 0.96686 0.94646 1.01818 0.83528 1.23428 0.96792 1.02042 0.93677 1.22489 0.87814 0.95804 0.93305 0.91137 1.45815 1.37030 1.38312 1.14539 1.21134 0.84263 0.83228 0.81839 1.90759 1.56927 1.33183 1.64961 1.20265 0.98410 1.01961 0.89962 1.19972 0.96039 0.96189 0.96083 1.20861 1.03817 1.05509 0.92204 1.20921 1.00230 1.01480 1.00131 1.21000 1.03644 1.04337 0.84580 1.25022 1.01029 0.81358 1.09143 1.86426 1.34809 1.29070 1.86629 0.92881 0.88608 0.78030 0.69930 1.41911 1.30827 1.32411 1.08254 1.23257 0.94398 1.04262 0.93940 0.74905 0.76416 0.85284 0.91636 0.74029 0.85539 0.83464 0.83912 0.83032 0.87550 0.75582 1.22067 1.20800 0.74529 0.91991 0.85057 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 3.91 8.87 -173.54 -1.54 2.37 16 2 C 0.52 1.34 7.37 87.66 0.65 1.98 16 3 O -0.60 -8.35 16.60 -3.03 -0.05 -8.40 16 4 C -0.13 0.70 4.34 -11.01 -0.05 0.65 16 5 H 0.15 -1.79 8.14 -2.39 -0.02 -1.81 16 6 C -0.12 0.66 7.47 31.18 0.23 0.89 16 7 C 0.11 0.05 3.91 45.56 0.18 0.23 16 8 H 0.07 0.78 7.41 -2.39 -0.02 0.76 16 9 N -0.70 2.70 5.36 -439.84 -2.36 0.34 16 10 C 0.51 1.24 7.82 87.65 0.69 1.93 16 11 O -0.58 -8.25 15.64 -3.06 -0.05 -8.29 16 12 C -0.07 0.28 6.24 29.10 0.18 0.46 16 13 C 0.03 0.11 5.66 41.08 0.23 0.34 16 14 C -0.20 -1.13 10.77 22.14 0.24 -0.89 16 15 C -0.20 -1.11 9.37 22.14 0.21 -0.90 16 16 C -0.02 -0.11 6.50 41.08 0.27 0.16 16 17 C -0.06 -0.16 3.08 71.24 0.22 0.06 16 18 O -0.56 -2.39 12.88 -148.98 -1.92 -4.30 16 19 Si 0.80 0.43 30.58 68.60 2.10 2.53 16 20 N -0.54 -2.19 6.08 -171.11 -1.04 -3.23 16 21 C -0.12 0.43 7.19 31.10 0.22 0.66 16 22 H 0.42 -4.93 8.83 -92.71 -0.82 -5.75 16 23 H 0.40 -1.85 8.93 -92.70 -0.83 -2.68 16 24 H 0.13 -1.45 8.14 -2.39 -0.02 -1.47 16 25 H 0.06 -0.16 8.10 -2.39 -0.02 -0.18 16 26 H 0.42 -5.11 8.73 -92.71 -0.81 -5.92 16 27 H 0.13 -1.21 8.14 -2.39 -0.02 -1.23 16 28 H 0.15 -1.51 8.14 -2.38 -0.02 -1.53 16 29 H 0.14 0.44 8.06 -2.91 -0.02 0.41 16 30 H 0.15 0.27 6.22 -2.92 -0.02 0.25 16 31 H 0.11 0.31 7.96 -2.39 -0.02 0.29 16 32 H 0.39 -0.69 8.70 -74.05 -0.64 -1.34 16 33 H -0.29 -1.96 7.11 99.48 0.71 -1.25 16 34 H -0.28 -1.40 7.11 99.48 0.71 -0.69 16 35 H 0.42 0.45 8.96 -92.71 -0.83 -0.38 16 36 H 0.06 0.19 7.43 -2.39 -0.02 0.17 16 37 H 0.13 -1.44 8.12 -2.39 -0.02 -1.46 16 Total: 0.00 -32.91 319.94 -4.32 -37.23 By element: Atomic # 1 Polarization: -21.06 SS G_CDS: -2.73 Total: -23.79 kcal Atomic # 6 Polarization: 2.29 SS G_CDS: 3.26 Total: 5.56 kcal Atomic # 7 Polarization: 4.41 SS G_CDS: -4.94 Total: -0.53 kcal Atomic # 8 Polarization: -18.98 SS G_CDS: -2.02 Total: -21.00 kcal Atomic # 14 Polarization: 0.43 SS G_CDS: 2.10 Total: 2.53 kcal Total: -32.91 -4.32 -37.23 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_14644196.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.538 kcal (2) G-P(sol) polarization free energy of solvation -32.913 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.451 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.319 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.232 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.770 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds