Wall clock time and date at job start Thu Mar 4 2021 13:20:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.34774 * 1 3 3 O 1.21286 * 119.99698 * 2 1 4 4 C 1.50700 * 120.00002 * 180.02562 * 2 1 3 5 5 H 1.09005 * 112.84763 * 48.80430 * 4 2 1 6 6 C 1.53781 * 113.61600 * 179.97438 * 4 2 1 7 7 C 1.53781 * 87.07820 * 89.20092 * 6 4 2 8 8 H 1.09004 * 113.61402 * 270.80220 * 7 6 4 9 9 N 1.46496 * 113.61473 * 139.98533 * 7 6 4 10 10 C 1.34777 * 120.00266 * 156.53203 * 9 7 6 11 11 O 1.21274 * 120.00135 * 0.27234 * 10 9 7 12 12 C 1.50706 * 119.99766 * 179.97438 * 10 9 7 13 13 O 1.42906 * 109.46699 * 179.97438 * 12 10 9 14 14 C 1.35903 * 116.99515 * 179.97438 * 13 12 10 15 15 C 1.38712 * 120.05209 * 179.97438 * 14 13 12 16 16 C 1.50700 * 120.02724 * 359.97438 * 15 14 13 17 17 O 1.42901 * 109.46902 * 284.99416 * 16 15 14 18 18 Si 1.86300 * 109.46951 * 164.99494 * 16 15 14 19 19 C 1.38159 * 119.94563 * 180.02562 * 15 14 13 20 20 C 1.38255 * 120.05377 * 0.02562 * 19 15 14 21 21 C 1.38283 * 120.10890 * 0.02562 * 20 19 15 22 22 C 1.38119 * 120.05859 * 359.67988 * 21 20 19 23 23 C 1.53777 * 87.17201 * 25.38995 * 7 6 4 24 24 H 0.96999 * 120.00473 * 179.97438 * 1 2 3 25 25 H 0.97007 * 120.00115 * 359.97438 * 1 2 3 26 26 H 1.09006 * 113.61149 * 334.65361 * 6 4 2 27 27 H 1.08995 * 113.61591 * 203.74866 * 6 4 2 28 28 H 0.96999 * 119.99691 * 336.52188 * 9 7 6 29 29 H 1.09000 * 109.47161 * 299.99737 * 12 10 9 30 30 H 1.09001 * 109.46740 * 59.99879 * 12 10 9 31 31 H 1.09006 * 109.47166 * 44.99585 * 16 15 14 32 32 H 0.96695 * 114.00309 * 300.00070 * 17 16 15 33 33 H 1.48503 * 109.99958 * 179.97438 * 18 16 15 34 34 H 1.48500 * 110.00238 * 301.31668 * 18 16 15 35 35 H 1.07997 * 119.97551 * 179.97438 * 19 15 14 36 36 H 1.08000 * 119.94253 * 179.97438 * 20 19 15 37 37 H 1.08002 * 119.97218 * 179.97438 * 21 20 19 38 38 H 1.08001 * 120.03418 * 180.31411 * 22 21 20 39 39 H 1.09000 * 113.61385 * 89.16130 * 23 7 6 40 40 H 1.09003 * 113.61491 * 220.05355 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3477 0.0000 0.0000 3 8 1.9541 1.0504 0.0000 4 6 2.1012 -1.3051 -0.0006 5 1 1.7399 -2.0021 -0.7568 6 6 3.6295 -1.1341 -0.0011 7 6 3.5498 -1.1219 1.5346 8 1 3.4023 -0.1276 1.9562 9 7 4.6356 -1.8600 2.1844 10 6 4.9847 -1.5673 3.4529 11 8 4.3967 -0.6962 4.0580 12 6 6.1014 -2.3270 4.1215 13 8 6.2812 -1.8367 5.4517 14 6 7.2563 -2.4198 6.1975 15 6 7.4858 -1.9927 7.4971 16 6 6.6544 -0.8810 8.0835 17 8 7.0727 0.3688 7.5312 18 14 6.8770 -0.8483 9.9329 19 6 8.4780 -2.5867 8.2532 20 6 9.2422 -3.6055 7.7152 21 6 9.0160 -4.0323 6.4195 22 6 8.0212 -3.4459 5.6616 23 6 2.2499 -1.9319 1.3976 24 1 -0.4851 -0.8400 -0.0004 25 1 -0.4851 0.8401 0.0004 26 1 3.9629 -0.1884 -0.4286 27 1 4.1649 -1.9939 -0.4037 28 1 5.1033 -2.5595 1.7018 29 1 5.8501 -3.3871 4.1555 30 1 7.0233 -2.1900 3.5563 31 1 5.6037 -1.0494 7.8469 32 1 7.9995 0.5844 7.7033 33 1 6.0626 0.2442 10.5232 34 1 6.4754 -2.1537 10.5160 35 1 8.6574 -2.2542 9.2649 36 1 10.0176 -4.0683 8.3076 37 1 9.6145 -4.8281 6.0013 38 1 7.8416 -3.7830 4.6514 39 1 2.4075 -3.0103 1.3781 40 1 1.4712 -1.6296 2.0978 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_12220716_2989392.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:20:43 Heat of formation + Delta-G solvation = -91.299510 kcal Electronic energy + Delta-G solvation = -24729.251438 eV Core-core repulsion = 20897.621147 eV Total energy + Delta-G solvation = -3831.630291 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.130 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.89524 -41.43349 -40.42171 -38.74309 -38.16900 -37.48674 -34.88349 -34.51054 -32.72214 -31.27248 -29.65806 -26.82893 -26.76976 -26.65451 -23.73902 -22.78737 -22.59498 -21.75065 -20.36735 -19.50593 -18.53073 -18.12689 -18.04585 -17.96954 -17.50324 -17.19293 -16.85945 -16.59482 -16.10119 -15.89482 -15.68975 -15.43197 -15.34392 -15.00098 -14.92566 -14.37497 -14.22215 -13.80709 -13.67810 -13.44520 -13.31500 -13.10087 -13.01205 -12.36309 -12.19010 -12.08691 -11.91322 -11.78009 -11.71173 -11.09212 -11.00242 -10.74067 -10.39009 -10.21753 -9.95166 -9.21204 -5.06364 0.25257 0.42689 1.27715 1.35728 1.47570 1.50439 1.61290 1.94562 2.50583 2.58933 2.72363 3.33114 3.38113 3.49851 3.55058 3.68451 3.75755 3.84823 3.89026 3.97418 4.03524 4.13813 4.23221 4.32027 4.36850 4.49663 4.53403 4.65569 4.65962 4.75789 4.81327 4.95753 4.98732 5.03644 5.29712 5.39331 5.41369 5.54337 5.78124 5.80222 6.27011 6.39291 6.44794 6.80363 7.09056 7.27017 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.837 5.837 2 C 0.520 3.480 3 O -0.596 6.596 4 C -0.130 4.130 5 H 0.151 0.849 6 C -0.116 4.116 7 C 0.109 3.891 8 H 0.069 0.931 9 N -0.694 5.694 10 C 0.509 3.491 11 O -0.577 6.577 12 C 0.039 3.961 13 O -0.318 6.318 14 C 0.124 3.876 15 C -0.173 4.173 16 C -0.076 4.076 17 O -0.559 6.559 18 Si 0.798 3.202 19 C -0.079 4.079 20 C -0.153 4.153 21 C -0.076 4.076 22 C -0.213 4.213 23 C -0.122 4.122 24 H 0.420 0.580 25 H 0.405 0.595 26 H 0.065 0.935 27 H 0.136 0.864 28 H 0.425 0.575 29 H 0.127 0.873 30 H 0.123 0.877 31 H 0.077 0.923 32 H 0.391 0.609 33 H -0.305 1.305 34 H -0.279 1.279 35 H 0.157 0.843 36 H 0.155 0.845 37 H 0.155 0.845 38 H 0.154 0.846 39 H 0.132 0.868 40 H 0.063 0.937 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.638 -11.214 -3.959 12.436 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.400 5.400 2 C 0.305 3.695 3 O -0.477 6.477 4 C -0.152 4.152 5 H 0.169 0.831 6 C -0.154 4.154 7 C 0.004 3.996 8 H 0.087 0.913 9 N -0.349 5.349 10 C 0.295 3.705 11 O -0.456 6.456 12 C -0.039 4.039 13 O -0.231 6.231 14 C 0.078 3.922 15 C -0.174 4.174 16 C -0.184 4.184 17 O -0.366 6.366 18 Si 0.702 3.298 19 C -0.096 4.096 20 C -0.171 4.171 21 C -0.093 4.093 22 C -0.231 4.231 23 C -0.161 4.161 24 H 0.251 0.749 25 H 0.236 0.764 26 H 0.084 0.916 27 H 0.154 0.846 28 H 0.264 0.736 29 H 0.144 0.856 30 H 0.140 0.860 31 H 0.095 0.905 32 H 0.240 0.760 33 H -0.233 1.233 34 H -0.206 1.206 35 H 0.174 0.826 36 H 0.173 0.827 37 H 0.173 0.827 38 H 0.172 0.828 39 H 0.150 0.850 40 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges 2.617 -9.948 -2.930 10.696 hybrid contribution -1.082 0.043 -0.881 1.396 sum 1.535 -9.905 -3.811 10.724 Atomic orbital electron populations 1.43763 1.06381 1.13839 1.76038 1.20764 0.83533 0.91125 0.74033 1.90765 1.69472 1.35611 1.51807 1.22263 0.96701 0.94643 1.01560 0.83114 1.23272 0.94432 1.04669 0.93058 1.22591 0.87571 0.95761 0.93722 0.91260 1.45615 1.36994 1.39670 1.12579 1.20724 0.84102 0.83001 0.82673 1.90781 1.55570 1.34059 1.65148 1.22712 0.98827 0.99692 0.82672 1.86197 1.52088 1.59457 1.25334 1.19138 0.88862 0.93006 0.91151 1.19857 1.01924 1.02130 0.93479 1.25234 0.98529 0.83315 1.11343 1.86548 1.33593 1.35912 1.80560 0.94013 0.88493 0.76883 0.70372 1.21112 0.93272 0.95719 0.99476 1.21464 1.01311 0.97982 0.96376 1.21420 0.95537 0.98487 0.93889 1.21593 0.99775 0.98923 1.02855 1.23452 0.96536 1.02155 0.93927 0.74894 0.76418 0.91632 0.84550 0.73600 0.85560 0.85985 0.90545 0.76022 1.23321 1.20602 0.82555 0.82693 0.82743 0.82797 0.85012 0.91821 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.84 3.09 8.87 -173.53 -1.54 1.55 16 2 C 0.52 1.82 7.36 87.66 0.65 2.46 16 3 O -0.60 -8.96 16.59 -3.05 -0.05 -9.01 16 4 C -0.13 0.61 4.34 -10.96 -0.05 0.56 16 5 H 0.15 -1.83 8.14 -2.38 -0.02 -1.85 16 6 C -0.12 0.37 7.20 31.12 0.22 0.59 16 7 C 0.11 0.23 3.86 45.52 0.18 0.40 16 8 H 0.07 0.92 7.44 -2.39 -0.02 0.90 16 9 N -0.69 1.23 5.36 -440.05 -2.36 -1.13 16 10 C 0.51 3.48 7.91 87.66 0.69 4.18 16 11 O -0.58 -11.88 16.12 16.03 0.26 -11.62 16 12 C 0.04 0.01 5.22 71.24 0.37 0.38 16 13 O -0.32 -3.26 9.00 -73.42 -0.66 -3.92 16 14 C 0.12 0.74 6.66 22.51 0.15 0.89 16 15 C -0.17 -0.92 5.27 -19.77 -0.10 -1.03 16 16 C -0.08 -0.63 2.38 71.24 0.17 -0.46 16 17 O -0.56 -5.72 12.88 -148.98 -1.92 -7.64 16 18 Si 0.80 1.87 29.92 68.60 2.05 3.92 16 19 C -0.08 0.07 8.66 22.25 0.19 0.26 16 20 C -0.15 0.53 10.04 22.28 0.22 0.75 16 21 C -0.08 0.28 10.04 22.25 0.22 0.50 16 22 C -0.21 0.23 9.04 22.36 0.20 0.44 16 23 C -0.12 0.51 7.47 31.18 0.23 0.74 16 24 H 0.42 -4.56 8.83 -92.71 -0.82 -5.38 16 25 H 0.40 -1.42 8.93 -92.70 -0.83 -2.25 16 26 H 0.06 0.22 7.43 -2.38 -0.02 0.20 16 27 H 0.14 -1.54 8.11 -2.39 -0.02 -1.56 16 28 H 0.42 -4.83 8.71 -92.71 -0.81 -5.64 16 29 H 0.13 -0.92 7.65 -2.39 -0.02 -0.94 16 30 H 0.12 -0.74 7.67 -2.39 -0.02 -0.76 16 31 H 0.08 1.11 7.83 -2.38 -0.02 1.09 16 32 H 0.39 0.01 8.70 -74.06 -0.64 -0.63 16 33 H -0.30 -3.19 7.11 99.48 0.71 -2.48 16 34 H -0.28 -1.62 7.11 99.48 0.71 -0.91 16 35 H 0.16 -1.00 5.13 -2.91 -0.01 -1.02 16 36 H 0.16 -1.35 8.06 -2.91 -0.02 -1.37 16 37 H 0.15 -1.42 8.06 -2.91 -0.02 -1.44 16 38 H 0.15 -1.14 6.30 -2.91 -0.02 -1.16 16 39 H 0.13 -1.37 8.14 -2.39 -0.02 -1.39 16 40 H 0.06 -0.04 8.10 -2.39 -0.02 -0.06 16 Total: 0.00 -41.02 341.65 -2.80 -43.82 By element: Atomic # 1 Polarization: -24.71 SS G_CDS: -1.93 Total: -26.64 kcal Atomic # 6 Polarization: 7.31 SS G_CDS: 3.35 Total: 10.67 kcal Atomic # 7 Polarization: 4.32 SS G_CDS: -3.90 Total: 0.42 kcal Atomic # 8 Polarization: -29.82 SS G_CDS: -2.37 Total: -32.19 kcal Atomic # 14 Polarization: 1.87 SS G_CDS: 2.05 Total: 3.92 kcal Total: -41.02 -2.80 -43.82 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_12220716_2989392.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.479 kcal (2) G-P(sol) polarization free energy of solvation -41.022 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.501 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.799 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.820 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.300 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds