Wall clock time and date at job start Thu Mar 4 2021 13:20:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34772 * 1 3 3 O 1.21281 * 120.00221 * 2 1 4 4 C 1.50703 * 120.00072 * 180.02562 * 2 1 3 5 5 H 1.09002 * 112.84667 * 48.79806 * 4 2 1 6 6 C 1.53776 * 113.61482 * 179.97438 * 4 2 1 7 7 C 1.53785 * 87.07959 * 89.20227 * 6 4 2 8 8 H 1.08996 * 113.61288 * 270.79819 * 7 6 4 9 9 N 1.46504 * 113.61551 * 139.98220 * 7 6 4 10 10 C 1.34773 * 120.00087 * 155.00106 * 9 7 6 11 11 O 1.21626 * 120.00119 * 359.97438 * 10 9 7 12 12 C 1.47257 * 120.00054 * 179.97438 * 10 9 7 13 13 C 1.36332 * 126.97088 * 180.02562 * 12 10 9 14 14 C 1.51201 * 126.76311 * 0.03144 * 13 12 10 15 15 C 1.53392 * 108.15181 * 164.33767 * 14 13 12 16 16 C 1.53160 * 109.11241 * 48.44304 * 15 14 13 17 17 C 1.53126 * 109.52290 * 290.37688 * 16 15 14 18 18 N 1.35214 * 108.66529 * 179.97438 * 13 12 10 19 19 C 1.36431 * 109.89509 * 359.96069 * 18 13 12 20 20 C 1.50700 * 125.49325 * 180.02562 * 19 18 13 21 21 O 1.42904 * 109.46948 * 329.99921 * 20 19 18 22 22 Si 1.86302 * 109.47145 * 210.00125 * 20 19 18 23 23 C 1.34491 * 109.01259 * 0.03192 * 19 18 13 24 24 C 1.53774 * 113.68911 * 277.53457 * 4 2 1 25 25 H 0.96994 * 120.00193 * 180.02562 * 1 2 3 26 26 H 0.97003 * 120.00022 * 359.97438 * 1 2 3 27 27 H 1.08993 * 113.61868 * 334.65491 * 6 4 2 28 28 H 1.09004 * 113.69177 * 203.76086 * 6 4 2 29 29 H 0.97007 * 119.99549 * 334.99924 * 9 7 6 30 30 H 1.09004 * 109.80876 * 44.65117 * 14 13 12 31 31 H 1.09002 * 109.70428 * 283.97097 * 14 13 12 32 32 H 1.09002 * 109.54525 * 288.52966 * 15 14 13 33 33 H 1.08999 * 109.53833 * 168.35347 * 15 14 13 34 34 H 1.09004 * 109.46106 * 50.39644 * 16 15 14 35 35 H 1.09005 * 109.46114 * 170.36134 * 16 15 14 36 36 H 1.09004 * 109.56501 * 170.83574 * 17 16 15 37 37 H 1.09007 * 109.56464 * 291.05736 * 17 16 15 38 38 H 1.08998 * 109.47424 * 89.99734 * 20 19 18 39 39 H 0.96700 * 114.00230 * 300.00063 * 21 20 19 40 40 H 1.48497 * 109.99808 * 179.97438 * 22 20 19 41 41 H 1.48492 * 110.00144 * 301.31797 * 22 20 19 42 42 H 1.08001 * 126.81514 * 179.97438 * 23 19 18 43 43 H 1.09003 * 113.61639 * 156.32467 * 24 4 2 44 44 H 1.08997 * 113.61937 * 25.41686 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9542 1.0503 0.0000 4 6 2.1012 -1.3051 -0.0006 5 1 1.7398 -2.0021 -0.7567 6 6 3.6295 -1.1341 -0.0011 7 6 3.5498 -1.1219 1.5346 8 1 3.4023 -0.1277 1.9563 9 7 4.6357 -1.8601 2.1845 10 6 5.0053 -1.5466 3.4420 11 8 4.4378 -0.6506 4.0373 12 6 6.0964 -2.2889 4.0955 13 6 6.5826 -2.0930 5.3540 14 6 6.1067 -1.0681 6.3586 15 6 6.6506 -1.4623 7.7376 16 6 8.1471 -1.7659 7.6184 17 6 8.3448 -3.0624 6.8281 18 7 7.5807 -2.9781 5.5750 19 6 7.7598 -3.7608 4.4719 20 6 8.7791 -4.8625 4.3370 21 8 9.9225 -4.5540 5.1367 22 14 9.2928 -5.0181 2.5530 23 6 6.8800 -3.3906 3.5244 24 6 2.2503 -1.9331 1.3951 25 1 -0.4850 -0.8400 0.0004 26 1 -0.4850 0.8401 0.0004 27 1 3.9629 -0.1885 -0.4285 28 1 4.1662 -1.9932 -0.4037 29 1 5.0886 -2.5745 1.7096 30 1 5.0170 -1.0537 6.3837 31 1 6.4816 -0.0823 6.0836 32 1 6.1264 -2.3479 8.0969 33 1 6.4999 -0.6404 8.4375 34 1 8.6440 -0.9455 7.1006 35 1 8.5752 -1.8789 8.6145 36 1 9.4030 -3.1946 6.6024 37 1 7.9892 -3.9074 7.4179 38 1 8.3438 -5.8035 4.6732 39 1 10.3616 -3.7276 4.8931 40 1 10.2984 -6.1009 2.4066 41 1 8.1076 -5.3073 1.7065 42 1 6.7719 -3.8188 2.5389 43 1 2.4088 -3.0113 1.3742 44 1 1.4704 -1.6325 2.0948 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_16915396.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:40 Heat of formation + Delta-G solvation = -44.510998 kcal Electronic energy + Delta-G solvation = -27407.148523 eV Core-core repulsion = 23519.728178 eV Total energy + Delta-G solvation = -3887.420346 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.157 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.79938 -41.63886 -40.09382 -38.28787 -37.91603 -36.87461 -34.75214 -34.27631 -33.42148 -31.16804 -29.61199 -27.22093 -26.72101 -26.32249 -24.66317 -24.03997 -22.58675 -21.76662 -21.17224 -20.36150 -19.53085 -18.82802 -18.09926 -18.03478 -17.41955 -17.08573 -16.72270 -16.56140 -16.04166 -15.94540 -15.67757 -15.53060 -15.36070 -15.21979 -15.11409 -14.73137 -14.58341 -14.38473 -14.15586 -13.87907 -13.50196 -13.29689 -13.22304 -13.01050 -12.74134 -12.35065 -12.04729 -11.98019 -11.80949 -11.79347 -11.77295 -11.62708 -11.01380 -10.87408 -10.69071 -10.65063 -10.07325 -9.56726 -9.06206 -4.89373 0.70266 1.07200 1.39688 1.54939 1.68941 1.82348 2.04856 2.42932 2.50396 2.55597 3.32673 3.41836 3.46246 3.47139 3.58422 3.69442 3.77961 3.81011 3.82291 3.90919 4.13483 4.30323 4.33421 4.35505 4.40314 4.44383 4.56554 4.62764 4.70701 4.75534 4.79290 4.81183 4.84502 4.88718 4.96118 5.01134 5.02588 5.11724 5.20758 5.21628 5.58743 5.70724 5.85242 6.02920 6.21849 6.43697 6.60103 6.67204 7.31607 7.35402 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.523 3.477 3 O -0.593 6.593 4 C -0.129 4.129 5 H 0.147 0.853 6 C -0.119 4.119 7 C 0.113 3.887 8 H 0.076 0.924 9 N -0.703 5.703 10 C 0.586 3.414 11 O -0.593 6.593 12 C -0.256 4.256 13 C 0.105 3.895 14 C -0.054 4.054 15 C -0.125 4.125 16 C -0.133 4.133 17 C 0.095 3.905 18 N -0.424 5.424 19 C -0.009 4.009 20 C -0.046 4.046 21 O -0.552 6.552 22 Si 0.795 3.205 23 C -0.170 4.170 24 C -0.123 4.123 25 H 0.419 0.581 26 H 0.405 0.595 27 H 0.066 0.934 28 H 0.128 0.872 29 H 0.414 0.586 30 H 0.076 0.924 31 H 0.081 0.919 32 H 0.063 0.937 33 H 0.088 0.912 34 H 0.076 0.924 35 H 0.108 0.892 36 H 0.123 0.877 37 H 0.080 0.920 38 H 0.112 0.888 39 H 0.395 0.605 40 H -0.294 1.294 41 H -0.270 1.270 42 H 0.167 0.833 43 H 0.123 0.877 44 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.600 -5.688 -1.407 6.074 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.308 3.692 3 O -0.474 6.474 4 C -0.151 4.151 5 H 0.165 0.835 6 C -0.158 4.158 7 C 0.007 3.993 8 H 0.094 0.906 9 N -0.353 5.353 10 C 0.377 3.623 11 O -0.475 6.475 12 C -0.266 4.266 13 C -0.014 4.014 14 C -0.091 4.091 15 C -0.163 4.163 16 C -0.171 4.171 17 C -0.025 4.025 18 N -0.100 5.100 19 C -0.118 4.118 20 C -0.156 4.156 21 O -0.359 6.359 22 Si 0.698 3.302 23 C -0.193 4.193 24 C -0.162 4.162 25 H 0.250 0.750 26 H 0.236 0.764 27 H 0.085 0.915 28 H 0.146 0.854 29 H 0.252 0.748 30 H 0.095 0.905 31 H 0.099 0.901 32 H 0.082 0.918 33 H 0.107 0.893 34 H 0.094 0.906 35 H 0.126 0.874 36 H 0.140 0.860 37 H 0.098 0.902 38 H 0.129 0.871 39 H 0.245 0.755 40 H -0.221 1.221 41 H -0.196 1.196 42 H 0.184 0.816 43 H 0.141 0.859 44 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 1.835 -5.646 -1.103 6.038 hybrid contribution -1.028 -0.181 0.405 1.119 sum 0.807 -5.826 -0.699 5.924 Atomic orbital electron populations 1.43744 1.06329 1.13814 1.76116 1.20665 0.83498 0.90963 0.74028 1.90757 1.69439 1.35475 1.51726 1.22213 0.96661 0.94758 1.01467 0.83521 1.23260 0.94393 1.04365 0.93756 1.22540 0.87419 0.95859 0.93436 0.90589 1.45605 1.37133 1.38270 1.14322 1.17697 0.81520 0.81550 0.81539 1.90741 1.57666 1.33619 1.65500 1.19940 1.04658 1.05463 0.96497 1.20573 0.90933 0.94375 0.95491 1.20464 1.01108 0.95495 0.92070 1.21706 0.95995 1.02686 0.95916 1.21931 0.96600 0.96428 1.02106 1.22490 0.98265 0.99599 0.82104 1.44045 1.26769 1.26076 1.13079 1.20957 1.03475 0.99565 0.87827 1.25025 0.84762 0.95569 1.10220 1.86458 1.42025 1.47313 1.60145 0.93094 0.79731 0.85830 0.71546 1.21937 0.98345 0.98812 1.00252 1.23408 0.96961 1.01791 0.94027 0.74958 0.76363 0.91489 0.85393 0.74826 0.90527 0.90096 0.91788 0.89338 0.90576 0.87402 0.85956 0.90152 0.87055 0.75488 1.22123 1.19572 0.81590 0.85907 0.91512 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 2.87 8.87 -173.54 -1.54 1.33 16 2 C 0.52 2.11 7.36 87.66 0.65 2.76 16 3 O -0.59 -8.97 16.59 -3.03 -0.05 -9.02 16 4 C -0.13 0.38 4.34 -11.02 -0.05 0.33 16 5 H 0.15 -1.47 8.14 -2.39 -0.02 -1.49 16 6 C -0.12 0.07 7.20 31.12 0.22 0.30 16 7 C 0.11 0.51 3.90 45.54 0.18 0.69 16 8 H 0.08 1.06 7.40 -2.39 -0.02 1.04 16 9 N -0.70 -2.49 5.35 -443.37 -2.37 -4.86 16 10 C 0.59 6.28 7.81 86.61 0.68 6.96 16 11 O -0.59 -11.16 14.94 -4.11 -0.06 -11.23 16 12 C -0.26 -1.86 6.28 -19.12 -0.12 -1.98 16 13 C 0.10 0.66 6.57 41.75 0.27 0.94 16 14 C -0.05 -0.29 5.33 30.14 0.16 -0.13 16 15 C -0.13 0.09 5.97 30.78 0.18 0.27 16 16 C -0.13 0.59 5.92 30.69 0.18 0.77 16 17 C 0.09 -0.30 6.21 86.32 0.54 0.23 16 18 N -0.42 -0.68 3.11 -493.38 -1.53 -2.21 16 19 C -0.01 0.00 6.15 40.99 0.25 0.25 16 20 C -0.05 0.16 3.00 71.24 0.21 0.38 16 21 O -0.55 2.53 10.28 -148.98 -1.53 1.00 16 22 Si 0.80 -4.35 31.29 68.60 2.15 -2.21 16 23 C -0.17 -0.21 9.09 23.64 0.21 0.01 16 24 C -0.12 0.23 7.46 31.14 0.23 0.46 16 25 H 0.42 -4.34 8.83 -92.71 -0.82 -5.16 16 26 H 0.41 -1.46 8.93 -92.71 -0.83 -2.29 16 27 H 0.07 0.34 7.43 -2.39 -0.02 0.32 16 28 H 0.13 -0.95 8.12 -2.39 -0.02 -0.96 16 29 H 0.41 -1.25 7.85 -92.70 -0.73 -1.98 16 30 H 0.08 0.75 7.41 -2.38 -0.02 0.73 16 31 H 0.08 0.52 8.14 -2.39 -0.02 0.50 16 32 H 0.06 0.01 8.12 -2.39 -0.02 -0.01 16 33 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 34 H 0.08 -0.30 8.11 -2.38 -0.02 -0.32 16 35 H 0.11 -0.86 8.14 -2.38 -0.02 -0.88 16 36 H 0.12 -0.79 5.68 -2.38 -0.01 -0.80 16 37 H 0.08 -0.22 8.14 -2.38 -0.02 -0.24 16 38 H 0.11 -0.27 7.96 -2.39 -0.02 -0.29 16 39 H 0.39 -4.52 8.27 -74.06 -0.61 -5.14 16 40 H -0.29 -0.45 7.11 99.48 0.71 0.25 16 41 H -0.27 0.68 6.77 99.48 0.67 1.35 16 42 H 0.17 -0.63 6.30 -2.91 -0.02 -0.65 16 43 H 0.12 -0.81 8.14 -2.39 -0.02 -0.82 16 44 H 0.07 0.04 8.10 -2.39 -0.02 0.02 16 Total: 0.00 -28.99 354.27 -3.04 -32.04 By element: Atomic # 1 Polarization: -15.15 SS G_CDS: -1.90 Total: -17.05 kcal Atomic # 6 Polarization: 8.42 SS G_CDS: 3.81 Total: 12.22 kcal Atomic # 7 Polarization: -0.30 SS G_CDS: -5.45 Total: -5.75 kcal Atomic # 8 Polarization: -17.61 SS G_CDS: -1.64 Total: -19.25 kcal Atomic # 14 Polarization: -4.35 SS G_CDS: 2.15 Total: -2.21 kcal Total: -28.99 -3.04 -32.04 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_16915396.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.474 kcal (2) G-P(sol) polarization free energy of solvation -28.993 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.467 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.044 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.037 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.511 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds