Wall clock time and date at job start Thu Mar 4 2021 13:20:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34774 * 1 3 3 O 1.21277 * 120.00187 * 2 1 4 4 C 1.50697 * 119.99787 * 180.02562 * 2 1 3 5 5 H 1.09000 * 112.91063 * 48.74933 * 4 2 1 6 6 C 1.53786 * 113.61613 * 180.02562 * 4 2 1 7 7 C 1.53781 * 87.17350 * 89.15662 * 6 4 2 8 8 H 1.08997 * 113.61223 * 270.84552 * 7 6 4 9 9 N 1.46499 * 113.61225 * 139.93836 * 7 6 4 10 10 C 1.34783 * 119.99531 * 155.00207 * 9 7 6 11 11 O 1.21278 * 120.00062 * 359.97438 * 10 9 7 12 12 C 1.50703 * 119.99755 * 180.02562 * 10 9 7 13 13 C 1.53036 * 109.33063 * 180.85996 * 12 10 9 14 14 C 1.53561 * 108.55368 * 190.16073 * 13 12 10 15 15 N 1.47032 * 107.64652 * 60.97481 * 14 13 12 16 16 C 1.38923 * 118.88147 * 316.32359 * 15 14 13 17 17 C 1.31117 * 121.85018 * 13.30167 * 16 15 14 18 18 C 1.50699 * 118.54782 * 179.61478 * 17 16 15 19 19 O 1.42898 * 109.47134 * 250.01556 * 18 17 16 20 20 Si 1.86301 * 109.47355 * 10.01494 * 18 17 16 21 21 C 1.53782 * 87.08260 * 25.39213 * 7 6 4 22 22 H 0.96998 * 120.00410 * 179.97438 * 1 2 3 23 23 H 0.96999 * 119.99773 * 0.02562 * 1 2 3 24 24 H 1.09002 * 113.61357 * 334.56579 * 6 4 2 25 25 H 1.09002 * 113.61608 * 203.74741 * 6 4 2 26 26 H 0.96997 * 120.00777 * 335.00229 * 9 7 6 27 27 H 1.08998 * 109.32915 * 300.34835 * 12 10 9 28 28 H 1.09006 * 109.61996 * 309.89563 * 13 12 10 29 29 H 1.08999 * 109.61947 * 70.44431 * 13 12 10 30 30 H 1.09002 * 109.83515 * 301.43704 * 14 13 12 31 31 H 1.09002 * 109.81905 * 180.50770 * 14 13 12 32 32 H 0.96998 * 120.55846 * 136.30736 * 15 14 13 33 33 H 1.08006 * 119.08001 * 193.31197 * 16 15 14 34 34 H 1.09000 * 109.47477 * 130.01629 * 18 17 16 35 35 H 0.96708 * 113.99890 * 59.99722 * 19 18 17 36 36 H 1.48499 * 110.00383 * 180.02562 * 20 18 17 37 37 H 1.48499 * 109.99819 * 301.32518 * 20 18 17 38 38 H 1.08997 * 113.61668 * 89.11298 * 21 7 6 39 39 H 1.08998 * 113.61674 * 219.93807 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3051 -0.0006 5 1 1.7400 -2.0032 -0.7557 6 6 3.6295 -1.1342 0.0001 7 6 3.5510 -1.1212 1.5359 8 1 3.4032 -0.1268 1.9571 9 7 4.6368 -1.8599 2.1852 10 6 5.0076 -1.5461 3.4424 11 8 4.4428 -0.6519 4.0359 12 6 6.1249 -2.3057 4.1102 13 6 6.3268 -1.7669 5.5283 14 6 7.6204 -2.3662 6.0990 15 7 8.7298 -1.9363 5.2352 16 6 8.5633 -1.9815 3.8567 17 6 7.3842 -2.1456 3.3073 18 6 7.2881 -2.1746 1.8036 19 8 6.6340 -0.9898 1.3451 20 14 8.9999 -2.2610 1.0735 21 6 2.2512 -1.9312 1.3979 22 1 -0.4851 -0.8400 -0.0004 23 1 -0.4850 0.8401 -0.0004 24 1 3.9633 -0.1890 -0.4281 25 1 4.1652 -1.9939 -0.4024 26 1 5.0888 -2.5749 1.7104 27 1 5.8621 -3.3622 4.1623 28 1 6.4084 -0.6803 5.4989 29 1 5.4823 -2.0565 6.1535 30 1 7.5542 -3.4542 6.1017 31 1 7.7798 -2.0024 7.1141 32 1 9.5638 -1.6262 5.6213 33 1 9.4294 -1.8787 3.2197 34 1 6.7161 -3.0489 1.4928 35 1 7.0887 -0.1711 1.5863 36 1 8.9190 -2.2896 -0.4090 37 1 9.8002 -1.0908 1.5156 38 1 2.4088 -3.0096 1.3774 39 1 1.4728 -1.6305 2.0991 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_15608500.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:38 Heat of formation + Delta-G solvation = -47.753917 kcal Electronic energy + Delta-G solvation = -23529.391364 eV Core-core repulsion = 20053.820295 eV Total energy + Delta-G solvation = -3475.571069 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.141 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.85438 -41.03575 -39.25892 -38.24066 -37.59964 -34.75280 -34.27930 -33.16034 -32.66636 -27.73520 -26.84012 -26.68696 -25.46464 -23.21894 -22.76752 -21.64654 -20.33334 -19.30858 -18.92436 -18.18680 -18.07301 -17.88622 -17.35006 -17.02557 -16.28913 -16.05049 -15.86231 -15.73030 -15.41288 -14.99061 -14.97364 -14.48914 -14.19936 -13.95872 -13.84760 -13.40798 -13.20995 -13.17256 -12.95216 -12.69366 -12.17908 -11.86826 -11.75103 -11.63921 -11.60585 -11.36461 -11.01233 -10.73131 -10.63443 -10.33362 -9.73134 -8.41984 -4.84255 1.30087 1.43549 1.53056 1.63369 1.84440 2.06095 2.42699 2.53869 2.68968 3.45381 3.48055 3.53406 3.70085 3.80321 3.89326 3.92060 4.04723 4.24755 4.31288 4.36238 4.41107 4.57659 4.63902 4.70784 4.72298 4.82428 4.83632 4.88065 4.92616 5.06988 5.21873 5.25149 5.29522 5.48038 5.70763 5.83008 6.33863 6.42024 6.54948 6.75757 6.96546 7.29942 7.45119 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.836 5.836 2 C 0.523 3.477 3 O -0.595 6.595 4 C -0.133 4.133 5 H 0.145 0.855 6 C -0.111 4.111 7 C 0.123 3.877 8 H 0.064 0.936 9 N -0.677 5.677 10 C 0.525 3.475 11 O -0.604 6.604 12 C -0.036 4.036 13 C -0.120 4.120 14 C 0.124 3.876 15 N -0.747 5.747 16 C 0.155 3.845 17 C -0.289 4.289 18 C -0.062 4.062 19 O -0.539 6.539 20 Si 0.756 3.244 21 C -0.123 4.123 22 H 0.419 0.581 23 H 0.405 0.595 24 H 0.056 0.944 25 H 0.119 0.881 26 H 0.412 0.588 27 H 0.117 0.883 28 H 0.045 0.955 29 H 0.075 0.925 30 H 0.079 0.921 31 H 0.094 0.906 32 H 0.412 0.588 33 H 0.145 0.855 34 H 0.128 0.872 35 H 0.371 0.629 36 H -0.310 1.310 37 H -0.299 1.299 38 H 0.125 0.875 39 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.573 -10.402 0.442 10.530 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.308 3.692 3 O -0.476 6.476 4 C -0.155 4.155 5 H 0.163 0.837 6 C -0.149 4.149 7 C 0.017 3.983 8 H 0.083 0.917 9 N -0.329 5.329 10 C 0.313 3.687 11 O -0.486 6.486 12 C -0.057 4.057 13 C -0.159 4.159 14 C -0.001 4.001 15 N -0.377 5.377 16 C 0.032 3.968 17 C -0.300 4.300 18 C -0.172 4.172 19 O -0.345 6.345 20 Si 0.665 3.335 21 C -0.162 4.162 22 H 0.251 0.749 23 H 0.236 0.764 24 H 0.075 0.925 25 H 0.137 0.863 26 H 0.252 0.748 27 H 0.135 0.865 28 H 0.064 0.936 29 H 0.094 0.906 30 H 0.097 0.903 31 H 0.112 0.888 32 H 0.247 0.753 33 H 0.162 0.838 34 H 0.145 0.855 35 H 0.219 0.781 36 H -0.239 1.239 37 H -0.227 1.227 38 H 0.144 0.856 39 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 1.765 -9.361 0.188 9.528 hybrid contribution -0.505 1.708 -0.046 1.782 sum 1.261 -7.653 0.143 7.758 Atomic orbital electron populations 1.43736 1.06271 1.13803 1.76158 1.20688 0.83505 0.90992 0.73979 1.90753 1.69497 1.35570 1.51760 1.22298 0.96798 0.94700 1.01675 0.83728 1.23096 0.93716 1.03476 0.94643 1.22248 0.87476 0.95435 0.93119 0.91735 1.45848 1.35730 1.37224 1.14066 1.20950 0.83114 0.82737 0.81861 1.90669 1.57952 1.34074 1.65938 1.19724 0.91105 1.00705 0.94136 1.21674 0.98990 1.00135 0.95084 1.21689 0.84735 0.99589 0.94060 1.44693 1.17867 1.72049 1.03083 1.20698 0.96686 0.93880 0.85572 1.20472 0.92639 1.21558 0.95380 1.24884 1.09181 0.90347 0.92780 1.86733 1.52101 1.16090 1.79558 0.94544 0.74920 0.87403 0.76640 1.23454 0.97125 1.01930 0.93681 0.74905 0.76409 0.92548 0.86311 0.74798 0.86513 0.93625 0.90630 0.90287 0.88810 0.75263 0.83841 0.85455 0.78129 1.23898 1.22737 0.85649 0.91599 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 1.93 8.87 -173.54 -1.54 0.39 16 2 C 0.52 2.96 7.36 87.66 0.65 3.61 16 3 O -0.60 -10.18 16.60 -3.02 -0.05 -10.23 16 4 C -0.13 0.16 4.35 -10.95 -0.05 0.12 16 5 H 0.15 -1.21 8.14 -2.39 -0.02 -1.23 16 6 C -0.11 -0.24 7.20 31.12 0.22 -0.01 16 7 C 0.12 0.69 3.85 45.52 0.18 0.86 16 8 H 0.06 1.05 7.40 -2.39 -0.02 1.03 16 9 N -0.68 -1.66 3.02 -440.03 -1.33 -2.98 16 10 C 0.53 4.00 6.35 87.66 0.56 4.55 16 11 O -0.60 -11.09 15.40 -3.02 -0.05 -11.14 16 12 C -0.04 -0.02 2.74 -12.43 -0.03 -0.05 16 13 C -0.12 -0.22 4.92 30.79 0.15 -0.07 16 14 C 0.12 -0.57 7.16 86.47 0.62 0.05 16 15 N -0.75 3.55 5.83 -345.85 -2.02 1.53 16 16 C 0.15 -0.57 9.62 83.41 0.80 0.24 16 17 C -0.29 0.67 5.14 -16.76 -0.09 0.58 16 18 C -0.06 0.23 1.74 71.24 0.12 0.36 16 19 O -0.54 -0.95 9.48 -148.98 -1.41 -2.36 16 20 Si 0.76 -2.82 29.96 68.60 2.05 -0.76 16 21 C -0.12 0.16 7.46 31.18 0.23 0.39 16 22 H 0.42 -4.00 8.83 -92.71 -0.82 -4.82 16 23 H 0.41 -1.02 8.93 -92.71 -0.83 -1.85 16 24 H 0.06 0.52 7.43 -2.39 -0.02 0.50 16 25 H 0.12 -0.42 8.12 -2.39 -0.02 -0.44 16 26 H 0.41 -1.32 5.68 -92.71 -0.53 -1.85 16 27 H 0.12 -0.49 8.14 -2.39 -0.02 -0.51 16 28 H 0.04 0.40 7.75 -2.38 -0.02 0.38 16 29 H 0.08 0.17 8.14 -2.39 -0.02 0.15 16 30 H 0.08 -0.55 8.14 -2.39 -0.02 -0.57 16 31 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 32 H 0.41 -3.34 8.96 -92.71 -0.83 -4.17 16 33 H 0.14 -0.90 4.30 -2.91 -0.01 -0.91 16 34 H 0.13 -1.07 6.39 -2.39 -0.02 -1.08 16 35 H 0.37 0.54 8.70 -74.05 -0.64 -0.11 16 36 H -0.31 -1.50 7.11 99.48 0.71 -0.80 16 37 H -0.30 -0.52 6.84 99.48 0.68 0.16 16 38 H 0.13 -0.87 8.14 -2.39 -0.02 -0.89 16 39 H 0.07 0.06 8.10 -2.39 -0.02 0.04 16 Total: 0.00 -29.09 310.44 -3.47 -32.56 By element: Atomic # 1 Polarization: -15.13 SS G_CDS: -2.50 Total: -17.63 kcal Atomic # 6 Polarization: 7.26 SS G_CDS: 3.36 Total: 10.62 kcal Atomic # 7 Polarization: 3.82 SS G_CDS: -4.88 Total: -1.06 kcal Atomic # 8 Polarization: -22.22 SS G_CDS: -1.51 Total: -23.73 kcal Atomic # 14 Polarization: -2.82 SS G_CDS: 2.05 Total: -0.76 kcal Total: -29.09 -3.47 -32.56 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_15608500.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.191 kcal (2) G-P(sol) polarization free energy of solvation -29.090 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.281 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.473 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.563 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.754 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds